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@@ -1,98 +1,4 @@ | ||
set(CMAKE_POSITION_INDEPENDENT_CODE ON) | ||
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####### Acquire Zarr Streaming Library ####### | ||
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set(tgt acquire-zarr) | ||
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add_library(${tgt} STATIC | ||
include/zarr.h | ||
internal/logger.hh | ||
internal/logger.cpp | ||
internal/stream.settings.hh | ||
internal/stream.settings.cpp | ||
internal/zarr.stream.hh | ||
internal/zarr.stream.cpp | ||
internal/zarr.common.hh | ||
internal/zarr.common.cpp | ||
internal/thread.pool.hh | ||
internal/thread.pool.cpp | ||
internal/s3.connection.hh | ||
internal/s3.connection.cpp | ||
internal/blosc.compression.params.hh | ||
internal/blosc.compression.params.cpp | ||
internal/sink.hh | ||
internal/file.sink.hh | ||
internal/file.sink.cpp | ||
internal/s3.sink.hh | ||
internal/s3.sink.cpp | ||
internal/sink.creator.hh | ||
internal/sink.creator.cpp | ||
internal/array.writer.hh | ||
internal/array.writer.cpp | ||
internal/zarrv2.array.writer.hh | ||
internal/zarrv2.array.writer.cpp | ||
internal/zarrv3.array.writer.hh | ||
internal/zarrv3.array.writer.cpp | ||
) | ||
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target_include_directories(${tgt} | ||
PUBLIC | ||
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include> | ||
PRIVATE | ||
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/internal> | ||
) | ||
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target_link_libraries(${tgt} PRIVATE | ||
blosc_static | ||
miniocpp::miniocpp | ||
) | ||
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set_target_properties(${tgt} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
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install(TARGETS ${tgt} | ||
LIBRARY DESTINATION lib | ||
ARCHIVE DESTINATION lib | ||
) | ||
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# Install public header files | ||
install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/include/ | ||
DESTINATION include | ||
FILES_MATCHING PATTERN "*.h" | ||
) | ||
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####### Acquire Zarr Driver ####### | ||
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if (NOT TARGET acquire-core-logger) | ||
add_subdirectory(${CMAKE_SOURCE_DIR}/acquire-common/acquire-core-libs ${CMAKE_CURRENT_BINARY_DIR}/acquire-core-libs) | ||
endif () | ||
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set(tgt-driver acquire-driver-zarr) | ||
add_library(${tgt-driver} MODULE | ||
driver/zarr.storage.hh | ||
driver/zarr.storage.cpp | ||
driver/zarr.driver.c | ||
) | ||
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target_include_directories(${tgt-driver} PRIVATE | ||
$<BUILD_INTERFACE:${CMAKE_SOURCE_DIR}/src> | ||
) | ||
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target_enable_simd(${tgt-driver}) | ||
target_link_libraries(${tgt-driver} PRIVATE | ||
acquire-core-logger | ||
acquire-core-platform | ||
acquire-device-kit | ||
acquire-device-properties | ||
${tgt} | ||
blosc_static | ||
nlohmann_json::nlohmann_json | ||
miniocpp::miniocpp | ||
) | ||
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set_target_properties(${tgt-driver} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
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install(TARGETS ${tgt-driver} LIBRARY DESTINATION lib) | ||
add_subdirectory(streaming) | ||
add_subdirectory(driver) |
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option(BUILD_ACQUIRE_DRIVER_ZARR ON) | ||
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if (BUILD_ACQUIRE_DRIVER_ZARR) | ||
if (NOT TARGET acquire-core-logger) | ||
add_subdirectory(${CMAKE_SOURCE_DIR}/acquire-common/acquire-core-libs ${CMAKE_CURRENT_BINARY_DIR}/acquire-core-libs) | ||
endif () | ||
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set(tgt acquire-driver-zarr) | ||
add_library(${tgt} MODULE | ||
zarr.storage.hh | ||
zarr.storage.cpp | ||
zarr.driver.c | ||
) | ||
