From 0d6c5fdc15c174c29edf0c9dfd1145014d1fd96e Mon Sep 17 00:00:00 2001 From: Manasa Venkatakrishnan <14958785+manasaV3@users.noreply.github.com> Date: Tue, 5 Mar 2024 17:21:22 -0800 Subject: [PATCH] Updating canonical tomogram selection for gjensen (#22) --- .../dataset_configs/gjensen/10054.yaml | 2 +- .../dataset_configs/gjensen/10105.yaml | 2 +- .../dataset_configs/gjensen/10108.yaml | 2 +- .../dataset_configs/gjensen/10145.yaml | 26 +-- .../dataset_configs/gjensen/10176.yaml | 26 +-- .../dataset_configs/gjensen/10209.yaml | 4 +- .../dataset_configs/gjensen/10248.yaml | 26 +-- .../dataset_configs/gjensen/10261.yaml | 2 +- .../dataset_configs/gjensen/10268.yaml | 4 +- .../dataset_configs/gjensen/10276.yaml | 2 +- .../dataset_configs/gjensen/10289.yaml | 26 +-- .../dataset_configs/gjensen/10290.yaml | 26 +-- .../dataset_configs/gjensen/10291.yaml | 26 +-- .../dataset_configs/gjensen/10292.yaml | 26 +-- .../dataset_configs/gjensen/10296.yaml | 2 +- .../dataset_configs/gjensen/10297.yaml | 2 +- .../dataset_configs/gjensen/10298.yaml | 26 +-- .../dataset_configs/gjensen/10299.yaml | 26 +-- .../gjensen/run_data_map/10054.csv | 184 +++++++++--------- .../gjensen/run_data_map/10055.csv | 46 ++--- .../gjensen/run_data_map/10061.csv | 52 ++--- .../gjensen/run_data_map/10062.csv | 74 +++---- .../gjensen/run_data_map/10063.csv | 2 +- .../gjensen/run_data_map/10064.csv | 80 ++++---- .../gjensen/run_data_map/10065.csv | 38 ++-- .../gjensen/run_data_map/10066.csv | 42 ++-- .../gjensen/run_data_map/10068.csv | 18 +- .../gjensen/run_data_map/10069.csv | 10 +- .../gjensen/run_data_map/10070.csv | 64 +++--- .../gjensen/run_data_map/10074.csv | 22 +-- .../gjensen/run_data_map/10075.csv | 16 +- .../gjensen/run_data_map/10077.csv | 70 +++---- .../gjensen/run_data_map/10080.csv | 24 +-- .../gjensen/run_data_map/10081.csv | 38 ++-- .../gjensen/run_data_map/10084.csv | 94 ++++----- .../gjensen/run_data_map/10097.csv | 8 +- .../gjensen/run_data_map/10105.csv | 38 ++-- .../gjensen/run_data_map/10106.csv | 8 +- .../gjensen/run_data_map/10108.csv | 22 +-- .../gjensen/run_data_map/10145.csv | 60 +++--- .../gjensen/run_data_map/10155.csv | 2 +- .../gjensen/run_data_map/10156.csv | 6 +- .../gjensen/run_data_map/10157.csv | 8 +- .../gjensen/run_data_map/10176.csv | 44 ++--- .../gjensen/run_data_map/10248.csv | 66 +++---- .../gjensen/run_data_map/10261.csv | 92 ++++----- .../gjensen/run_data_map/10263.csv | 2 +- .../gjensen/run_data_map/10268.csv | 56 +++--- .../gjensen/run_data_map/10276.csv | 64 +++--- .../gjensen/run_data_map/10288.csv | 12 +- .../gjensen/run_data_map/10289.csv | 70 +++---- .../gjensen/run_data_map/10290.csv | 72 +++---- .../gjensen/run_data_map/10291.csv | 68 +++---- .../gjensen/run_data_map/10292.csv | 80 ++++---- .../gjensen/run_data_map/10293.csv | 8 +- .../gjensen/run_data_map/10294.csv | 30 +-- .../gjensen/run_data_map/10295.csv | 6 +- .../gjensen/run_data_map/10296.csv | 132 ++++++------- .../gjensen/run_data_map/10297.csv | 52 ++--- .../gjensen/run_data_map/10298.csv | 68 +++---- .../gjensen/run_data_map/10299.csv | 42 ++-- ingestion_tools/scripts/gjensen_config.py | 42 ++-- 62 files changed, 1141 insertions(+), 1147 deletions(-) diff --git a/ingestion_tools/dataset_configs/gjensen/10054.yaml b/ingestion_tools/dataset_configs/gjensen/10054.yaml index 4f86b7d0c..e10b988ca 100644 --- a/ingestion_tools/dataset_configs/gjensen/10054.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10054.yaml @@ -89,7 +89,7 @@ tomograms: reconstruction_method: '{tomo-reconstruction_method}' reconstruction_software: '{tomo-reconstruction_software}' tomogram_version: 1 - voxel_spacing: 16.145 + voxel_spacing: '{tomo-voxel_spacing}' annotations: {} standardization_config: destination_prefix: '10054' diff --git a/ingestion_tools/dataset_configs/gjensen/10105.yaml b/ingestion_tools/dataset_configs/gjensen/10105.yaml index 332bc92eb..b22fe27cd 100644 --- a/ingestion_tools/dataset_configs/gjensen/10105.