{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"AE_20211201_YAW_SWVANDERLAAN_HDAC9","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-01T00:17:19.657Z"}},{"type":"Public","name":"gwas2cojo","owner":"CirculatoryHealth","isFork":false,"description":"gwas2cojo","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T20:02:09.047Z"}},{"type":"Public archive","name":"QTLToolKit2","owner":"CirculatoryHealth","isFork":true,"description":"A workflow based on QTLtools and tensorQTL to run cis- and trans-QTL analyses (SLURM based).","allTopics":["qtl","qtl-analysis"],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":6,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-20T19:46:43.981Z"}},{"type":"Public","name":"LoFTK","owner":"CirculatoryHealth","isFork":false,"description":"The Loss-of-Function ToolKit (LoFTK) allows efficient and automated prediction of LoF variants from both genotyped and sequenced genomes, identifying genes that are inactive in one or two copies, and providing summary statistics for downstream analyses.","allTopics":["loss-of-function","lofs"],"primaryLanguage":{"name":"Perl","color":"#0298c3"},"pullRequestCount":1,"issueCount":1,"starsCount":8,"forksCount":2,"license":"Creative Commons Attribution Share Alike 4.0 International","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-05T12:50:57.938Z"}},{"type":"Public","name":"AAO_IschemicStroke","owner":"CirculatoryHealth","isFork":false,"description":"Additional figures and analyses for the age at onset of ischemic stroke meta-GWAS. ","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-01T20:37:34.915Z"}},{"type":"Public","name":"EntropyMasker","owner":"CirculatoryHealth","isFork":false,"description":"A fully automated approach for separating foreground (tissue) and background in bright-field microscopic whole-slide images of (immuno)histologically stained samples.","allTopics":["histology","whole-slide-imaging","image-masking"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":2,"issueCount":2,"starsCount":2,"forksCount":1,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-04T00:19:35.362Z"}},{"type":"Public","name":"ExpressScan_Glycophorin","owner":"CirculatoryHealth","isFork":false,"description":"Scripts used for the \"Glycophorin C in carotid atherosclerotic plaque reflects intraplaque hemorrhage and pre-procedural neurological symptoms\" paper.","allTopics":["cellprofiler","slidetoolkit","digital-pathology","whole-slide-imaging","plaque","atherosclerosis","plaque-characteristic","expressscan"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-12T19:20:53.954Z"}},{"type":"Public","name":"CHARGE_1000G_CAC","owner":"CirculatoryHealth","isFork":false,"description":"CHARGE Consortium: collaboration for mapping targets from 1000G GWAS on coronary artery calcification (CAC) with Maryam Kavousi, Maxime Bos, Clint L. Miller, and Pat Peyser.","allTopics":["gwas","rnaseq","scrna-seq","genome-wide-association-studies","coronary-artery-calcification","regional-association-plots"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-29T13:02:35.626Z"}},{"type":"Public","name":"EndoMT_in_AE","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-26T10:11:25.649Z"}},{"type":"Public","name":"Inherited-cardiomyopathies","owner":"CirculatoryHealth","isFork":false,"description":"This project aimed to to assess the prevalence of pathogenic variants associated with ARVC, DCM or HCM in the general UK population using UK Biobank data.","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":"Creative Commons Attribution Share Alike 4.0 International","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-03T13:19:55.423Z"}},{"type":"Public","name":"AE_20190912_010_MDICHGANS_SWVDLAAN_IL6_MCP1","owner":"CirculatoryHealth","isFork":false,"description":"Project with the group of Martin Dichgans regarding MCP1 in plaques.","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-18T13:18:43.081Z"}},{"type":"Public","name":"AE_171212_9p21_IRAK4","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-18T13:16:36.062Z"}},{"type":"Public","name":"Sex_differences_scRNA","owner":"CirculatoryHealth","isFork":false,"description":"Sex differences in atherosclerotic lesions are driven by both cell specific RNA expression and cellular composition","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-13T10:48:38.786Z"}},{"type":"Public","name":"AE_OLINK_LPL_and_MACE","owner":"CirculatoryHealth","isFork":false,"description":"Accompanying 'Plasma Lipoprotein Lipase is associated with Risk for Future Major Adverse Cardiovascular Events in Patients Following Carotid Endarterectomy'","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-16T08:41:41.044Z"}},{"type":"Public template","name":"kai6662.github.io","owner":"CirculatoryHealth","isFork":true,"description":"(Pre-release) An easy-to-use, flexible website template for labs, with automatic citations, GitHub tag imports, pre-built components, and more","allTopics":[],"primaryLanguage":{"name":"SCSS","color":"#c6538c"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":290,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-13T18:13:19.261Z"}},{"type":"Public","name":"MicroanatomyHumanPlaque_scRNAseq","owner":"CirculatoryHealth","isFork":false,"description":"Scripts accompanying \"Microanatomy of the human atherosclerotic plaque by single-cell transcriptomics\"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":12,"forksCount":5,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-20T14:48:37.443Z"}},{"type":"Public","name":"gwas2single","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-20T14:48:13.348Z"}},{"type":"Public","name":"idiverge","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Creative Commons Attribution 4.0 International","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-09T15:56:17.576Z"}},{"type":"Public","name":".github","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-08T09:01:02.116Z"}},{"type":"Public","name":"UKBioPick","owner":"CirculatoryHealth","isFork":false,"description":"The UKBioPick allows extraction of interested UK Biobank phenotypes.","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":2,"starsCount":2,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-02-16T11:59:10.248Z"}},{"type":"Public","name":"BlandAltman","owner":"CirculatoryHealth","isFork":false,"description":"Example code of the Bland-Altman test.","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-10-13T12:05:10.117Z"}},{"type":"Public","name":"PlaqueCluster","owner":"CirculatoryHealth","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":2,"license":"Creative Commons Zero v1.0 Universal","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-11T19:04:00.527Z"}}],"repositoryCount":22,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"CirculatoryHealth repositories"}