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setup.py
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setup.py
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"""Setup for the astrovascpy package."""
import importlib.util
from pathlib import Path
from setuptools import find_namespace_packages, setup
spec = importlib.util.spec_from_file_location(
"astrovascpy.version",
"astrovascpy/version.py",
)
module = importlib.util.module_from_spec(spec)
spec.loader.exec_module(module)
VERSION = module.VERSION
reqs = [
"cached-property",
"click",
"coverage",
"cython",
"h5py",
"libsonata",
"matplotlib",
"morphio",
"mpi4py",
"networkx",
"numpy",
"pandas",
"psutil",
"pyyaml",
"scipy",
"seaborn",
"tables",
"tqdm",
"trimesh",
"vascpy",
]
doc_reqs = [
"m2r2",
"sphinx",
"sphinx-bluebrain-theme",
"sphinx-click",
]
test_reqs = [
"pytest",
"pytest-mpi",
]
setup(
name="AstroVascPy",
description="Simulating blood flow in vasculature",
author="Blue Brain Project, EPFL",
long_description=Path("README.md").read_text(encoding="utf-8"),
long_description_content_type="text/markdown",
url="https://github.com/BlueBrain/AstroVascPy",
project_urls={
"Tracker": "https://github.com/BlueBrain/AstroVascpy/issues",
"Source": "https://github.com/BlueBrain/AstroVascPy",
},
license="Apache-2",
packages=find_namespace_packages(include=["astrovascpy*"]),
python_requires=">=3.11",
version=VERSION,
install_requires=reqs,
extras_require={
"docs": doc_reqs,
"test": test_reqs,
"viz": ["vtk"],
},
include_package_data=True,
classifiers=[
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Education",
"Intended Audience :: Science/Research",
"Programming Language :: Python :: 3",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
)