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10105.yaml @@ -86,7 +86,7 @@ tomograms: z: 0 processing: raw processing_software: '{tomo-processing_software}' - reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 voxel_spacing: '{tomo-voxel_spacing}' diff --git a/ingestion_tools/dataset_configs/gjensen/10108.yaml b/ingestion_tools/dataset_configs/gjensen/10108.yaml index 05e893843..255afd1cc 100644 --- a/ingestion_tools/dataset_configs/gjensen/10108.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10108.yaml @@ -86,7 +86,7 @@ tomograms: z: 0 processing: raw processing_software: IMOD - reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 voxel_spacing: '{tomo-voxel_spacing}' diff --git a/ingestion_tools/dataset_configs/gjensen/10145.yaml b/ingestion_tools/dataset_configs/gjensen/10145.yaml index eb510df44..abc505714 100644 --- a/ingestion_tools/dataset_configs/gjensen/10145.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10145.yaml @@ -58,6 +58,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 160.0 tomograms: + voxel_spacing: 16.145 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -75,21 +88,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' annotations: {} standardization_config: destination_prefix: '10145' diff --git a/ingestion_tools/dataset_configs/gjensen/10176.yaml b/ingestion_tools/dataset_configs/gjensen/10176.yaml index 0c204190a..fd647cc76 100644 --- a/ingestion_tools/dataset_configs/gjensen/10176.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10176.yaml @@ -64,6 +64,19 @@ tiltseries: tilting_scheme: min to max tilt total_flux: 150.0 tomograms: + voxel_spacing: 18.919999999999998 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - IMOD + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -81,21 +94,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - IMOD authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: 18.919999999999998 annotations: {} standardization_config: destination_prefix: '10176' diff --git a/ingestion_tools/dataset_configs/gjensen/10209.yaml b/ingestion_tools/dataset_configs/gjensen/10209.yaml index 6edb73f55..c1503e78f 100644 --- a/ingestion_tools/dataset_configs/gjensen/10209.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10209.yaml @@ -44,7 +44,7 @@ tiltseries: energy_filter: GIF image_corrector: null phase_plate: false - pixel_spacing: 7.8 + pixel_spacing: 7.800000000000001 spherical_aberration_constant: 2.0 tilt_alignment_software: RAPTOR tilt_axis: 0.0 @@ -57,7 +57,7 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 200.0 tomograms: - voxel_spacing: 7.8 + voxel_spacing: 7.800000000000001 reconstruction_method: Weighted back projection reconstruction_software: IMOD fiducial_alignment_status: FIDUCIAL diff --git a/ingestion_tools/dataset_configs/gjensen/10248.yaml b/ingestion_tools/dataset_configs/gjensen/10248.yaml index f0804dae3..365ec35e1 100644 --- a/ingestion_tools/dataset_configs/gjensen/10248.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10248.yaml @@ -58,19 +58,6 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 200.0 tomograms: - voxel_spacing: 18.919999999999998 - reconstruction_method: Weighted back projection - reconstruction_software: IMOD - fiducial_alignment_status: FIDUCIAL - ctf_corrected: null - processing: raw - processing_software: null - align_softwares: - - RAPTOR - offset: - x: 0 - y: 0 - z: 0 affine_transformation_matrix: - - 1 - 0 @@ -88,8 +75,21 @@ tomograms: - 0 - 0 - 1 + align_softwares: + - RAPTOR authors: *id001 + ctf_corrected: null + fiducial_alignment_status: FIDUCIAL + offset: + x: 0 + y: 0 + z: 0 + processing: raw + processing_software: null + reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_software: IMOD tomogram_version: 1 + voxel_spacing: '{tomo-voxel_spacing}' annotations: {} standardization_config: destination_prefix: '10248' diff --git a/ingestion_tools/dataset_configs/gjensen/10261.yaml b/ingestion_tools/dataset_configs/gjensen/10261.yaml index ce0f46847..00de2f4f9 100644 --- a/ingestion_tools/dataset_configs/gjensen/10261.