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fix variants assignment Clang Format Checker #113: Commit bf7de31 pushed by cmaceves
April 10, 2024 22:56 27s v_2.0
v_2.0
April 10, 2024 22:56 27s
starting engineering for consenseus call Clang Format Checker #112: Commit 5deec10 pushed by cmaceves
April 5, 2024 20:54 26s v_2.0
v_2.0
April 5, 2024 20:54 26s
changing the way means are set, removing excess code Clang Format Checker #111: Commit cf33fb4 pushed by cmaceves
March 29, 2024 21:23 34s v_2.0
v_2.0
March 29, 2024 21:23 34s
Merge pull request #176 from andersen-lab/cmake Clang Format Checker #110: Commit c8f464b pushed by cmaceves
March 26, 2024 18:46 32s v_2.0
v_2.0
March 26, 2024 18:46 32s
Removed faulty(?) initialization. Clang Format Checker #109: Commit f0f4cc7 pushed by gkarthik
March 25, 2024 00:22 33s cmake
cmake
March 25, 2024 00:22 33s
Corrected path to test files Clang Format Checker #108: Commit c41c8b5 pushed by gkarthik
March 25, 2024 00:20 29s cmake
cmake
March 25, 2024 00:20 29s
Init cmake Clang Format Checker #107: Commit 60b3678 pushed by gkarthik
March 25, 2024 00:18 33s cmake
cmake
March 25, 2024 00:18 33s
update prior to weekend Clang Format Checker #106: Commit bcdbbff pushed by cmaceves
March 22, 2024 19:46 28s v_2.0
v_2.0
March 22, 2024 19:46 28s
minor adjustments on determining centroids based on clustering Clang Format Checker #105: Commit 45e16fa pushed by cmaceves
March 2, 2024 03:09 26s v_2.0
v_2.0
March 2, 2024 03:09 26s
adding base for future consensus code, adjusting gmm metric Clang Format Checker #104: Commit 84187d7 pushed by cmaceves
February 28, 2024 20:25 29s v_2.0
v_2.0
February 28, 2024 20:25 29s
aic calculation Clang Format Checker #103: Commit 88f0418 pushed by cmaceves
February 1, 2024 22:37 25s v_2.0
v_2.0
February 1, 2024 22:37 25s
adding in population estimate Clang Format Checker #102: Commit 4600e33 pushed by cmaceves
February 1, 2024 18:50 30s v_2.0
v_2.0
February 1, 2024 18:50 30s
adding in better param values for contam Clang Format Checker #101: Commit fbae713 pushed by cmaceves
February 1, 2024 02:25 27s v_2.0
v_2.0
February 1, 2024 02:25 27s
splitting contam and consensus commands Clang Format Checker #100: Commit 90c3206 pushed by cmaceves
January 31, 2024 22:27 25s v_2.0
v_2.0
January 31, 2024 22:27 25s
minor updates prior to branch switch Clang Format Checker #99: Commit 9e8620d pushed by cmaceves
January 23, 2024 19:31 27s v_2.0
v_2.0
January 23, 2024 19:31 27s
minor update before switching systems Clang Format Checker #98: Commit ff631ba pushed by cmaceves
January 17, 2024 17:55 31s v_2.0
v_2.0
January 17, 2024 17:55 31s
object oriented variant assignment, outlier detection, starting to wr… Clang Format Checker #97: Commit ac060be pushed by cmaceves
January 17, 2024 01:56 25s v_2.0
v_2.0
January 17, 2024 01:56 25s
updating allele functions to account for allele being ref or not ref Clang Format Checker #96: Commit 1902ac0 pushed by cmaceves
January 16, 2024 21:58 34s v_2.0
v_2.0
January 16, 2024 21:58 34s
updating to mark alleles as ref/nonref Clang Format Checker #95: Commit 6e0a75d pushed by cmaceves
January 16, 2024 19:57 32s v_2.0
v_2.0
January 16, 2024 19:57 32s
saving for the day, adding in outlier detection and variant assignmen… Clang Format Checker #94: Commit 0dc8479 pushed by cmaceves
January 11, 2024 00:19 37s v_2.0
v_2.0
January 11, 2024 00:19 37s
adding gmm code, post gmm assignment Clang Format Checker #93: Commit 6989c5a pushed by cmaceves
January 10, 2024 00:34 32s v_2.0
v_2.0
January 10, 2024 00:34 32s
adding in variant parsing, and starting to build gmm Clang Format Checker #92: Commit 3f88cba pushed by cmaceves
January 8, 2024 22:40 30s v_2.0
v_2.0
January 8, 2024 22:40 30s
minor changes Clang Format Checker #91: Commit 72f4f75 pushed by cmaceves
December 15, 2023 18:21 28s v_2.0
v_2.0
December 15, 2023 18:21 28s
cleaning up handling on unpaired reads Clang Format Checker #90: Commit 7bd8db6 pushed by cmaceves
December 15, 2023 01:35 26s v_2.0
v_2.0
December 15, 2023 01:35 26s
first pass of handling unpaired reads Clang Format Checker #89: Commit 709164a pushed by cmaceves
December 14, 2023 23:27 31s v_2.0
v_2.0
December 14, 2023 23:27 31s