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target_include_directories(${tgt} PRIVATE | ||
$<BUILD_INTERFACE:${CMAKE_SOURCE_DIR}/src> | ||
) | ||
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target_enable_simd(${tgt}) | ||
target_link_libraries(${tgt} PRIVATE | ||
acquire-core-logger | ||
acquire-core-platform | ||
acquire-device-kit | ||
acquire-device-properties | ||
acquire-zarr | ||
blosc_static | ||
nlohmann_json::nlohmann_json | ||
miniocpp::miniocpp | ||
) | ||
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set_target_properties(${tgt} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
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install(TARGETS ${tgt} LIBRARY DESTINATION lib) | ||
endif () |
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@@ -0,0 +1,58 @@ | ||
set(tgt acquire-zarr) | ||
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add_library(${tgt} | ||
logger.hh | ||
logger.cpp | ||
stream.settings.hh | ||
stream.settings.cpp | ||
zarr.stream.hh | ||
zarr.stream.cpp | ||
zarr.common.hh | ||
zarr.common.cpp | ||
thread.pool.hh | ||
thread.pool.cpp | ||
s3.connection.hh | ||
s3.connection.cpp | ||
blosc.compression.params.hh | ||
blosc.compression.params.cpp | ||
sink.hh | ||
file.sink.hh | ||
file.sink.cpp | ||
s3.sink.hh | ||
s3.sink.cpp | ||
sink.creator.hh | ||
sink.creator.cpp | ||
array.writer.hh | ||
array.writer.cpp | ||
zarrv2.array.writer.hh | ||
zarrv2.array.writer.cpp | ||
zarrv3.array.writer.hh | ||
zarrv3.array.writer.cpp | ||
) | ||
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target_include_directories(${tgt} | ||
PUBLIC | ||
$<BUILD_INTERFACE:${CMAKE_SOURCE_DIR}/include> | ||
PRIVATE | ||
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}> | ||
) | ||
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target_link_libraries(${tgt} PRIVATE | ||
blosc_static | ||
miniocpp::miniocpp | ||
) | ||
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set_target_properties(${tgt} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
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install(TARGETS ${tgt} | ||
LIBRARY DESTINATION lib | ||
ARCHIVE DESTINATION lib | ||
) | ||
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# Install public header files | ||
install(DIRECTORY ${CMAKE_SOURCE_DIR}/include/ | ||
DESTINATION include | ||
FILES_MATCHING PATTERN "*.h" | ||
) |
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Original file line number | Diff line number | Diff line change |
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@@ -1,84 +1,86 @@ | ||
set(NOTEST "TRUE") | ||
add_subdirectory(${CMAKE_SOURCE_DIR}/acquire-common ${CMAKE_CURRENT_BINARY_DIR}/acquire-common) | ||
set(NOTEST "FALSE") | ||
if (BUILD_ACQUIRE_DRIVER_ZARR) | ||
set(NOTEST "TRUE") | ||
add_subdirectory(${CMAKE_SOURCE_DIR}/acquire-common ${CMAKE_CURRENT_BINARY_DIR}/acquire-common) | ||
set(NOTEST "FALSE") | ||
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# | ||
# PARAMETERS | ||
# | ||
set(project acquire-driver-zarr) # CMAKE_PROJECT_NAME gets overridden if this is a subtree of another project | ||
# | ||
# PARAMETERS | ||
# | ||
set(project acquire-driver-zarr) # CMAKE_PROJECT_NAME gets overridden if this is a subtree of another project | ||
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# | ||
# Tests | ||
# | ||
set(tests | ||
list-devices | ||
get | ||
get-meta | ||
get-set-get | ||
external-metadata-with-whitespace-ok | ||
restart-stopped-zarr-resets-threadpool | ||
repeat-start | ||
metadata-dimension-sizes | ||
write-zarr-v2-raw | ||
write-zarr-v2-raw-chunk-size-larger-than-frame-size | ||
write-zarr-v2-raw-with-even-chunking | ||
write-zarr-v2-raw-with-even-chunking-and-rollover | ||
write-zarr-v2-raw-with-ragged-chunking | ||
write-zarr-v2-with-lz4-compression | ||
write-zarr-v2-with-zstd-compression | ||
write-zarr-v2-compressed-with-chunking | ||
write-zarr-v2-compressed-with-chunking-and-rollover | ||
write-zarr-v2-raw-multiscale | ||
write-zarr-v2-raw-multiscale-with-trivial-tile-size | ||
write-zarr-v2-compressed-multiscale | ||
write-zarr-v2-to-s3 | ||
