covariate_adjustment.bib

%%% OUR REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{VanLancker2022,
  doi = {10.48550/ARXIV.2201.12921},
  url = {https://arxiv.org/abs/2201.12921},
  author = {Van Lancker,  Kelly and Betz,  Joshua and Rosenblum,  Michael},
  keywords = {Methodology (stat.ME),  FOS: Computer and information sciences,  FOS: Computer and information sciences},
  title = {Combining Covariate Adjustment with Group Sequential,  Information Adaptive Designs to Improve Randomized Trial Efficiency},
  journal={arXiv preprint arXiv:1409.0473},
  publisher = {arXiv},
  year = {2022},
  copyright = {Creative Commons Attribution 4.0 International}
}




%%% R PACKAGE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@Manual{margins_package,
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@Manual{boot_package,
    title = {boot: Bootstrap R (S-Plus) Functions},
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    note = {R package version 1.3-28.1},
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  journal = {Journal of Statistical Software}
}



%%% STRATIFIED RANDOMIZATION REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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@article{Wang2021,
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  journal = {Journal of the American Statistical Association}
}




%%% SURVEYS OF COVARIATE ADJUSTMENT IN PRACTICE %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Austin2010,
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  journal = {Statistics in Medicine}
}









%%% REVIEW ARTICLES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Benkeser2020,
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  title = {Improving precision and power in randomized trials for {COVID}-19 treatments using covariate adjustment,  for binary,  ordinal,  and time-to-event outcomes},
  journal = {Biometrics}
}




%%% COMPARING ESTIMATORS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Colantuoni2015,
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  journal = {Statistics in Medicine}
}




%%% CONTINUOUS OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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  title = {Improving Efficiency of Inferences in Randomized Clinical Trials Using Auxiliary Covariates},
  journal = {Biometrics}
}



%%% BINARY OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Ge2011,
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  journal = {Statistics in Medicine}
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@article{Steingrimsson2017,
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  title = {Improving precision by adjusting for prognostic baseline variables in randomized trials with binary outcomes,  without regression model assumptions},
  journal = {Contemporary Clinical Trials}
}




%%% ORDINAL OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Diaz2015,
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  title = {Increasing the power of the Mann-Whitney test in randomized experiments through flexible covariate adjustment},
  journal = {Statistics in Medicine}
}




%%% TIME TO EVENT %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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  journal = {The International Journal of Biostatistics}
}




%%% RESTRICTED MEAN SURVIVAL TIME %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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@article{VanLancker2021,
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%%% DOUBLY ROBUST ESTIMATORS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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  journal = {Biometrika}
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%%% NOT YET CLASSIFIED %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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%%% SANDWICH REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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%%% BOOTSTRAP REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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@article{Efron1987,
  doi = {10.1080/01621459.1987.10478410},
  url = {https://doi.org/10.1080/01621459.1987.10478410},
  year = {1987},
  month = mar,
  publisher = {Informa {UK} Limited},
  volume = {82},
  number = {397},
  pages = {171--185},
  author = {Bradley Efron},
  title = {Better Bootstrap Confidence Intervals},
  journal = {Journal of the American Statistical Association}
}

@article{DiCiccio1996,
  doi = {10.1214/ss/1032280214},
  url = {https://doi.org/10.1214/ss/1032280214},
  year = {1996},
  month = sep,
  publisher = {Institute of Mathematical Statistics},
  volume = {11},
  number = {3},
  author = {Thomas J. DiCiccio and Bradley Efron},
  title = {Bootstrap confidence intervals},
  journal = {Statistical Science}
}



%%% CLINICAL TRIALS REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Assmann2000,
  doi = {10.1016/s0140-6736(00)02039-0},
  url = {https://doi.org/10.1016/s0140-6736(00)02039-0},
  year = {2000},
  month = mar,
  publisher = {Elsevier {BV}},
  volume = {355},
  number = {9209},
  pages = {1064--1069},
  author = {Susan F Assmann and Stuart J Pocock and Laura E Enos and Linda E Kasten},
  title = {Subgroup analysis and other (mis)uses of baseline data in clinical trials},
  journal = {The Lancet}
}

