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update to MOM6 main branch 20211019 commit #78

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Oct 28, 2021
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7bbc309
Replace MOM_control_struct pointers as locals
marshallward Jun 16, 2021
750089b
Merge remote-tracking branch 'marshall/mom_cs_to_stack' into dev/esmg
kshedstrom Jun 16, 2021
a61c43a
Replace MOM_control_struct pointers as locals
marshallward Jun 16, 2021
13f5e12
Merge https://github.com/OlgaSergienko/MOM6 into ice_dynamics
OlgaSergienko Jun 17, 2021
457c499
increased a number of iterations in solver for non-linear viscosity
OlgaSergienko Jun 17, 2021
0267d08
Merge branch 'ice_dynamics' of https://github.com/OlgaSergienko/MOM6 …
OlgaSergienko Jun 17, 2021
347e147
Merge branch 'NOAA-GFDL:dev/gfdl' into dev/gfdl
OlgaSergienko Jun 17, 2021
ffbd82a
Performance monitoring; GitHub integration
marshallward Apr 29, 2021
825401c
Merge remote-tracking branch 'marshall/mom_cs_to_stack' into dev/esmg
kshedstrom Jun 20, 2021
236307d
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Jun 20, 2021
f912b2a
Merge branch 'dev/gfdl' into mom_cs_to_stack
Hallberg-NOAA Jun 21, 2021
95a770a
Matt's suggestion for not sponging at the grid edge.
kshedstrom Jun 22, 2021
d292333
Merge remote-tracking branch 'alexandra/dev/gfdl' into dev/esmg
kshedstrom Jun 22, 2021
53dfdc7
Finish the masking out of edge in uv sponge.
kshedstrom Jun 24, 2021
2fd8b4a
Merge remote-tracking branch 'alexandra/dev/gfdl' into dev/esmg
kshedstrom Jun 24, 2021
ec8e209
Merge branch 'dev/gfdl' into dev/esmg
Hallberg-NOAA Jun 24, 2021
5c0e8db
Merge remote-tracking branch 'origin' into SPEAR_ECDA
MJHarrison-GFDL Jun 28, 2021
d7dece9
+Add wind-stress acceleration diagnostics
Hallberg-NOAA Jul 2, 2021
d4305c3
Flag inconsistent parameters if ADIABATIC = True
Hallberg-NOAA Jul 2, 2021
692d871
Merge remote-tracking branch 'gfdl/dev-gfdl-main-candidate-2021-07-08…
kshedstrom Jul 8, 2021
afe75e8
+Add a restart registry lock & fix OBC call order
Hallberg-NOAA Jul 8, 2021
b9075a8
Bug fix for FMS2 issue #761, broadcast from root pe
nikizadehgfdl Jul 12, 2021
573b86b
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Jul 15, 2021
b7f2cea
Add location to ssh warning when dry.
kshedstrom Jul 19, 2021
5e64a59
add option to prescribe generation site in grid indices
Jun 28, 2021
daf9122
Merge remote-tracking branch 'gfdl/dev-gfdl-main-candidate-2021-07-08…
kshedstrom Jul 20, 2021
819999e
+Fixed rare issue with MOM_geothermal and cleanup
Hallberg-NOAA Jul 21, 2021
7a65026
Implement visc remnant versions of PFu, CAu, u_accel_bt, diffu
NoraLoose Jul 24, 2021
2601b47
Add d[uv]_dt_visc_rem diagnostics
NoraLoose Jul 24, 2021
20b8bfc
Attempt to implement KE budget modified by visc rem
NoraLoose Jul 25, 2021
2169f6d
Merge branch 'dev/gfdl' of github.com:NOAA-GFDL/MOM6 into SPEAR_ECDA
MJHarrison-GFDL Jul 26, 2021
eacf3e2
comments
MJHarrison-GFDL Jul 26, 2021
2cb2058
Merge branch 'dev/gfdl' into mom_cs_to_stack
Hallberg-NOAA Jul 26, 2021
9c0a735
add dimensional rescaling for thickness initialization
MJHarrison-GFDL Jul 26, 2021
016beb6
Merge branch 'NOAA-GFDL:dev/gfdl' into dev/gfdl
OlgaSergienko Jul 26, 2021
8ef9596
Merge https://github.com/OlgaSergienko/MOM6 into ice_dynamics
OlgaSergienko Jul 26, 2021
71b4103
Merge pull request #1429 from marshallward/mom_cs_to_stack
Hallberg-NOAA Jul 26, 2021
34593cb
Merge branch 'dev/gfdl' into dev/esmg
Hallberg-NOAA Jul 26, 2021