multiscales-metadata | ||
write-zarr-v3-raw | ||
write-zarr-v3-raw-with-ragged-sharding | ||
write-zarr-v3-raw-chunk-exceeds-array | ||
write-zarr-v3-compressed | ||
write-zarr-v3-raw-multiscale | ||
write-zarr-v3-to-s3 | ||
) | ||
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foreach (name ${tests}) | ||
set(tgt "${project}-${name}") | ||
add_executable(${tgt} ${name}.cpp) | ||
target_compile_definitions(${tgt} PUBLIC "TEST=\"${tgt}\"") | ||
set_target_properties(${tgt} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
target_include_directories(${tgt} PRIVATE "${CMAKE_CURRENT_LIST_DIR}/../") | ||
target_link_libraries(${tgt} | ||
acquire-core-logger | ||
acquire-core-platform | ||
acquire-video-runtime | ||
nlohmann_json::nlohmann_json | ||
miniocpp::miniocpp | ||
# | ||
# Tests | ||
# | ||
set(tests | ||
list-devices | ||
get | ||
get-meta | ||
get-set-get | ||
external-metadata-with-whitespace-ok | ||
restart-stopped-zarr-resets-threadpool | ||
repeat-start | ||
metadata-dimension-sizes | ||
write-zarr-v2-raw | ||
write-zarr-v2-raw-chunk-size-larger-than-frame-size | ||
write-zarr-v2-raw-with-even-chunking | ||
write-zarr-v2-raw-with-even-chunking-and-rollover | ||
write-zarr-v2-raw-with-ragged-chunking | ||
write-zarr-v2-with-lz4-compression | ||
write-zarr-v2-with-zstd-compression | ||
write-zarr-v2-compressed-with-chunking | ||
write-zarr-v2-compressed-with-chunking-and-rollover | ||
write-zarr-v2-raw-multiscale | ||
write-zarr-v2-raw-multiscale-with-trivial-tile-size | ||
write-zarr-v2-compressed-multiscale | ||
write-zarr-v2-to-s3 | ||
multiscales-metadata | ||
write-zarr-v3-raw | ||
write-zarr-v3-raw-with-ragged-sharding | ||
write-zarr-v3-raw-chunk-exceeds-array | ||
write-zarr-v3-compressed | ||
write-zarr-v3-raw-multiscale | ||
write-zarr-v3-to-s3 | ||
) | ||
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add_test(NAME test-${tgt} COMMAND ${tgt}) | ||
set_tests_properties(test-${tgt} PROPERTIES LABELS "anyplatform;acquire-driver-zarr") | ||
endforeach () | ||
foreach (name ${tests}) | ||
set(tgt "${project}-${name}") | ||
add_executable(${tgt} ${name}.cpp) | ||
target_compile_definitions(${tgt} PUBLIC "TEST=\"${tgt}\"") | ||
set_target_properties(${tgt} PROPERTIES | ||
MSVC_RUNTIME_LIBRARY "MultiThreaded$<$<CONFIG:Debug>:Debug>" | ||
) | ||
target_include_directories(${tgt} PRIVATE "${CMAKE_CURRENT_LIST_DIR}/../") | ||
target_link_libraries(${tgt} | ||
acquire-core-logger | ||
acquire-core-platform | ||
acquire-video-runtime | ||
nlohmann_json::nlohmann_json | ||
miniocpp::miniocpp | ||
) | ||
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add_test(NAME test-${tgt} COMMAND ${tgt}) | ||
set_tests_properties(test-${tgt} PROPERTIES LABELS "anyplatform;acquire-driver-zarr") | ||
endforeach () | ||
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# | ||
# Copy driver to tests | ||
# | ||
list(POP_FRONT tests onename) | ||
# | ||
# Copy driver to tests | ||
# | ||
list(POP_FRONT tests onename) | ||
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foreach (driver | ||
acquire-driver-common | ||
acquire-driver-zarr | ||
) | ||
add_custom_target(${project}-copy-${driver}-for-tests | ||
COMMAND ${CMAKE_COMMAND} -E copy | ||
$<TARGET_FILE:${driver}> | ||
$<TARGET_FILE_DIR:${project}-${onename}> | ||
DEPENDS ${driver} | ||
COMMENT "Copying ${driver} to $<TARGET_FILE_DIR:${project}-${onename}>" | ||
foreach (driver | ||
acquire-driver-common | ||
acquire-driver-zarr | ||
) | ||
add_custom_target(${project}-copy-${driver}-for-tests | ||
COMMAND ${CMAKE_COMMAND} -E copy | ||
$<TARGET_FILE:${driver}> | ||
$<TARGET_FILE_DIR:${project}-${onename}> | ||
DEPENDS ${driver} | ||
COMMENT "Copying ${driver} to $<TARGET_FILE_DIR:${project}-${onename}>" | ||
) | ||
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foreach (name ${tests}) | ||
add_dependencies(${tgt} ${project}-copy-${driver}-for-tests) | ||
foreach (name ${tests}) | ||
add_dependencies(${tgt} ${project}-copy-${driver}-for-tests) | ||
endforeach () | ||
endforeach () | ||
endforeach () | ||
endif () |
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