@article{Schulz2010,
  doi = {10.1136/bmj.c332},
  url = {https://doi.org/10.1136/bmj.c332},
  year = {2010},
  month = mar,
  publisher = {{BMJ}},
  volume = {340},
  number = {mar23 1},
  pages = {c332--c332},
  author = {K. F Schulz and D. G Altman and D. Moher and},
  title = {{CONSORT} 2010 Statement: updated guidelines for reporting parallel group randomised trials},
  journal = {{BMJ}}
}

@article{Gamble2017,
  doi = {10.1001/jama.2017.18556},
  url = {https://doi.org/10.1001/jama.2017.18556},
  year = {2017},
  month = dec,
  publisher = {American Medical Association ({AMA})},
  volume = {318},
  number = {23},
  pages = {2337},
  author = {Carrol Gamble and Ashma Krishan and Deborah Stocken and Steff Lewis and Edmund Juszczak and Caroline Dor{\'{e}} and Paula R. Williamson and Douglas G. Altman and Alan Montgomery and Pilar Lim and Jesse Berlin and Stephen Senn and Simon Day and Yolanda Barbachano and Elizabeth Loder},
  title = {Guidelines for the Content of Statistical Analysis Plans in Clinical Trials},
  journal = {{JAMA}}
}




%%% GROUP SEQUENTIAL DESIGNS REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@book{Jennison1999,
  doi = {10.1201/9780367805326},
  url = {https://doi.org/10.1201/9780367805326},
  year = {1999},
  month = sep,
  publisher = {Chapman and Hall/{CRC}},
  author = {Christopher Jennison and Bruce W. Turnbull},
  title = {Group Sequential Methods with Applications to Clinical Trials}
}




%%% GENERAL BACKGROUND REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@book{DobsonBarnett2018,
  author = {Annette J. Dobson and Adrian G. Barnett},
  doi = {10.1201/9781315182780},
  url = {https://doi.org/10.1201/9781315182780},
  year = {2018},
  month = apr,
  publisher = {Chapman and Hall/{CRC}},
  title = {An Introduction to Generalized Linear Models,  Fourth Edition}
}

@article{McCullagh1980,
  doi = {10.1111/j.2517-6161.1980.tb01109.x},
  url = {https://doi.org/10.1111/j.2517-6161.1980.tb01109.x},
  year = {1980},
  month = jan,
  publisher = {Wiley},
  volume = {42},
  number = {2},
  pages = {109--127},
  author = {Peter McCullagh},
  title = {Regression Models for Ordinal Data},
  journal = {Journal of the Royal Statistical Society: Series B (Methodological)}
}