91dabba
(*)Solution to UV sponge restarts (#1434)
kshedstrom Jul 26, 2021
2137fce
Merge branch 'dev/gfdl' into stress_accel_diag
Hallberg-NOAA Jul 26, 2021
bf0b9cd
Merge branch 'Hallberg-NOAA-stress_accel_diag' into dev/gfdl
adcroft Jul 27, 2021
d76af84
Merge branch 'dev/gfdl' into adiabatic_checks
adcroft Jul 28, 2021
2995cff
Fix register_diag_field axes_grp pointer init
marshallward Jul 28, 2021
9267708
Merge pull request #1438 from Hallberg-NOAA/adiabatic_checks
adcroft Jul 28, 2021
321ced4
Merge branch 'dev/gfdl' into restart_lock
adcroft Jul 28, 2021
fec31b0
Merge branch 'dev/gfdl' into geothermal_cleanup
marshallward Jul 29, 2021
5fa87f2
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Jul 29, 2021
314ba78
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Jul 29, 2021
090fa83
Add optional argument to FMS2 interface to init_extern_field
MJHarrison-GFDL Jul 30, 2021
0abf9c2
Merge branch 'Hallberg-NOAA-restart_lock' into dev/gfdl
adcroft Jul 30, 2021
34b18df
Correct topography for masked-out land PEs halos
herrwang0 Jul 31, 2021
1ce6fe1
Rename local variable Dmin in initialize_masks()
herrwang0 Jul 31, 2021
1acc70e
Fix mask bug in apply_topography_edits_from_file
herrwang0 Jul 31, 2021
4208525
Fix syntax error
NoraLoose Jul 31, 2021
f4d4839
Fix some style errors
NoraLoose Jul 31, 2021
b1357bc
Fix more style errors
NoraLoose Jul 31, 2021
777bd35
Merge branch 'dev/gfdl' into geothermal_cleanup
marshallward Aug 1, 2021
0d2af76
fix refraction code
Aug 3, 2021
6701b85
Fix bug from commit 893a06e062 .
MJHarrison-GFDL Aug 3, 2021
2d19b25
Fix to codecov file path search
marshallward Aug 3, 2021
be09de0
Remove added KE budget diagnostics
NoraLoose Aug 4, 2021
fbdac20
Fix small bug
NoraLoose Aug 4, 2021
86741cd
Small style fix
NoraLoose Aug 4, 2021
49aa47d
Merge pull request #1450 from Hallberg-NOAA/geothermal_cleanup
marshallward Aug 4, 2021
a40a90f
Fix allocation problems
NoraLoose Aug 4, 2021
156d02c
Make use_drag_rate independent of MEKE_damping
gustavo-marques Aug 4, 2021
f31e5e6
Remove du_dt_visc_rem diagnostic
NoraLoose Aug 4, 2021
ca0fb89
Fix small inconsistency: CS%visc_rem_v --> CS%ADp%visc_rem_v
NoraLoose Aug 4, 2021
a874d6d
Don't need inout for ADp anymore
NoraLoose Aug 4, 2021
508fbf4
Merge branch 'dev/gfdl' into codecov_io_path_fix
adcroft Aug 5, 2021
20d91da
Merge branch 'dev/gfdl' into fix-topoinit_2
marshallward Aug 5, 2021
ffe1900
Merge pull request #1460 from marshallward/codecov_io_path_fix
adcroft Aug 5, 2021
a77817d
Merge branch 'dev/gfdl' into fix-topoinit_2
marshallward Aug 5, 2021
ee198de
Merge pull request #10 from NoraLoose/cpt_visc_rem_diags
gustavo-marques Aug 5, 2021
3a0725d
Merge pull request #1457 from herrwang0/fix-topoinit_2
marshallward Aug 5, 2021
40895ba
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Aug 5, 2021
bf34a57
Merge branch 'dev/gfdl' into sigma_shelf_zstar
marshallward Aug 5, 2021
13b01e5
Merge pull request #11 from gustavo-marques/meke_damping
gustavo-marques Aug 5, 2021
e28f74d
Merge branch 'dev/gfdl' into dev/cpt
gustavo-marques Aug 5, 2021
7b3dd02
Merge pull request #12 from gustavo-marques/merge_dev_gfdl_5Aug2021
gustavo-marques Aug 5, 2021
bc99ba2
Merge pull request #1459 from MJHarrison-GFDL/sigma_shelf_zstar
marshallward Aug 6, 2021
717076b
Merge branch 'dev/gfdl' into diag_d2_ptr_fix
Hallberg-NOAA Aug 6, 2021
2ef3a11
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Aug 6, 2021
580db49
Merge branch 'main' into dev/gfdl
marshallward Aug 7, 2021
5cdc20d
