From a8132ef5242b3f75be7936d14b7c3e8f17bff08a Mon Sep 17 00:00:00 2001
From: Jover Lee <joverlee521@gmail.com>
Date: Mon, 17 Jun 2024 11:08:40 -0700
Subject: [PATCH] Support Snakemake --report

Resolves https://github.com/nextstrain/docker-base/issues/218
---
 Dockerfile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Dockerfile b/Dockerfile
index 35d5dc4..fd2b564 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -260,7 +260,7 @@ RUN python3 -m venv /usr/local/libexec/awscli \
 # Install Snakemake and related optional dependencies.
 # Pinned to 7.32.3 for stability (2023-09-09)
 # Pulp>=2.8.0 breaks snakemake <=8.1.1, see https://github.com/snakemake/snakemake/issues/2607
-RUN pip3 install snakemake==7.32.3 "pulp<2.8"
+RUN pip3 install snakemake[reports]==7.32.3 "pulp<2.8"
 # Google Cloud Storage package is required for Snakemake to fetch remote files
 # from Google Storage URIs.
 RUN pip3 install google-cloud-storage==2.7.0