A library and command-line utility for working with the UMLS Metathesaurus
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Updated
May 19, 2023 - Rust
A library and command-line utility for working with the UMLS Metathesaurus
Scripts, figures, and working notes for the participation in ImageCLEFmedical, part of the 14th CLEF Conference, 2023.
Extract Transform and Load data using UMLS
R Package for utilizing the UMLS Metathesaurus loaded into a Postgres Database
Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)
App that implements st.experimental_connection with UMLS API
This repository is dedicated to development of Python scripts which use API to UMLS MetaMap to map semantics of common data elemnts to UMLS and NCI concepts
This repository aims to speed up the process of querying and assigning relevant UMLS CUIs to fields in your data dictionary. Currently, you can customize batch query scripts that utilize the UMLS api, MetaMap api, and/or an experimental semantic search approach with vector embeddings. Further development in progress.
Python client for the UMLS REST API https://documentation.uts.nlm.nih.gov/rest/home.html
MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)
Weakly supervised medical named entity classification
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