discoAnt.yml

name: discoAnt
channels:
  - conda-forge
  - bioconda
  - anaconda
  - r
  - defaults
dependencies:
  - bcbio-gff
  - bedtools
  - biopython=1.79
  - bx-python
  - gffread
  - gffcompare
  - minimap2
  - numpy
  - openssl
  - pybedtools
  - pysam
  - python>=3.7.6
  - r>=3.2.0
  - r-biocmanager
  - r-dplyr
  - r-stringi
  - r-optparse
  - samtools
  - scipy
  - salmon=0.14.2
  - bioconductor-bambu
  - cython
  - scikit-learn