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[MNT] Fix certain workflow actions for forks and add button for resetting CI #1764

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MatthewMiddlehurst
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Hopefully fixes a number of workflows i.e. pre-commit checks for forks, as well as generally fixing automatic updates for contributors and pre-commit dependencies.

Adds a button to the PR comment for resetting CI.

Unfortunately, it's rather difficult to test some of these without actually running them after merge, but I have done my best to do so on a fork.

MatthewMiddlehurst and others added 14 commits July 3, 2024 13:20
* CI fun

* comments and token
* CI fun

* comments and token

* comments

* skip dirty check
* comment

* prs only

* comment
* comment

* correct branch
* comment

* branch
* [BUG] fix padder fit_values (aeon-toolkit#1752)

* fix padder

* declare var

* [DOC,MNT] Documentation updates and deprecation warning for `v1.0.0` (aeon-toolkit#1743)

* forecasting docs

* v1.0.0 mass deprecation message

* index fix

* installation

* typos

* comment

* pushing to forks is crazy

* dont create branches

* [MNT] Unit testing revamp part 1: `check_estimator` (aeon-toolkit#1479)

* remove no soft deps job and expand full no soft deps job

* no PR testing flag

* module soft deps

* is this actually returning an empty list

* import modules now

* clear out module soft dep

* check_estimator

* check_estimator updates

* import

* more complete functions and tests

* fix

* coverage and paramterize function test

* testing data start

* testing data start

* testing data cont

* real partial

* cont

* testing data changes

* examples revert

* fourier features

* Revert "fourier features"

This reverts commit 567c5e1.

* legacy skip

* init

* move to legacy

* example data update

* testing data

* imports

* examples

* testing update

* multiindex

* multiindex fixes

* multiindex returns

* test

* test

* docs, tests and fixes

* comments

* last bits

* refactor testing folder

* imports

* series generators

* fixes

* make_series legacy

* merge

* forecasting functions

* fixes

* fixes

* fixes

* testing

* examples

* convert checks

* fixes

* docs

* ad datasets

* more docs

* forecasting compose

* forecasting

* delete forecasting api docs

* docs

* revert and comment init

* imports

* import test

* uncomment

* docstrings

* no imports

* package name

* import

* docstring

* fixes

* remove legacy and doc fix

* [ENH] Channel selection rocket wrapper (aeon-toolkit#1504)

* base channel selector

* base channel selector

* random channel selector

* elbow class test

* random channel selector

* base channel selector

* base channel selector

* revert registry

* draft channel selector

* class method

* test channel scorer

* docstring

* remove unnecessary ExponentTransform import

* deprecate DateTime

* Revert "deprecate DateTime"

This reverts commit 98b29e6.

* channel selection

* remove dependency

* move tests to fit

* move tests to fit

* channel scorer test

* add to API

* maint

* maint

---------

Co-authored-by: Tony Bagnall <ajb@uea.ac.uk>
* comment

* remove branch param

* fixes
* comment

* repo and branch

* comment
* [BUG] fix padder fit_values (aeon-toolkit#1752)

* fix padder

* declare var

* [DOC,MNT] Documentation updates and deprecation warning for `v1.0.0` (aeon-toolkit#1743)

* forecasting docs

* v1.0.0 mass deprecation message

* index fix

* installation

* typos

* [MNT] Unit testing revamp part 1: `check_estimator` (aeon-toolkit#1479)

* remove no soft deps job and expand full no soft deps job

* no PR testing flag

* module soft deps

* is this actually returning an empty list

* import modules now

* clear out module soft dep

* check_estimator

* check_estimator updates

* import

* more complete functions and tests

* fix

* coverage and paramterize function test

* testing data start

* testing data start

* testing data cont

* real partial

* cont

* testing data changes

* examples revert

* fourier features

* Revert "fourier features"

This reverts commit 567c5e1.

