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setup.py
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setup.py
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#!/usr/bin/env python
"""fungidb-tools setup file."""
from setuptools import setup, find_packages
def readme():
with open('README.md') as f:
return f.read()
setup(name='fungidb_tools',
version='0.1',
description='Tools for maintaining and developing FungiDB',
author='Edward Liaw',
author_email='ed.liaw@fungidb.org',
long_description=readme(),
url='http://github.com/edliaw/fungidb_tools',
packages=find_packages(),
scripts=[
'scripts/datasets/generate_datasets',
'scripts/datasets/pull_spreadsheet',
'scripts/datasets/download_sra',
'scripts/datasets/download_genbank',
'scripts/isf/format_fasta',
'scripts/isf/format_gff',
'scripts/isf/format_mips',
'scripts/isf/gen_fasta_chr_map',
'scripts/isf/gen_genbank_chr_map',
'scripts/isf/split_algids',
'scripts/isf/undo_algids',
'scripts/isf/extract_gff3_attr',
'scripts/isf/extract_products_broad',
'scripts/isf/extract_products_genbank',
'scripts/isf/extract_products_jgi',
],
test_suite="fungidb_tools.tests",
install_requires=[
'future',
'biopython',
'lxml',
'gspread',
'decorator',
],)