Merge pull request #461 from INCATools/pip-issues

Update pip install pipline
INCATools · Sep 9, 2021 · 0394e5d · 0394e5d
2 parents 85b58d5 + 73b764c
commit 0394e5d
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diff --git a/Dockerfile b/Dockerfile
@@ -41,9 +41,12 @@ RUN apt-get update &&\
     libfreetype6-dev \
     libpng-dev \
     pkg-config \
-    xlsx2csv \
-    && python3 -m pip install --upgrade pip setuptools \
-    && python3 -m pip install -r /tools/requirements.txt \
+    xlsx2csv 
+
+#https://github.com/pypa/pip/issues/9187#issuecomment-853091201
+RUN  python3 -m pip install --upgrade pip==20.3.4  \
+    && python3 -m pip install --upgrade setuptools==52.0.0  \
+    && python3 -m pip install --use-feature=fast-deps --use-deprecated=legacy-resolver -r /tools/requirements.txt \
     && if [ ! -e /usr/bin/pip ]; then ln -sf /usr/bin/pip3 /usr/bin/pip ; fi \
     && if [ ! -e /usr/bin/python ]; then ln -sf /usr/bin/python3 /usr/bin/python; fi \
     && rm -r /root/.cache

diff --git a/requirements.txt b/requirements.txt
@@ -20,9 +20,9 @@ ruamel.yaml >=0.0
 seaborn>=0.0
 upsetplot>=0.0
 plotly>=0.0
-networkx==2.5
+networkx==2.3
+sssom>=0.3.2
 ontodev-cogs>=0.0
-sssom==0.14.11.dev0
 mkdocs >= 0.0
 funowl >= 0.0
 kgx >= 0.0