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simgenldpd.R
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simgenldpd.R
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source("solve01genldpd.R")
source("genrndprob.R")
library(xlsx)
simgenldpd=function(beta){
cntmean=6
cntsigma=1
prob=0.8
sample=read.xlsx("testing/sample.xlsx",sheetName = "Sheet1")
est0genldpd=list()
est0.2genldpd=list()
est0.4genldpd=list()
est0.6genldpd=list()
est0.8genldpd=list()
est1genldpd=list()
i=2
while(i<=1001){
print(i)
smp=sample[,i]
cat("\n",smp,file="testing/mutst100gldpd4.txt",sep=",",append=TRUE)
cat("\n",file="testing/mutst100gldpd4.txt",append=TRUE)
estgenldpd=solve01genldpd(smp,beta)
est0genldpd[[i]]=estgenldpd[[1]]
est0.2genldpd[[i]]=estgenldpd[[2]]
est0.4genldpd[[i]]=estgenldpd[[3]]
est0.6genldpd[[i]]=estgenldpd[[4]]
est0.8genldpd[[i]]=estgenldpd[[5]]
est1genldpd[[i]]=estgenldpd[[6]]
if(est0genldpd[[i]]=="Start with new solution" || abs(est0genldpd[[i]][1])>4
|| abs(est0genldpd[[i]][2])>5){est0genldpd[[i]]=c(NA,NA)}
if(est0.2genldpd[[i]]=="Start with new solution" || abs(est0.2genldpd[[i]][1])>4
|| abs(est0.2genldpd[[i]][2])>5){est0.2genldpd[[i]]=c(NA,NA)}
if(est0.4genldpd[[i]]=="Start with new solution" || abs(est0.4genldpd[[i]][1])>4
|| abs(est0.4genldpd[[i]][2])>5){est0.4genldpd[[i]]=c(NA,NA)}
if(est0.6genldpd[[i]]=="Start with new solution" || abs(est0.6genldpd[[i]][1])>4
|| abs(est0.6genldpd[[i]][2])>5){est0.6genldpd[[i]]=c(NA,NA)}
if(est0.8genldpd[[i]]=="Start with new solution" || abs(est0.8genldpd[[i]][1])>4
|| abs(est0.8genldpd[[i]][2])>5){est0.8genldpd[[i]]=c(NA,NA)}
if(est1genldpd[[i]]=="Start with new solution" || abs(est1genldpd[[i]][1])>4
|| abs(est1genldpd[[i]][2])>5){est1genldpd[[i]]=c(NA,NA)}
cat(i,est0genldpd[[i]][1],est0.2genldpd[[i]][1],est0.4genldpd[[i]][1]
,est0.6genldpd[[i]][1],est0.8genldpd[[i]][1],est1genldpd[[i]][1],
file="testing/mutst100gldpd4.txt",sep="\t",append=TRUE)
cat("\n",file="testing/mutst100gldpd4.txt",append=TRUE)
i=i+1
}
mu0genldpd=sapply(est0genldpd,function(x) x[1])
mu0.2genldpd=sapply(est0.2genldpd,function(x) x[1])
mu0.4genldpd=sapply(est0.4genldpd,function(x) x[1])
mu0.6genldpd=sapply(est0.6genldpd,function(x) x[1])
mu0.8genldpd=sapply(est0.8genldpd,function(x) x[1])
mu1genldpd=sapply(est1genldpd,function(x) x[1])
sigma0genldpd=sapply(est0genldpd,function(x) x[2])
sigma0.2genldpd=sapply(est0.2genldpd,function(x) x[2])
sigma0.4genldpd=sapply(est0.4genldpd,function(x) x[2])
sigma0.6genldpd=sapply(est0.6genldpd,function(x) x[2])
sigma0.8genldpd=sapply(est0.8genldpd,function(x) x[2])
sigma1genldpd=sapply(est1genldpd,function(x) x[2])
mu0genldpd=unlist(mu0genldpd)
mu0.2genldpd=unlist(mu0.2genldpd)
mu0.4genldpd=unlist(mu0.4genldpd)
mu0.6genldpd=unlist(mu0.6genldpd)
mu0.8genldpd=unlist(mu0.8genldpd)
mu1genldpd=unlist(mu1genldpd)
sigma0genldpd=unlist(sigma0genldpd)
sigma0.2genldpd=unlist(sigma0.2genldpd)
sigma0.4genldpd=unlist(sigma0.4genldpd)
sigma0.6genldpd=unlist(sigma0.6genldpd)
sigma0.8genldpd=unlist(sigma0.8genldpd)
sigma1genldpd=unlist(sigma1genldpd)
mugenldpd=data.frame(mu0genldpd,mu0.2genldpd,mu0.4genldpd,mu0.6genldpd,mu0.8genldpd,
mu1genldpd)
sigmagenldpd=data.frame(sigma0genldpd,sigma0.2genldpd,sigma0.4genldpd,
sigma0.6genldpd,sigma0.8genldpd,sigma1genldpd)
write.xlsx(mugenldpd,file="testing/npure100genldpdmu.xlsx",sheetName="Sheetgldp4",append=T)