Merge branch 'dev/gfdl' into diag_d2_ptr_fix
marshallward Aug 7, 2021
7883f63
Merge pull request #1456 from marshallward/diag_d2_ptr_fix
marshallward Aug 7, 2021
83954c2
Merge branch 'dev/gfdl' into dev/cpt
gustavo-marques Aug 7, 2021
8edc472
logging/bulletproofing
raphaeldussin Aug 9, 2021
268f467
fix indexing and potential division by small number
raphaeldussin Aug 9, 2021
9b97495
replace denominator of dlnCn_dxy with a more solid schme
raphaeldussin Aug 9, 2021
ff89804
add complementary test
raphaeldussin Aug 9, 2021
aabd67e
Merge branch 'dev/gfdl' into fix_1149
Hallberg-NOAA Aug 9, 2021
c108379
Restrict printing warning message to root pe
nikizadehgfdl Aug 10, 2021
906f8af
Merge branch 'dev/gfdl' into bugfix_ifRootPe
nikizadehgfdl Aug 10, 2021
77175fe
Merge pull request #1448 from raphaeldussin/fix_1149
marshallward Aug 11, 2021
3223bba
Merge branch 'dev/gfdl' into bugfix_ifRootPe
Hallberg-NOAA Aug 11, 2021
66a7584
Fix pointer initialization and other cleanup
MJHarrison-GFDL Aug 11, 2021
5ba918a
Merge branch 'dev/gfdl' of github.com:NOAA-GFDL/MOM6 into SPEAR_ECDA
MJHarrison-GFDL Aug 11, 2021
e88cdaa
Merge pull request #1462 from nikizadehgfdl/bugfix_ifRootPe
marshallward Aug 11, 2021
76a6bbf
Merge branch 'dev/gfdl' into fix_refraction_tides
raphaeldussin Aug 11, 2021
6f1a191
+Add optional dZref argument to find_eta
Hallberg-NOAA Aug 15, 2021
a2df3b7
Code cleanup in MOM_regridding
Hallberg-NOAA Aug 15, 2021
db43b35
Longer error string in get_polynomial_coordinate
Hallberg-NOAA Aug 15, 2021
4d8d7af
+Add optional Z_0p argument to int_density_dz
Hallberg-NOAA Aug 15, 2021
e4ffa76
Corrects the routine indicated in 2 error messages
Hallberg-NOAA Aug 15, 2021
7cc0582
Prep initialization for reference height changes
Hallberg-NOAA Aug 15, 2021
62446ec
Cleanup of comments in MOM_ALE_sponge.F90
Hallberg-NOAA Aug 15, 2021
c72d441
(*)Fix dimensionally inconsistent MEKE beta calcs
Hallberg-NOAA Aug 15, 2021
5017bf6
Added comments highlighting bugs
Hallberg-NOAA Aug 15, 2021
f6ab01d
more elegant formulation for cn_u/cn_v
Aug 16, 2021
c703d22
better definition of cnmask
Aug 16, 2021
bcbf43c
cosmetics
Aug 16, 2021
3cda6fd
+Pass depth_tot to initialization routines
Hallberg-NOAA Aug 17, 2021
8a0ae94
+Pass depth_tot around within MOM_MEKE
Hallberg-NOAA Aug 17, 2021
a29bff9
Merge pull request #1458 from raphaeldussin/fix_refraction_tides
marshallward Aug 17, 2021
23d0076
Merge branch 'dev/gfdl' into Z_ref_prelude
Hallberg-NOAA Aug 17, 2021
3150c9f
Merge branch 'Z_ref_prelude' into Z_ref_prep2
Hallberg-NOAA Aug 17, 2021
00ea6c7
(*)Use summed thicknesses in OBC wave speed
Hallberg-NOAA Aug 18, 2021
03d0345
Testing: Replace bc with awk; framework support
marshallward Aug 18, 2021
6044c8b
Merge branch 'make_profile' into make_prof_merge
marshallward Aug 18, 2021
7e9fd3d
Tiny typo.
kshedstrom Aug 18, 2021
c20c771
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Aug 18, 2021
b41d75a
Merge remote-tracking branch 'hallberg/OBC_cg_depth_fix' into dev/esmg
kshedstrom Aug 18, 2021
dabf8ea
Documented internal tidal mixing.
kshedstrom Aug 19, 2021
6b6debf
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Aug 19, 2021
91b0f90
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Aug 19, 2021
c9c4cc9
Fixed the \cite arguments?
kshedstrom Aug 20, 2021
37465ec
Tiny typo.
kshedstrom Aug 18, 2021
1cd9ea5
Documented internal tidal mixing.
kshedstrom Aug 19, 2021
1e80385
Fixed the \cite arguments?
kshedstrom Aug 20, 2021
cf67c92
