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Hi, I am wondering why there are two parameters for nearest neighbours in weight matrix calculation.
SpatialDM/spatialdm/main.py
Line 34 in aa17624
It seems to me that there is no need for both or am I missing sth?
Best
The text was updated successfully, but these errors were encountered:
n_neighbors is for secreted (long-distance) signaling, while n_nearest_neighbors is for adjacent signaling (ECM or cell-cell contact).
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Hi, I am wondering why there are two parameters for nearest neighbours in weight matrix calculation.
SpatialDM/spatialdm/main.py
Line 34 in aa17624
It seems to me that there is no need for both or am I missing sth?
Best
The text was updated successfully, but these errors were encountered: