Skip to content

Latest commit

 

History

History
executable file
·
27 lines (20 loc) · 704 Bytes

ampliconstats_dropout_README.md

File metadata and controls

executable file
·
27 lines (20 loc) · 704 Bytes

ampliconstats_dropout README

TOC

Inputs

samtools_ampliconstats_dropout channel, which holds the sample and its ampliconstats.txt (output from samtools ampliconstats)

Function

This process calls amplicon_stat.py to parse the ampliconstats.txt file to print out the amplicon drop outs stats

Outputs

amplicon drop outs stats text file per sample

Dependencies

samtools_ampliconstats process

Note

A amplicon_dropout_summary will be created, under which are all the resulting text files

Contributing

Rong Jin