Merge pull request #1467 from Hallberg-NOAA/Z_ref_prelude
marshallward Aug 22, 2021
7766f3b
Merge pull request #1469 from Hallberg-NOAA/Z_ref_prep2
marshallward Aug 23, 2021
817217e
Merge pull request #1470 from Hallberg-NOAA/OBC_cg_depth_fix
marshallward Aug 23, 2021
8ee65a6
Fix units of *_visc_rem terms
gustavo-marques Aug 23, 2021
ac316f0
Merge remote-tracking branch 'gustavo/fix_units_visc_rem_terms' into …
gustavo-marques Aug 23, 2021
3ce2efe
changes to ice_velocity_mask_update, initialization of ice velocity a…
OlgaSergienko Aug 25, 2021
a5caf2e
removed tab from MOM_ice_shelf_initialize.F90
OlgaSergienko Aug 25, 2021
dc205c3
(*)Fix discretization issues with USE_GME=True
Hallberg-NOAA Aug 26, 2021
1256905
(*)Use depths in DOME and dye tracer initialization
Hallberg-NOAA Aug 26, 2021
90af3cb
Merge branch 'pr/1473' into dev/gfdl
marshallward Aug 26, 2021
8cd4330
(*+)New internal tide bathymetric parameters
Hallberg-NOAA Aug 27, 2021
6979c29
+(*)Add option for MEKE to calculate total depth
Hallberg-NOAA Aug 27, 2021
60ad2ed
Merge branch 'dev/gfdl' into SPEAR_ECDA
Hallberg-NOAA Aug 27, 2021
e24a58f
Merge branch 'dev/gfdl' into test_bc_framework_fixes
Hallberg-NOAA Aug 27, 2021
f347b10
Testing: Disable 2018 answer flags
marshallward Aug 27, 2021
c2b2fd1
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Aug 27, 2021
e0e70e3
Merge pull request #1471 from marshallward/test_bc_framework_fixes
Hallberg-NOAA Aug 27, 2021
e85f291
Merge branch 'dev/gfdl' into make_prof_merge
Hallberg-NOAA Aug 27, 2021
79fcdfb
Merge pull request #1472 from marshallward/make_prof_merge
Hallberg-NOAA Aug 27, 2021
72a525a
Go back to gfdl verison of MOM_boundary_update
kshedstrom Aug 28, 2021
710b087
More documentation - Jackson start.
kshedstrom Aug 28, 2021
7faf3fd
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Aug 28, 2021
ddec6f9
Testing: Rotation support for MOM_read_data
marshallward Aug 28, 2021
7ab8f12
Merge branch 'dev/gfdl' into hor_visc_GME_fix
marshallward Aug 29, 2021
5666854
Merge pull request #1481 from Hallberg-NOAA/hor_visc_GME_fix
marshallward Aug 30, 2021
72a084e
Merge branch 'dev/gfdl' into DOME_tracer_init_depth
marshallward Aug 30, 2021
13fdbf0
Merge pull request #1482 from Hallberg-NOAA/DOME_tracer_init_depth
marshallward Aug 30, 2021
2fbdf35
Merge branch 'dev/gfdl' into internal_tide_bathy_params
marshallward Aug 30, 2021
62909e6
Merge pull request #1483 from Hallberg-NOAA/internal_tide_bathy_params
marshallward Aug 30, 2021
d03a2b2
Merge branch 'dev/gfdl' into better_MEKE_total_depth
marshallward Aug 30, 2021
868c11a
Always initialize drag_rate
gustavo-marques Aug 30, 2021
21fffff
Merge pull request #1484 from Hallberg-NOAA/better_MEKE_total_depth
marshallward Aug 30, 2021
7cd584e
Merge branch 'dev/gfdl' into testing_no_2018
Hallberg-NOAA Aug 30, 2021
53443ae
Merge branch 'meke_damping' into cpt2gfdl_080622
gustavo-marques Aug 30, 2021
df97d4f
Merge pull request #1485 from marshallward/testing_no_2018
Hallberg-NOAA Aug 30, 2021
ba6f56d
Add code that was deleted unintentionally
gustavo-marques Aug 30, 2021
a253d37
init local arrays, fix to axes and logging
Aug 27, 2021
060c412
(*)Offset G%bathyT by -G%Z_ref
Hallberg-NOAA Aug 31, 2021
442ae8f
changed the block idetentation for consistency with MOM6 code style
OlgaSergienko Aug 31, 2021
e2c565c
changed identation MOM_ice_shelf_initialize.F90 to follow MOM6 conven…
OlgaSergienko Aug 31, 2021
91383e3
Testing: Set MALLOC_PERTURB_ to 1
marshallward Aug 31, 2021
7181090
Merge remote-tracking branch 'gustavo/dev-ncar-main-candidate-2021-08…
kshedstrom Aug 31, 2021
2925661
Merge branch 'dev/gfdl' into cpt2gfdl_080622
marshallward Aug 31, 2021
14aebaa
Merge branch 'dev/gfdl' into fix_diags_intwaves
raphaeldussin Aug 31, 2021
ebd0393
Merge pull request #1474 from gustavo-marques/cpt2gfdl_080622
marshallward Aug 31, 2021
7f76390
Some background diffusivity text
kshedstrom Sep 1, 2021
ccaddf1
Merge branch 'dev/gfdl' into SPEAR_ECDA
marshallward Sep 1, 2021
d37f1cf
Add documentation for correct_leap_year_inconsistency argument
MJHarrison-GFDL Sep 1, 2021
88da4c9
clearer documentation for correct_leap_year_inconsistency flag
MJHarrison-GFDL Sep 1, 2021
f46c4bc
Changed identation in MOM6_ice_shelf_initialize.F90 to follow MOM6 co…
OlgaSergienko Sep 1, 2021
f98b76d
Merge pull request #1453 from MJHarrison-GFDL/SPEAR_ECDA
marshallward Sep 1, 2021
d234258
Merge branch 'dev/gfdl' into ice_dynamics
marshallward Sep 1, 2021
a7d8e3a
Merge pull request #1479 from OlgaSergienko/ice_dynamics
marshallward Sep 1, 2021
5bea586
Merge branch 'dev/gfdl' into fix_diags_intwaves
marshallward Sep 1, 2021
5718664
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Sep 1, 2021
7549fe3
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Sep 1, 2021
e3949a6
Merge branch 'dev/esmg' of github.com:ESMG/MOM6 into dev/esmg
kshedstrom Sep 1, 2021
ca1c426
(*)Avoid uninitialized data use in find_interfaces
Hallberg-NOAA Sep 1, 2021
b039e62
More documentation - Jackson start.
kshedstrom Aug 28, 2021
4f707ce
Some background diffusivity text
kshedstrom Sep 1, 2021
d1c0835
Merge pull request #1487 from raphaeldussin/fix_diags_intwaves
marshallward Sep 1, 2021
9ee0771
More on background mixing.
kshedstrom Sep 2, 2021
db3fd1c
Fixed forgotten \f$
kshedstrom Sep 2, 2021
9c2b4e4
Fixing a citation
kshedstrom Sep 2, 2021
6d13b18
Still more syntax issues
kshedstrom Sep 2, 2021
456d4a9
ALE sponge mask_z halo fixes
marshallward Sep 2, 2021
67707e4
Merge branch 'dev/gfdl' into ale_sponge_halo_fix
marshallward Sep 2, 2021
127a221
Merge branch 'dev/gfdl' into rotate_read_data
Hallberg-NOAA Sep 2, 2021
41c96cc
Merge branch 'dev/gfdl' into find_interfaces_fix
marshallward Sep 3, 2021
54b4a23
Merge pull request #1493 from Hallberg-NOAA/find_interfaces_fix
marshallward Sep 3, 2021
b560b2c
Merge branch 'pr/1494' into dev/gfdl
marshallward Sep 3, 2021
b47b446
ALE sponge: Only update fields on uv over masks
marshallward Sep 4, 2021
6a7216b
Merge branch 'dev/gfdl' into rotate_read_data
Hallberg-NOAA Sep 7, 2021
e5a522b
Infra: MOM_read_data rename to read_field
marshallward Sep 8, 2021
a316416
Merge pull request #1488 from marshallward/rotate_read_data
Hallberg-NOAA Sep 9, 2021
f44b9c4
Merge branch 'dev/gfdl' into offset_bathyT_by_Z_ref
Hallberg-NOAA Sep 9, 2021
1623085
Merge pull request #1490 from Hallberg-NOAA/offset_bathyT_by_Z_ref
marshallward Sep 11, 2021
e05ceb2
Merge branch 'dev/gfdl' into ale_sponge_halo_fix
Hallberg-NOAA Sep 13, 2021
87aad26
Merge pull request #1495 from marshallward/ale_sponge_halo_fix
Hallberg-NOAA Sep 13, 2021
4749308
Merge branch 'dev/gfdl' into malloc_perturb_update
Hallberg-NOAA Sep 13, 2021
cabe0d1
Merge pull request #1492 from marshallward/malloc_perturb_update
Hallberg-NOAA Sep 13, 2021
72aabe5
Merge branch 'dev/gfdl' into main_to_dev_gfdl
marshallward Sep 14, 2021
457792a
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Sep 14, 2021
233f982
Merge pull request #1497 from marshallward/main_to_dev_gfdl
