Cleanup (#205)

* Add module.

* Add stuff.

* Fix mytree links

* Tests fixed

* Refactor tests

* Reformat

* Add poetry setup

* Drop more files

* Drop gitattributes and move contributing

* Create static

* Update citation

* Readd pyspelling

* Update workflows

* Upload to codecov

* Add dependabot

* Add labels.yml

* Add release drafter

* Update mds

* Drop circleci

* Simplify directories

* Add doc deps

* Add PR welcome

* Drop tilde req

* Add TFP dep

* Drop distrax refs

* Drop JaxUtils refs

* Run docs workflow

* Implement sample method

* Fix graph kernel sampler

* Add version

* Dynamic versioning

* Fix jit

* Add poetry build

* Add poetry build

---------

Co-authored-by: Daniel Dodd <daniel_dodd@icloud.com>

.github/codecov.yml

@@ -0,0 +1,18 @@
+# codecov used to be able to find this anywhere, now we have to manually
+# tell it where to look
+comment: false
+
+codecov:
+  notify:
+    require_ci_to_pass: no
+
+coverage:
+  status:
+    patch:
+      default:
+        target: 50%
+        if_no_uploads: error
+        if_not_found: success
+        if_ci_failed: failure
+    project:
+      default: false

.github/dependabot.yml

@@ -0,0 +1,21 @@
+version: 2
+updates:
+  - package-ecosystem: github-actions
+    directory: "/"
+    schedule:
+      interval: weekly
+  - package-ecosystem: pip
+    directory: "/.github/workflows"
+    schedule:
+      interval: weekly
+  - package-ecosystem: pip
+    directory: "/docs"
+    schedule:
+      interval: weekly
+  - package-ecosystem: pip
+    directory: "/"
+    schedule:
+      interval: weekly
+    versioning-strategy: lockfile-only
+    allow:
+      - dependency-type: "all"

.github/labels.yml

@@ -0,0 +1,66 @@
+---
+# Labels names are important as they are used by Release Drafter to decide
+# regarding where to record them in changelog or if to skip them.
+#
+# The repository labels will be automatically configured using this file and
+# the GitHub Action https://github.com/marketplace/actions/github-labeler.
+- name: breaking
+  description: Breaking Changes
+  color: bfd4f2
+- name: bug
+  description: Something isn't working
+  color: d73a4a
+- name: build
+  description: Build System and Dependencies
+  color: bfdadc
+- name: ci
+  description: Continuous Integration
+  color: 4a97d6
+- name: dependencies
+  description: Pull requests that update a dependency file
+  color: 0366d6
+- name: documentation
+  description: Improvements or additions to documentation
+  color: 0075ca
+- name: duplicate
+  description: This issue or pull request already exists
+  color: cfd3d7
+- name: enhancement
+  description: New feature or request
+  color: a2eeef
+- name: github_actions
+  description: Pull requests that update Github_actions code
+  color: "000000"
+- name: good first issue
+  description: Good for newcomers
+  color: 7057ff
+- name: help wanted
+  description: Extra attention is needed
+  color: 008672
+- name: invalid
+  description: This doesn't seem right
+  color: e4e669
+- name: performance
+  description: Performance
+  color: "016175"
+- name: python
+  description: Pull requests that update Python code
+  color: 2b67c6
+- name: question
+  description: Further information is requested
+  color: d876e3
+- name: refactoring
+  description: Refactoring
+  color: ef67c4
+- name: removal
+  description: Removals and Deprecations
+  color: 9ae7ea
+- name: style
+  description: Style
+  color: c120e5
+- name: testing
+  description: Testing
+  color: b1fc6f
+- name: wontfix
+  description: This will not be worked on
+  color: ffffff

.github/pull_request_template.md

@@ -1,33 +1,20 @@
-<!--- Please provide a general summary of your changes in the title above -->
+## Type of changes
 
-## Pull request type
+- [ ] Bug fix
+- [ ] New feature
+- [ ] Documentation / docstrings
+- [ ] Tests
+- [ ] Other
 
-<!-- Please try to limit your pull request to one type, submit multiple pull requests if needed. -->
+## Checklist
 
-Please check the type of change your PR introduces:
+- [ ] I've formatted the new code by running `poetry run pre-commit run --all-files --show-diff-on-failure` before committing.
+- [ ] I've added tests for new code.
+- [ ] I've added docstrings for the new code.
 
-- [ ] Bugfix
-- [ ] Feature
-- [ ] Code style update (formatting, renaming)
-- [ ] Refactoring (no functional changes, no api changes)
-- [ ] Build related changes
-- [ ] Documentation content changes
-- [ ] Other (please describe):
+## Description
 
-## What is the current behavior?
-
-<!-- Please describe the current behavior that you are modifying, or link to a relevant issue. -->
+Please describe your changes here. If this fixes a bug, please link to the issue, if possible.
 
 Issue Number: N/A
 
-## What is the new behavior?
-
-<!-- Please describe the behavior or changes that are being added by this PR. -->
-
--
--
--
-
-## Other information
-
-<!-- Any other information that is important to this PR such as screenshots of how the component looks before and after the change. -->

.github/release-drafter.yml

@@ -0,0 +1,28 @@
+categories:
+  - title: ":boom: Breaking Changes"
+    label: "breaking"
+  - title: ":rocket: Features"
+    label: "enhancement"
+  - title: ":fire: Removals and Deprecations"
+    label: "removal"
+  - title: ":beetle: Fixes"
+    label: "bug"
+  - title: ":racehorse: Performance"
+    label: "performance"
+  - title: ":rotating_light: Testing"
+    label: "testing"
+  - title: ":construction_worker: Continuous Integration"
+    label: "ci"
+  - title: ":books: Documentation"
+    label: "documentation"
+  - title: ":hammer: Refactoring"
+    label: "refactoring"
+  - title: ":lipstick: Style"
+    label: "style"
+  - title: ":package: Dependencies"
+    labels:
+      - "dependencies"
+      - "build"
+template: |
+  ## Changes
+  $CHANGES