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Separate input values files #41

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antgonza opened this issue Aug 5, 2015 · 2 comments
Open

Separate input values files #41

antgonza opened this issue Aug 5, 2015 · 2 comments

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@antgonza
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antgonza commented Aug 5, 2015

Currently, in the same file you need to have the 3D value point and the values to plot in the model. I think a better way to go about this is to have:

  • The model (stl)
  • The sample names and position in 3D (csv) -- we could even perhaps merge this and the previous one
  • Multiple input formats where you have different information (rows vs features).

I believe this will be more convenient because the first 2 only are needed once but the 3rd kind can hold different kinds of values and could constantly change: family or species level taxonomic information, metobolomics, PCoA axes, etc.

@theodev
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theodev commented Aug 5, 2015

actually this is what we had at the beginning. we converted to using just 1 CSV file, because it improved usability

anyway thanks for the idea, we will discuss it internally

@antgonza
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antgonza commented Aug 6, 2015

Ahh OK, then perhaps use 3 files. The issue of having the points together with the values to display is that if you have different datasets (for example: 16S and metabolomics) you will need to add the points to both files or merge those files into 1 which could become painful for the users. Having them separate will mean that you can simply load each one independently.

@iprotsyuk iprotsyuk reopened this Sep 29, 2015
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