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@def title = "JuliaHealth - Meeting Notes"
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These are the public notes for the JuliaHealth Community.
Notes are published publicly here and are available for comments and review on the [public HackMD](https://hackmd.io/@AQm1lp9PSPyir6IoTPAZeQ/SJNu_d3uh).
Additionally, the notes are [hosted publicly on the GitHub](https://github.com/JuliaHealth/juliahealth.github.io/blob/dev/meeting-notes.md) and are open for PRs or edits as needed.

# August 25 2023

**In Attendance:**
**In Attendance:** Edmund Miller, Jonathan Starr, Clark Evans, Kirill Simonov, Jacob Zelko

**Location:** Virtual (JuliaHealth Google Meet)

**Summary:**
**Summary:** Recap of events from the JuliaHealth BoF at JuliaCon and introduction to the NumFOCUS OSSci project

**Keywords:**
**Keywords:** #numfocus #ossci #juliacon #bof #interoperability #databases #documentation

## Agenda

1. New member introductions
1. New member introductions

2. Misc Announcements

1. CalciumScoring.jl -- Dale Black

2. Survival Analyses -- Arin Basu

3. Google Summer of Code Fellowship wrapping up

4. We are on the Julia Community Calendar!

5. Small updates to the JuliaHealth website

2. Running tasks follow-ups:

a. Short-term task follow-ups:
1. Short-term task follow-ups:

i. @Jacob Set-up HackMD to take notes going forward
- @Jacob Set-up HackMD to take notes going forward

- Copy and paste meeting minutes over to JuliaHealth PR to update at end of meetings
- Copy and paste meeting minutes over to JuliaHealth PR to update at end of meetings

ii. @Dilum finds out how to live stream JuliaHealth BoF
2. @Dilum finds out how to live stream JuliaHealth BoF

b. Long-term task follow-ups:
- Long-term task follow-ups:

i. Creating a template repository 
3. Creating a template repository 

3. Debrief from JuliaCon

a. Interoperability of Julia with health research ecosystems (R)
1. Interoperability of Julia with health research ecosystems (R )

b. Develop and document tutorials showcasing compositional solutions to JuliaHealth ecosystem problems
2. Develop and document tutorials showcasing compositional solutions to JuliaHealth ecosystem problems

c. Coordinate with bigger Julia Blog to bridge between communities even better
3. Coordinate with bigger Julia Blog to bridge between communities even better

d. Databases and JuliaHealth
4. Databases and JuliaHealth

4. Open discussion on next steps for the JuliaHealth community
4. Jon Starr and NumFOCUS's OSSci Program

5. Open discussion on next steps for the JuliaHealth community

## Meeting Outcomes

### Short-Term Outcomes


- @Jacob follow-up with Jonathan about JuliaHealth + OSSci
- @Edmund let Jacob know about blog posts solving problems

### Long-Term Outcomes


- Support OSSci about JuliaHealth

## Notes

- Introductions
- Clark C. Evans
- Master cobbler of YAML
- Used to work at Prometheus Research
- Sold to IQVIA
- Worked under MechanicalRabbit Umbrella
- Developed FunSQL.jl with Kirill
- Database characterization
- Joined Tufts University CTSA
- Helping with data warehousing
- Objects to query OHDSI databases and EPIC Clarity
- Getting Pluto working
- Jonathan
- Manager for OSSci for NumFOCUS
- Goal: Mapping open source science ecosystem
- Work with Distributed Computing
- Berkeley technology
- Blocks and chains!
- Using Open Source and Science to drive research
- Edmund
- PhD Candidate at Texas Dallas
- Molecular and Cell Biology
- Functional Genomics
- Coming from JuliaCon
- Excited about Health stuff

- Interoperability of Julia with health research ecosystems (R )
- Easiest way to interoperate is to call them directly from the command line
- Build your own executables
- Most reliable/easiest
- Database approach:
- Build table in one language
- Ingest in another
- Combining executables in one location -- use Docker?
- Can run on several different machines
- Building R packages with Julia backends is possible


- Develop and document tutorials showcasing compositional solutions to JuliaHealth ecosystem problems
- Competing Julia with other tutorials?
- Switching over to Julia from what?
- Why are people still not switching?
- Demonstrating the use is one way
- Obviously, one could write more posts
- But there seems to be a lot of content already -- what is missing?
- Does seem like there is two different levels of documentation
- Beginner
- Advanced
- Where are the practical means of solving problems in Julia?

- Databases and JuliaHealth
- Show how to do the basics
- Common database errors
- How to address them
- Unclear on how to solve it; more people working in this space?
- Not really a problem within ecosystem
- Look at drivers across all packages to see how things work in Julia ecosystem
- See how we can address issues across ecosystem

- Jonathan Starr and NumFOCUS's OSSci Program
- Getting to deep diving within Julia ecosystem
- Researchers who want to find a package that they can use and develop
- Mapping projects and people to a given tool
- Can look at map to see where packages are needed for a particular ecosystem
- Can click on and connect with researchers
- Highlighting of credit for researchers
- Starting with NumFOCUS projects
- Building out knowledge of all ongoing projects/software
- Julia is little represented right now
- How to show to funders/orgs what projects to support
- How to build support across or collaboration between groups
- Trying to stop abandonware from happening
- Attempting to build social infrastructure
- Q&A
- Tufts doing something very similar -- happy to collaborate
- How can JuliaHealth get started and involved?
- Jonathan: Send me reference page and we can get this started!
- Links:
- About: https://numfocus.org/open-source-science-initiative-ossci
- How To Join: https://opensource.science
- Map of Open Source Science (MOSS)


# July 28 2023
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