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[CZID-8703] [CZID-8778] log taxa and number of lines in index generat… Integration Tests #1587: Commit 24a648b pushed by ninabernick
November 1, 2023 20:21 41s main
main
November 1, 2023 20:21 41s
formatting Integration Tests #1586: Commit 0d07d11 pushed by ninabernick
November 1, 2023 18:29 35s ninabernick/test_number_lines
ninabernick/test_number_lines
November 1, 2023 18:29 35s
log superkingdom Integration Tests #1585: Commit 7081939 pushed by ninabernick
November 1, 2023 18:27 38s ninabernick/test_number_lines
ninabernick/test_number_lines
November 1, 2023 18:27 38s
formatting Integration Tests #1584: Commit e777b26 pushed by ninabernick
November 1, 2023 17:56 13m 50s ninabernick/fix_phage_categorization
ninabernick/fix_phage_categorization
November 1, 2023 17:56 13m 50s
assign phage based on family name Integration Tests #1583: Commit 480bbb0 pushed by ninabernick
November 1, 2023 17:53 16m 17s ninabernick/fix_phage_categorization
ninabernick/fix_phage_categorization
November 1, 2023 17:53 16m 17s
[CZID-8703] unit test lineages csv generation (#298) Integration Tests #1582: Commit 362a9e1 pushed by rzlim08
October 31, 2023 18:29 16m 10s 62dc96a
62dc96a
October 31, 2023 18:29 16m 10s
reformat descriptions Integration Tests #1581: Commit 634e145 pushed by ninabernick
October 31, 2023 16:21 9m 20s ninabernick/ont_step_descriptions
ninabernick/ont_step_descriptions
October 31, 2023 16:21 9m 20s
Remove use of subsampled reads Integration Tests #1580: Commit d7def8e pushed by lvreynoso
October 30, 2023 19:09 36s lvreynoso/no_amr_subsampling
lvreynoso/no_amr_subsampling
October 30, 2023 19:09 36s
Concat subsampled reads to reads pulled from duplicated non-host reads Integration Tests #1579: Commit 5ef5fcf pushed by lvreynoso
October 30, 2023 18:58 6m 8s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
October 30, 2023 18:58 6m 8s
update test Integration Tests #1578: Commit 85d1de9 pushed by ninabernick
October 27, 2023 20:41 37s ninabernick/test_number_lines
ninabernick/test_number_lines
October 27, 2023 20:41 37s
change file type to gzip Integration Tests #1577: Commit 08c2f3c pushed by ninabernick
October 27, 2023 18:29 38s ninabernick/test_number_lines
ninabernick/test_number_lines
October 27, 2023 18:29 38s
Add debugging lines Integration Tests #1576: Commit 827ab0b pushed by lvreynoso
October 27, 2023 17:51 5m 39s lvreynoso/rgi_6_0_3
lvreynoso/rgi_6_0_3
October 27, 2023 17:51 5m 39s
rename file and format Integration Tests #1575: Commit 3c7e85b pushed by ninabernick
October 27, 2023 17:30 16m 17s ninabernick/test_number_lines
ninabernick/test_number_lines
October 27, 2023 17:30 16m 17s
use gzip and output files from workflow Integration Tests #1574: Commit 0ebf127 pushed by ninabernick
October 26, 2023 21:09 1m 7s ninabernick/test_number_lines
ninabernick/test_number_lines
October 26, 2023 21:09 1m 7s
string formatting Integration Tests #1573: Commit 80ce088 pushed by ninabernick
October 26, 2023 20:57 36s ninabernick/test_number_lines
ninabernick/test_number_lines
October 26, 2023 20:57 36s
[CZID-8703] unit test lineages csv generation (#298) Integration Tests #1572: Commit 362a9e1 pushed by ninabernick
October 26, 2023 20:51 1m 8s main
main
October 26, 2023 20:51 1m 8s
Fix mislabled input keys in tests Integration Tests #1571: Commit 1660bf5 pushed by lvreynoso
October 26, 2023 17:58 38s lvreynoso/rgi_6_0_3
lvreynoso/rgi_6_0_3
October 26, 2023 17:58 38s
Use pip3 install instead of manual git and python setup commands Integration Tests #1570: Commit 19da149 pushed by lvreynoso
October 26, 2023 17:34 1m 8s lvreynoso/rgi_6_0_3
lvreynoso/rgi_6_0_3
October 26, 2023 17:34 1m 8s
Use rgi from arpcard repo, tag v6.0.3 Integration Tests #1569: Commit 5390e9c pushed by lvreynoso
October 26, 2023 17:10 5m 36s lvreynoso/rgi_6_0_3
lvreynoso/rgi_6_0_3
October 26, 2023 17:10 5m 36s
string formatting Integration Tests #1568: Commit 3bc43b1 pushed by ninabernick
October 25, 2023 20:51 40s ninabernick/test_number_lines
ninabernick/test_number_lines
October 25, 2023 20:51 40s
update comments and adjust log level Integration Tests #1567: Commit 4e1ba44 pushed by ninabernick
October 25, 2023 18:36 57s ninabernick/test_number_lines
ninabernick/test_number_lines
October 25, 2023 18:36 57s
Merge branch 'ninabernick/unit-test-lineages' into ninabernick/test_n… Integration Tests #1566: Commit 420fe86 pushed by ninabernick
October 25, 2023 16:26 16m 30s ninabernick/test_number_lines
ninabernick/test_number_lines
October 25, 2023 16:26 16m 30s
formatting Integration Tests #1565: Commit f5cb9a3 pushed by ninabernick
October 23, 2023 17:49 10m 22s ninabernick/unit-test-lineages
ninabernick/unit-test-lineages
October 23, 2023 17:49 10m 22s
formatting Integration Tests #1564: Commit 05ec496 pushed by ninabernick
October 23, 2023 17:42 16m 15s ninabernick/test_number_lines
ninabernick/test_number_lines
October 23, 2023 17:42 16m 15s
single logging call Integration Tests #1563: Commit 0e6a0ed pushed by ninabernick
October 20, 2023 21:43 17m 5s ninabernick/test_number_lines
ninabernick/test_number_lines
October 20, 2023 21:43 17m 5s
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