CI cleanup; All CI workflows are required to pass before merge to develop.

.github/workflows/Intel.yml

@@ -0,0 +1,59 @@
+name: Intel
+on:
+  push:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+  pull_request:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+
+# Use custom shell with -l so .bash_profile is sourced which loads intel/oneapi/setvars.sh
+# without having to do it in manually every step
+defaults:
+  run:
+    shell: bash -leo pipefail {0}
+
+jobs:
+  Intel:
+    runs-on: ubuntu-latest
+    env:
+      CC: icc
+      FC: ifort
+
+    steps:
+
+    # See https://software.intel.com/content/www/us/en/develop/articles/oneapi-repo-instructions.html
+    - name: install-intel
+      run: |
+        cd /tmp
+        wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
+        sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
+        rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
+        echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
+        sudo apt-get update
+        sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-mpi-devel intel-oneapi-openmp intel-oneapi-compiler-fortran intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
+        echo "source /opt/intel/oneapi/setvars.sh" >> ~/.bash_profile
+
+    - name: checkout
+      uses: actions/checkout@v2
+      with:
+        path: bufr
+        submodules: true
+
+    - name: build
+      run: |
+        cd bufr
+        mkdir build
+        cd build
+        cmake -DCMAKE_INSTALL_PREFIX=./install -DENABLE_PYTHON=OFF ..
+        make -j2 VERBOSE=1
+        make install
+
+    - name: test-bufr
+      run: |
+        cd bufr/build
+        ctest --verbose --output-on-failure --rerun-failed

.github/workflows/Linux.yml

@@ -0,0 +1,61 @@
+name: Linux
+on:
+  push:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+  pull_request:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+
+jobs:
+  Linux:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        ccompiler: [clang, gcc-9, gcc-10]
+
+    steps:
+
+    - name: install-deps
+      run: |
+       sudo apt-get update
+       sudo apt-get install python3-pip python3-dev python3-numpy
+       sudo python3 -m pip install -U pip setuptools
+       sudo python3 -m pip install -U numpy
+       sudo python3 -m pip install -U netCDF4
+       sudo python3 -m pip install -U pdoc
+
+    - name: checkout
+      uses: actions/checkout@v2
+      with:
+        path: bufr
+        submodules: true
+
+    - name: build
+      run: |
+        if [[ ${{ matrix.ccompiler }} == "clang" ]]; then
+          export CC=clang
+        elif [[ ${{ matrix.ccompiler }} == "gcc-9" ]]; then
+          export CC=gcc-9
+          export FC=gfortran-9
+        elif [[ ${{ matrix.ccompiler }} == "gcc-10" ]]; then
+          export CC=gcc-10
+          export FC=gfortran-10
+        fi
+        cd bufr
+        mkdir build
+        cd build
+        cmake -DCMAKE_INSTALL_PREFIX=./install -DENABLE_PYTHON=ON ..
+        make -j2 VERBOSE=1
+        make install
+        cd python
+        sudo python3 setup.py install
+
+    - name: test
+      run: |
+        cd $GITHUB_WORKSPACE/bufr/build
+        ctest --verbose --output-on-failure --rerun-failed

.github/workflows/MacOS.yml

@@ -0,0 +1,53 @@
+name: MacOS
+on:
+  push:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+  pull_request:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+
+jobs:
+  MacOS:
+    runs-on: macos-latest
+    env:
+      FC: gfortran-11
+
+    steps:
+
+    - name: install-deps
+      run: |
+        brew update
+        brew install doxygen
+        pip3 install setuptools
+        pip3 install numpy
+        pip3 install netCDF4
+        sudo ln -sf /usr/local/bin/gfortran-11 /usr/local/bin/gfortran
+
+    - name: checkout-bufr
+      uses: actions/checkout@v2
+      with: 
+        path: bufr
+
+    - name: build-bufr
+      run: |
+        cd bufr
+        mkdir build 
+        cd build
+        cmake ..
+        make -j2 VERBOSE=1
+        cmake -DCMAKE_INSTALL_PREFIX=./install -DENABLE_PYTHON=ON ..
+        make -j2 VERBOSE=1
+        make install
+        cd python
+        sudo python3 setup.py install
+
+    - name: test-bufr
+      run: |
+        cd bufr/build
+        ctest --verbose --output-on-failure --rerun-failed
+

.github/workflows/main_new.yml → .github/workflows/developer.yml

@@ -1,8 +1,18 @@
-name: code coverage
-on: [push, pull_request]
+name: developer
+on:
+  push:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
+  pull_request:
+    branches:
+    - develop
+    paths-ignore:
+    - README.md
 
 jobs:
-  build:
+  developer:
     runs-on: ubuntu-latest
     env:
       FC: gfortran-10
@@ -33,18 +43,23 @@ jobs:
         cd bufr
         mkdir build
         cd build
-        cmake -DCMAKE_INSTALL_PREFIX=./install -DCMAKE_Fortran_FLAGS="-g -fprofile-arcs -ftest-coverage -fprofile-abs-path -O0" ..
-        make -j2
+        cmake -DCMAKE_INSTALL_PREFIX=./install -DCMAKE_Fortran_FLAGS="-g -fprofile-arcs -ftest-coverage -fprofile-abs-path -O0" -DCMAKE_BUILD_TYPE=Debug -DENABLE_DOCS=On -DENABLE_PYTHON=ON ..
+        make -j2 VERBOSE=1
         make install
+        cd python
+        sudo python3 setup.py install
 
     - name: test
       run: |
         cd $GITHUB_WORKSPACE/bufr/build
-        ctest --output-on-failure
-        gcovr -r .. --html-details -o test-coverage.html
+        ctest --verbose --output-on-failure --rerun-failed
+        gcovr --root .. -v  --html-details --exclude ../tests --exclude CMakeFiles --print-summary -o test-coverage.html
 
     - uses: actions/upload-artifact@v2
       with:
         name: test-coverage
-        path: bufr/build/*.html
+        path: |
+          bufr/build/*.html
+          bufr/build/*.css
+