Hallberg-NOAA Sep 15, 2021
73ed0dc
Merge remote-tracking branch 'gfdl/dev/gfdl' into dev/esmg
kshedstrom Sep 15, 2021
3df34af
Fix initialize_ice_thickness_from_file for ISOMIP
Hallberg-NOAA Sep 16, 2021
d9af347
Use allocate with source to initialize arrays
Hallberg-NOAA Sep 17, 2021
95cecb6
Done with internal diffusion?
kshedstrom Sep 17, 2021
b723674
Adding information to MOM6 warning.
kshedstrom Sep 20, 2021
e368bfe
Several small things, including fix to sponge verbosity.
kshedstrom Sep 22, 2021
a3a4d8e
Changing verbosity in MOM_horizontal_regridding.F90
kshedstrom Sep 22, 2021
4bf730a
+(*)Add ALTERNATE_FIRST_DIRECTION
Hallberg-NOAA Sep 23, 2021
c937208
Merge pull request #1498 from Hallberg-NOAA/repair_ISOMIP
marshallward Sep 24, 2021
55876e8
Merge branch 'dev/gfdl' into allocate_with_source
marshallward Sep 24, 2021
2336727
Merge pull request #1499 from Hallberg-NOAA/allocate_with_source
marshallward Sep 24, 2021
3f2ebd0
Merge branch 'dev/gfdl' into dev/esmg
Hallberg-NOAA Sep 24, 2021
41947ab
Merge pull request #1500 from ESMG/dev/esmg
Hallberg-NOAA Sep 24, 2021
f57f608
Merge branch 'dev/gfdl' into alternate_first_direction
Hallberg-NOAA Sep 24, 2021
16128ef
refactoring reflection
Jul 20, 2021
d438581
Testing: Configurable list of test targets
marshallward Sep 28, 2021
482c0e5
Testing: Individual tc tests; no wildcards
marshallward Sep 28, 2021
6e6adb0
Testing: Generalized dimension testing
marshallward Sep 28, 2021
8e4b4bc
Merge pull request #1501 from Hallberg-NOAA/alternate_first_direction
marshallward Oct 1, 2021
ff3e265
Merge branch 'dev/gfdl' into test_rules_v2
Hallberg-NOAA Oct 1, 2021
bb9cb35
Merge pull request #1502 from marshallward/test_rules_v2
adcroft Oct 1, 2021
08ca2bb
fix units in variable declaration
raphaeldussin Oct 1, 2021
7fc7130
(*) N2_floor init fix when FGNV streamfn disabled
marshallward Oct 1, 2021
650fe9a
Merge branch 'dev/gfdl' into refactor_int_tide_reflection
marshallward Oct 1, 2021
503df0e
Merge pull request #1468 from raphaeldussin/refactor_int_tide_reflection
marshallward Oct 2, 2021
456de80
Merge branch 'dev/gfdl' into use_fgnv_flag_fix
marshallward Oct 2, 2021
4d3d10e
Merge pull request #1505 from marshallward/use_fgnv_flag_fix
marshallward Oct 2, 2021
4012505
correct long_name for tracer_dfy for passive tracers when diag_form == 1
klindsay28 Oct 10, 2021
de7a771
Merge pull request #1513 from klindsay28/dev-gfdl-main-candidate-2021…
marshallward Oct 10, 2021
09a1cb9
Recover topography clipping when not specifying MINIMUM_DEPTH
adcroft Oct 12, 2021
554c8a0
Correct logical associated with NW2 tracers
adcroft Oct 12, 2021
1aa5b50
Remove alternate topo-clipping for unexpected parameter combination
adcroft Oct 12, 2021
b3d0088
Merge pull request #1517 from adcroft/clip-topo-patch
Hallberg-NOAA Oct 12, 2021
ecf88c6
Merge pull request #1518 from adcroft/patch-nw2-tracer-init
marshallward Oct 13, 2021
8d80d64
Merge pull request #1507 from NOAA-GFDL/dev-gfdl-main-candidate-2021-…
marshallward Oct 20, 2021
fd02017
Merge remote-tracking branch 'GFDL/main' into feature/update-to-GFDL-…
jiandewang Oct 20, 2021
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1 change: 1 addition & 0 deletions .github/actions/testing-setup/action.yml
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@ runs:
echo "::group::Install linux packages"
sudo apt-get update
sudo apt-get install netcdf-bin libnetcdf-dev libnetcdff-dev mpich libmpich-dev
sudo apt-get install linux-tools-common
echo "::endgroup::"

