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Align reads against plasmid reconstructions #21

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dfornika opened this issue Nov 1, 2022 · 0 comments
Open

Align reads against plasmid reconstructions #21

dfornika opened this issue Nov 1, 2022 · 0 comments

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@dfornika
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dfornika commented Nov 1, 2022

We currently align the input reads for each sample against the closest reference plasmids. But it would also be helpful for QC and review purposes to align the reads against the plasmid reconstruction(s) themselves.
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@dfornika