diff --git a/.build/Dockerfile b/.build/Dockerfile index 23ff5c2..a82978f 100755 --- a/.build/Dockerfile +++ b/.build/Dockerfile @@ -371,71 +371,6 @@ USER ${NB_UID} WORKDIR "${HOME}" - ############################################################################ - ################ Dependency: jupyter/datascience-notebook ################## - ############################################################################ - -# Copyright (c) Jupyter Development Team. -# Distributed under the terms of the Modified BSD License. -ARG OWNER=jupyter - -LABEL maintainer="Jupyter Project " - -# Fix: https://github.com/hadolint/hadolint/wiki/DL4006 -# Fix: https://github.com/koalaman/shellcheck/wiki/SC3014 -SHELL ["/bin/bash", "-o", "pipefail", "-c"] - -USER root - -# R pre-requisites -RUN apt-get update --yes && \ - apt-get install --yes --no-install-recommends \ - fonts-dejavu \ - gfortran \ - gcc && \ - apt-get clean && rm -rf /var/lib/apt/lists/* - -# Julia dependencies -# install Julia packages in /opt/julia instead of ${HOME} -ENV JULIA_DEPOT_PATH=/opt/julia \ - JULIA_PKGDIR=/opt/julia - -# Setup Julia -RUN /opt/setup-scripts/setup-julia.bash - -USER ${NB_UID} - -# Setup IJulia kernel & other packages -RUN /opt/setup-scripts/setup-julia-packages.bash - -# R packages including IRKernel which gets installed globally. -# r-e1071: dependency of the caret R package -RUN mamba install --yes \ - 'r-base' \ - 'r-caret' \ - 'r-crayon' \ - 'r-devtools' \ - 'r-e1071' \ - 'r-forecast' \ - 'r-hexbin' \ - 'r-htmltools' \ - 'r-htmlwidgets' \ - 'r-irkernel' \ - 'r-nycflights13' \ - 'r-randomforest' \ - 'r-rcurl' \ - 'r-rmarkdown' \ - 'r-rodbc' \ - 'r-rsqlite' \ - 'r-shiny' \ - 'r-tidymodels' \ - 'r-tidyverse' \ - 'rpy2' \ - 'unixodbc' && \ - mamba clean --all -f -y && \ - fix-permissions "${CONDA_DIR}" && \ - fix-permissions "/home/${NB_USER}" - ############################################################################ ########################## Dependency: gpulibs ############################# ############################################################################