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doc: conda: mention symlinks and creating a complete port
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phil-blain committed Jan 23, 2020
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Expand Up @@ -640,6 +640,23 @@ The conda configuration expects some directories and files to be present at ``$H
This step needs to be done only once.

If you prefer that some or all of the CICE directories be located somewhere else, you can create a symlink from your home to another location:

.. code-block:: bash
# Create the CICE directories at your preferred location
cd ${somewhere}
mkdir -p cice-dirs/runs cice-dirs/baseline cice-dirs/input
# Download the required forcing from https://github.com/CICE-Consortium/CICE/wiki/CICE-Input-Data
# and untar it at cice-dirs/input
# Create a symlink to cice-dirs in your $HOME
cd $HOME
ln -s ${somewhere}/cice-dirs cice-dirs
Note: if you wish, you can also create a complete machine port for your computer by leveraging the conda configuration as a starting point. See :ref:`porting`.

Next, create the "cice" conda environment from the ``environment.yml`` file:

.. code-block:: bash
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