write.xlsx(sigmagenldpd,file="testing/npure100genldpdsigma.xlsx",sheetName="Sheetgldp4",append=T)
avgbiasmugenldpd=c()
avgmsemugenldpd=c()
avgbiassiggenldpd=c()
avgmsesiggenldpd=c()
avgbiasmugenldpd[1]=mean((mu0genldpd-rep(0,500)),na.rm=T)
avgbiasmugenldpd[2]=mean((mu0.2genldpd-rep(0,500)),na.rm=T)
avgbiasmugenldpd[3]=mean((mu0.4genldpd-rep(0,500)),na.rm=T)
avgbiasmugenldpd[4]=mean((mu0.6genldpd-rep(0,500)),na.rm=T)
avgbiasmugenldpd[5]=mean((mu0.8genldpd-rep(0,500)),na.rm=T)
avgbiasmugenldpd[6]=mean((mu1genldpd-rep(0,500)),na.rm=T)
avgmsemugenldpd[1]=mean((mu0genldpd-rep(0,500))^2,na.rm=T)
avgmsemugenldpd[2]=mean((mu0.2genldpd-rep(0,500))^2,na.rm=T)
avgmsemugenldpd[3]=mean((mu0.4genldpd-rep(0,500))^2,na.rm=T)
avgmsemugenldpd[4]=mean((mu0.6genldpd-rep(0,500))^2,na.rm=T)
avgmsemugenldpd[5]=mean((mu0.8genldpd-rep(0,500))^2,na.rm=T)
avgmsemugenldpd[6]=mean((mu1genldpd-rep(0,500))^2,na.rm=T)
avgbiassiggenldpd[1]=mean((sigma0genldpd-rep(1,500)),na.rm=T)
avgbiassiggenldpd[2]=mean((sigma0.2genldpd-rep(1,500)),na.rm=T)
avgbiassiggenldpd[3]=mean((sigma0.4genldpd-rep(1,500)),na.rm=T)
avgbiassiggenldpd[4]=mean((sigma0.6genldpd-rep(1,500)),na.rm=T)
avgbiassiggenldpd[5]=mean((sigma0.8genldpd-rep(1,500)),na.rm=T)
avgbiassiggenldpd[6]=mean((sigma1genldpd-rep(1,500)),na.rm=T)
avgmsesiggenldpd[1]=mean((sigma0genldpd-rep(1,500))^2,na.rm=T)
avgmsesiggenldpd[2]=mean((sigma0.2genldpd-rep(1,500))^2,na.rm=T)
avgmsesiggenldpd[3]=mean((sigma0.4genldpd-rep(1,500))^2,na.rm=T)
avgmsesiggenldpd[4]=mean((sigma0.6genldpd-rep(1,500))^2,na.rm=T)
avgmsesiggenldpd[5]=mean((sigma0.8genldpd-rep(1,500))^2,na.rm=T)
avgmsesiggenldpd[6]=mean((sigma1genldpd-rep(1,500))^2,na.rm=T)
avgbiasmugenldpd=round(avgbiasmugenldpd,5)
avgbiassiggenldpd=round(avgbiassiggenldpd,5)
avgmsemugenldpd=round(avgmsemugenldpd,5)
avgmsesiggenldpd=round(avgmsesiggenldpd,5)
alp=c("0.0","0.2","0.4","0.6","0.8","1.0")
#cat("\n\nAverage Bias and MSE for genldpd(n=100) pure mu",file="testing/biasmsemupuregldpd100.txt",sep="\n",append=T)
#cat("\nbeta Alpha0.0 Alpha0.2 Alpha0.4 Alpha0.6 Alpha0.8 Alpha1.0",file="testing/biasmsemupuregldpd100.txt",append=TRUE)
cat("\n",beta," Average Bias ",avgbiasmugenldpd[1],
" ",avgbiasmugenldpd[2]," ",avgbiasmugenldpd[3],
" ",avgbiasmugenldpd[4]," ",avgbiasmugenldpd[5],
" ",avgbiasmugenldpd[6],file="testing/biasmsemupuregldpd100.txt",append=TRUE)
cat("\n",beta," Average MSE ",avgmsemugenldpd[1],
" ",avgmsemugenldpd[2]," ",avgmsemugenldpd[3],
" ",avgmsemugenldpd[4]," ",avgmsemugenldpd[5],
" ",avgmsemugenldpd[6]," ",file="testing/biasmsemupuregldpd100.txt",append=TRUE)
#cat("\n\nAverage Bias and MSE for genldpd(n=100) pure sig",file="testing/biasmsesigpuregldpd100.txt",sep="\n",append=T)
#cat("\nbeta Alpha0.0 Alpha0.2 Alpha0.4 Alpha0.6 Alpha0.8 Alpha1.0",file="testing/biasmsesigpuregldpd100.txt",append=TRUE)
cat("\n",beta," Average Bias ",avgbiassiggenldpd[1],
" ",avgbiassiggenldpd[2]," ",avgbiassiggenldpd[3],
" ",avgbiassiggenldpd[4]," ",avgbiassiggenldpd[5],
" ",avgbiassiggenldpd[6]," ",file="testing/biasmsesigpuregldpd100.txt",append=TRUE)
cat("\n",beta," Average MSE ",avgmsesiggenldpd[1],
" ",avgmsesiggenldpd[2]," ",avgmsesiggenldpd[3],
" ",avgmsesiggenldpd[4]," ",avgmsesiggenldpd[5],
" ",avgmsesiggenldpd[6]," ",file="testing/biasmsesigpuregldpd100.txt",append=TRUE)
}