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thesis.tex
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thesis.tex
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%\documentclass[12pt,openright]{report}
\documentclass[12pt,twoside,openright]{report}
\pdfoutput=1 % ensure that arXiv uses pdflatex
% note that the documentclass can take other option such as
% twoside - for double sided printing
% openright - if double side chapters always start on odd pages
% openany - if double side chapters start on the next page even or odd
% 12pt can be replaced by 11pt
\usepackage[online]{suthesis-2e}
\usepackage{amsmath}
\usepackage{amssymb}
\usepackage{amsthm}
\usepackage{bbm} %for indicator function
\usepackage{enumerate}
\usepackage{epsfig}
\usepackage{perry-thesis-macros}
\usepackage{tikz}
\usepackage{mathrsfs}
\usepackage{unicode-math} %to fix lualatex black bug http://tex.stackexchange.com/questions/61952/problem-compiling-some-math-using-lualatex
%\usepackage{breqn} %because \left and \right can't go on multiple lines
\usepackage{natbib}
\DeclareGraphicsExtensions{.png,.pdf,.tex}
\newcommand{\dirsep}{/}
\newcommand{\dirprefix}{}
\newcommand{\thesischapter}[1]{\dirprefix #1\dirsep #1}
\newcommand{\includechapter}[1]{
\graphicspath{{\dirprefix #1\dirsep plots\dirsep}}
\include{\thesischapter{#1}}
}
\renewcommand{\bibname}{References}
\providecommand{\norm}[1]{\lVert#1\rVert}
\newtheorem{theorem}{Theorem}
\newtheorem{assumption}[theorem]{Assumption}
\newtheorem{conjecture}[theorem]{Conjecture}
\newtheorem{corollary}[theorem]{Corollary}
\newtheorem{definition}[theorem]{Definition}
\newtheorem{lemma}[theorem]{Lemma}
\newtheorem{remark}[theorem]{Remark}
\newtheorem{proposition}[theorem]{Proposition}
\newtheorem*{thma}{Theorem 1.8}
\numberwithin{equation}{chapter}
\numberwithin{algorithm}{chapter}
\numberwithin{theorem}{chapter}
\title{Topics in Two-Sample Testing}
\author{Nelson C. Ray}
\submitdate{May 2013}
\copyrightyear{2013}
\dept{Statistics}
\principaladviser{Susan P. Holmes}
\firstreader{Persi W. Diaconis}
\secondreader{Bradley Efron}
\thirdreader{Jerome H. Friedman}
\includeonly{
acknowledgment,
{\thesischapter{introduction}},
{\thesischapter{steins-method}},
{\thesischapter{stein-proof}},
{\thesischapter{simulations}},
{\thesischapter{friedman-test}},
{\thesischapter{MKL}},
{\thesischapter{auxiliary-app}},
{\thesischapter{steins-method-app}},
{\thesischapter{stein-proof-app}}%,
%bibliography
}
\begin{document}
\beforepreface
\prefacesection{Abstract}
\input{abstract}
\include{acknowledgment}
%\figurespagefalse
%\tablespagefalse
\afterpreface
\includechapter{introduction}
\includechapter{steins-method}
\includechapter{stein-proof}
\includechapter{simulations}
\includechapter{friedman-test}
\includechapter{MKL}
\appendix
\includechapter{auxiliary-app}
\includechapter{steins-method-app}
\includechapter{stein-proof-app}
\bibliographystyle{plain}
\bibliography{ncray}
%\onlinesignature
\end{document}