%%% MISTIE III EXAMPLE %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Hanley2019,
  doi = {10.1016/s0140-6736(19)30195-3},
  url = {https://doi.org/10.1016/s0140-6736(19)30195-3},
  year = {2019},
  month = mar,
  publisher = {Elsevier {BV}},
  volume = {393},
  number = {10175},
  pages = {1021--1032},
  author = {Daniel F Hanley and Richard E Thompson and Michael Rosenblum and Gayane Yenokyan and Karen Lane and Nichol McBee and Steven W Mayo and Amanda J Bistran-Hall and Dheeraj Gandhi and W Andrew Mould and Natalie Ullman and Hasan Ali and J Ricardo Carhuapoma and Carlos S Kase and Kennedy R Lees and Jesse Dawson and Alastair Wilson and Joshua F Betz and Elizabeth A Sugar and Yi Hao and Radhika Avadhani and Jean-Louis Caron and Mark R Harrigan and Andrew P Carlson and Diederik Bulters and David LeDoux and Judy Huang and Cully Cobb and Gaurav Gupta and Ryan Kitagawa and Michael R Chicoine and Hiren Patel and Robert Dodd and Paul J Camarata and Stacey Wolfe and Agnieszka Stadnik and P Lynn Money and Patrick Mitchell and Rosario Sarabia and Sagi Harnof and Pal Barzo and Andreas Unterberg and Jeanne S Teitelbaum and Weimin Wang and Craig S Anderson and A David Mendelow and Barbara Gregson and Scott Janis and Paul Vespa and Wendy Ziai and Mario Zuccarello and Issam A Awad and Azmil Abdul-Rahim and Amal Abou-Hamden and Michael Abraham and Azam Ahmed and Carlos Alarcon Alba and E. Francois Aldrich and David Altschul and Sepideh Amin-Hanjani and Doug Anderson and Safdar Ansari and David Antezana and Agnieszka Ardelt and Fuat Arikan and Marcelino Baguena and Alexandra Baker and Steven J. Barrer and Kyra J. Becker and Thomas Bergman and Azize Bostr\"{o}m and Jamie Braun and Peter Brindley and William C. Broaddus and Robert Brown and Andras Buki and Bing Cao and Ying Cao and Julian Carrion-Penagos and Julio Chalela and Tiffany Chang and Indalecio Moran Chorro and Shakeel Chowdhry and Luisa Corral and Laszlo Csiba and Jason Davies and Alberto Torres D{\'{\i}}az and Colin P. Derdeyn and Michael Diringer and Rachel Dlugash and Robert Ecker and Tracey Economas and Pedro Enriquez and Erzsebet Ezer and Yuhua Fan and Hua Feng and Douglas Franz and W. David Freeman and Matthew Fusco and Walter Galicich and Mary Leigh Gelea and Joshua Goldstein and Alejandro Carrasco Gonzalez and Christina Grabarits and Steven Greenberg and Daryl Gress and Eugene Gu and Christiana Hall and Fernando Mu{\~{n}}oz Hernandez and Robert Hoesch and Brian L. Hoh and Jennifer Houser and Rong Hu and Yi Huang and Mohammed Akbar Hussain and Salvatore Insinga and Ashutosh Jadhav and Jennifer Jaffe and Babak S. Jahromi and Jack Jallo and Michael James and Robert F. James and Brian Jankowitz and Esther Jeon and Draga Jichici and Karin Jonczak and Ben Jonker and Nicki Karlen and Naureen Keric and Thomas Kerz and Jared Knopman and Carolyn Koenig and Satish Krishnamurthy and Avinash Kumar and Inam Kureshi and John Laidlaw and Arun Lakhanpal and Julius Gene Latorre and Dana Leifer and James Leiphart and Sarah Lenington and Yunke Li and George Lopez and Darren Lovick and Christianto Lumenta and Jinbiao Luo and Matthew B. Maas and Joel MacDonald and Larami MacKenzie and Vikram Madan and Ryan Majkowski and Otto Major and Rishi Malhorta and Marc Malkoff and Halinder Mangat and Ahmed Maswadeh and Charles Matouk and Kate McArthur and Scott McCaul and Joshua Medow and Geza Mezey and Janet Mighty and David Miller and Krishna K. Mohan and Keith Muir and Lorenzo Mu{\~{n}}oz and Peter Nakaji and Alex Nee and Saman Nekoovaght-Tak and Paul Nyquist and Roddy O{\textquotesingle}Kane and Mohamed Okasha and Cian O{\textquotesingle}Kelly and Noeleen Ostapkovich and Aditya Pandey and Adrian Parry-Jones and Krissia Rivera Perla and Ania Pollack and Sean Polster and Nader Pouratian and Terry Quinn and Ventatakrishna Rajajee and Kesava Reddy and Mohammed Rehman and Ronald Reimer and Fred Rincon and Igor Rybinnik and Baltasar Sanchez and Lauren Sansing and Michael Schneck and Ludwig Schuerer and David Schul and Jeffrey Schweitzer and David B. Seder and Donald Seyfried and Kevin Sheth and Alejandro Spiotta and Michael Stechison and Katalin Szabo and Gonzalo Tamayo and Krisztian Tanczos and Philipp Taussky and John Terry and Fernando Testai and Kathrine Thomas and Carol B. Thompson and Gregory Thompson and James C. Torner and Huy Tran and Kristi Tucker and Lior Ungar and Panos Varelas and Nataly Montano Vargas and Hartmut Vatter and Chitra Venkatasubramanian and Krista Vermillion and Dennis Vollmer and Yan Wang and Ying Wang and Jiajun Wen and Louis Tony Whitworth and Byron Willis and Myriha Wrencher and Shawn E. Wright and Yongge Xu and Lisa Yanase and Xuxia Yi and Zhiyuan Yu and Ali Zomorodi},
  title = {Efficacy and safety of minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation ({MISTIE} {III}): a randomised,  controlled,  open-label,  blinded endpoint phase 3 trial},
  journal = {The Lancet}
}