- name: Compile FMS library
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/expression.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,4 +24,4 @@ jobs:
run: make run.symmetric -k -s

- name: Run tests
run: make test.repros test.dims -k -s
run: make test.repro test.dim -k -s
2 changes: 1 addition & 1 deletion .github/workflows/other.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,4 +24,4 @@ jobs:
run: make run.symmetric -k -s

- name: Run tests
run: make test.openmps test.nans test.restarts -k -s
run: make test.openmp test.nan test.restart -k -s
36 changes: 36 additions & 0 deletions .github/workflows/perfmon.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,36 @@
name: Performance Monitor

on: [pull_request]

jobs:
build-test-perfmon:

runs-on: ubuntu-latest
defaults:
run:
working-directory: .testing

steps:
- uses: actions/checkout@v2
with:
submodules: recursive

- uses: ./.github/actions/testing-setup

- name: Compile optimized models
run: >-
make -j build.prof
MOM_TARGET_SLUG=$GITHUB_REPOSITORY
MOM_TARGET_LOCAL_BRANCH=$GITHUB_BASE_REF
DO_REGRESSION_TESTS=true

- name: Generate profile data
run: >-
pip install f90nml &&
make profile
DO_REGRESSION_TESTS=true

- name: Generate perf data
run: |
sudo sysctl -w kernel.perf_event_paranoid=2
make perf DO_REGRESSION_TESTS=true
2 changes: 1 addition & 1 deletion .github/workflows/regression.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,4 +24,4 @@ jobs:
run: make run.symmetric -k -s

- name: Regression test
run: make test.regressions DO_REGRESSION_TESTS=true -k -s
run: make test.regression DO_REGRESSION_TESTS=true -k -s
2 changes: 1 addition & 1 deletion .github/workflows/stencil.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,4 +24,4 @@ jobs:
run: make run.symmetric -k -s

- name: Run tests
run: make test.grids test.layouts test.rotations -k -s
run: make test.grid test.layout test.rotate -k -s
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