* legacy skip

* init

* move to legacy

* example data update

* testing data

* imports

* examples

* testing update

* multiindex

* multiindex fixes

* multiindex returns

* test

* test

* docs, tests and fixes

* comments

* last bits

* refactor testing folder

* imports

* series generators

* fixes

* make_series legacy

* merge

* forecasting functions

* fixes

* fixes

* fixes

* testing

* examples

* convert checks

* fixes

* docs

* ad datasets

* more docs

* forecasting compose

* forecasting

* delete forecasting api docs

* docs

* revert and comment init

* imports

* import test

* uncomment

* docstrings

* no imports

* package name

* import

* docstring

* fixes

* remove legacy and doc fix

* [ENH] Channel selection rocket wrapper (aeon-toolkit#1504)

* base channel selector

* base channel selector

* random channel selector

* elbow class test

* random channel selector

* base channel selector

* base channel selector

* revert registry

* draft channel selector

* class method

* test channel scorer

* docstring

* remove unnecessary ExponentTransform import

* deprecate DateTime

* Revert "deprecate DateTime"

This reverts commit 98b29e6.

* channel selection

* remove dependency

* move tests to fit

* move tests to fit

* channel scorer test

* add to API

* [DEP] Exclusion list  (aeon-toolkit#1730)

* remove dependency

* excluded list

* [MNT] Removing `tensorflow_addons` dependency (aeon-toolkit#1421)

* tensorflow bound

* add manually instance normalization

* empty commit

* fix doxs

* fix bug

* add maintainer

* re arrange

* dep on utils

* fix comments

* add version and file to header

* re add conflict

* remove addon

* only adodn remove

* add typeguard dep

* remove addons from test

* remove tag of python<3.12 from base class

* edit pyptoject for test details

* remove typeguard

* remove addons

* remove typeguard

* fix bug in python version

* remove config on python < 3.12

* remove python version from test

* remove python version from base

* use group norm

* re-add 3.12 limit

* remove tags and add python version

* skip random state clr test

* fix test all networks

* set y for channel selection test

* set y for channel selection test

---------

Co-authored-by: hadifawaz1999 <hadifawaz2291999@gmail.com>
Co-authored-by: Tony Bagnall <ajb@uea.ac.uk>

* comment

* Empty commit for CI

* uncomment

---------

Co-authored-by: Tony Bagnall <ajb@uea.ac.uk>
Co-authored-by: hadifawaz1999 <hadifawaz2291999@gmail.com>
Co-authored-by: MatthewMiddlehurst <MatthewMiddlehurst@users.noreply.github.com>
# Conflicts:
#	.github/workflows/pr_precommit.yml
@MatthewMiddlehurst MatthewMiddlehurst requested a review from a team as a code owner July 4, 2024 14:45
@aeon-actions-bot aeon-actions-bot bot added the maintenance Continuous integration, unit testing & package distribution label Jul 4, 2024
@aeon-actions-bot
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Thank you for contributing to aeon

I have added the following labels to this PR based on the title: [ $\color{#EC843A}{\textsf{maintenance}}$ ].

The Checks tab will show the status of our automated tests. You can click on individual test runs in the tab or "Details" in the panel below to see more information if there is a failure.

If our pre-commit code quality check fails, any trivial fixes will automatically be pushed to your PR unless it is a draft.

Don't hesitate to ask questions on the aeon Slack channel if you have any.

PR CI actions

These checkboxes will add labels to enable/disable CI functionality for this PR. This may not take effect immediately, and a new commit may be required to run the new configuration.

  • Run pre-commit checks for all files
  • Run all pytest tests and configurations
  • Run all notebook example tests
  • Run numba-disabled codecov tests
  • Stop automatic pre-commit fixes (always disabled for drafts)

@MatthewMiddlehurst MatthewMiddlehurst merged commit 027d651 into aeon-toolkit:main Jul 9, 2024
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2 participants