@article{Bath2012,
  doi = {10.1161/strokeaha.111.641456},
  url = {https://doi.org/10.1161/strokeaha.111.641456},
  year = {2012},
  month = apr,
  publisher = {Ovid Technologies (Wolters Kluwer Health)},
  volume = {43},
  number = {4},
  pages = {1171--1178},
  author = {Philip M.W. Bath and Kennedy R. Lees and Peter D. Schellinger and Hernan Altman and Martin Bland and Cheryl Hogg and George Howard and Jeffrey L. Saver},
  title = {Statistical Analysis of the Primary Outcome in Acute Stroke Trials},
  journal = {Stroke}
}

@article{Chaisinanunkul2015,
  doi = {10.1161/strokeaha.114.008547},
  url = {https://doi.org/10.1161/strokeaha.114.008547},
  year = {2015},
  month = aug,
  publisher = {Ovid Technologies (Wolters Kluwer Health)},
  volume = {46},
  number = {8},
  pages = {2238--2243},
  author = {Napasri Chaisinanunkul and Opeolu Adeoye and Roger J. Lewis and James C. Grotta and Joseph Broderick and Tudor G. Jovin and Raul G. Nogueira and Jordan J. Elm and Todd Graves and Scott Berry and Kennedy R. Lees and Andrew D. Barreto and Jeffrey L. Saver and Anthony Furlan and Blaise Baxter and Helmi L. Lutsep and Marc Ribo and Olav Jansen and Rishi Gupta and Vitor Mendes Pereira and},
  title = {Adopting a Patient-Centered Approach to Primary Outcome Analysis of Acute Stroke Trials Using a Utility-Weighted Modified Rankin Scale},
  journal = {Stroke}
}




%%% CTN-0003 EXAMPLE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Ling2009,
  doi = {10.1111/j.1360-0443.2008.02455.x},
  url = {https://doi.org/10.1111/j.1360-0443.2008.02455.x},
  year = {2009},
  month = feb,
  publisher = {Wiley},
  volume = {104},
  number = {2},
  pages = {256--265},
  author = {Walter Ling and Maureen Hillhouse and Catherine Domier and Geetha Doraimani and Jeremy Hunter and Christie Thomas and Jessica Jenkins and Albert Hasson and Jeffrey Annon and Andrew Saxon and Jeffrey Selzer and Joshua Boverman and Richard Bilangi},
  title = {Buprenorphine tapering schedule and illicit opioid use},
  journal = {Addiction}
}




%%% CTN-030 EXAMPLE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Campbell2014,
  doi = {10.1176/appi.ajp.2014.13081055},
  url = {https://doi.org/10.1176/appi.ajp.2014.13081055},
  year = {2014},
  month = jun,
  publisher = {American Psychiatric Association Publishing},
  volume = {171},
  number = {6},
  pages = {683--690},
  author = {Aimee N.C. Campbell and Edward V. Nunes and Abigail G. Matthews and Maxine Stitzer and Gloria M. Miele and Daniel Polsky and Eva Turrigiano and Scott Walters and Erin A. McClure and Tiffany L. Kyle and Aimee Wahle and Paul Van Veldhuisen and Bruce Goldman and Dean Babcock and Patricia Quinn Stabile and Theresa Winhusen and Udi E. Ghitza},
  title = {Internet-Delivered Treatment for Substance Abuse: A Multisite Randomized Controlled Trial},
  journal = {American Journal of Psychiatry}
}