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10261.yaml @@ -88,7 +88,7 @@ tomograms: reconstruction_method: '{tomo-reconstruction_method}' reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' + voxel_spacing: 16.145 annotations: {} standardization_config: destination_prefix: '10261' diff --git a/ingestion_tools/dataset_configs/gjensen/10268.yaml b/ingestion_tools/dataset_configs/gjensen/10268.yaml index 67da7b8d9..75caff8cb 100644 --- a/ingestion_tools/dataset_configs/gjensen/10268.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10268.yaml @@ -86,10 +86,10 @@ tomograms: z: 0 processing: raw processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' + voxel_spacing: 13.059000000000001 annotations: {} standardization_config: destination_prefix: '10268' diff --git a/ingestion_tools/dataset_configs/gjensen/10276.yaml b/ingestion_tools/dataset_configs/gjensen/10276.yaml index 8ef6b48db..c8cd37fea 100644 --- a/ingestion_tools/dataset_configs/gjensen/10276.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10276.yaml @@ -89,7 +89,7 @@ tomograms: reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' + voxel_spacing: 13.059000000000001 annotations: {} standardization_config: destination_prefix: '10276' diff --git a/ingestion_tools/dataset_configs/gjensen/10289.yaml b/ingestion_tools/dataset_configs/gjensen/10289.yaml index 8d87f7f29..9bd76b3ba 100644 --- a/ingestion_tools/dataset_configs/gjensen/10289.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10289.yaml @@ -58,6 +58,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 150.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -75,21 +88,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: 15.64 annotations: {} standardization_config: destination_prefix: '10289' diff --git a/ingestion_tools/dataset_configs/gjensen/10290.yaml b/ingestion_tools/dataset_configs/gjensen/10290.yaml index 42bc90d56..92a32baa1 100644 --- a/ingestion_tools/dataset_configs/gjensen/10290.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10290.yaml @@ -58,6 +58,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 150.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -75,21 +88,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' annotations: {} standardization_config: destination_prefix: '10290' diff --git a/ingestion_tools/dataset_configs/gjensen/10291.yaml b/ingestion_tools/dataset_configs/gjensen/10291.yaml index 34eecd205..e49d0ab62 100644 --- a/ingestion_tools/dataset_configs/gjensen/10291.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10291.yaml @@ -58,6 +58,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 180.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -75,21 +88,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: '{tomo-voxel_spacing}' annotations: {} standardization_config: destination_prefix: '10291' diff --git a/ingestion_tools/dataset_configs/gjensen/10292.yaml b/ingestion_tools/dataset_configs/gjensen/10292.yaml index fe56589eb..c45df5727 100644 --- a/ingestion_tools/dataset_configs/gjensen/10292.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10292.yaml @@ -58,6 +58,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 150.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -75,21 +88,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: 15.64 annotations: {} standardization_config: destination_prefix: '10292' diff --git a/ingestion_tools/dataset_configs/gjensen/10296.yaml b/ingestion_tools/dataset_configs/gjensen/10296.yaml index c3734c80c..82fcd673b 100644 --- a/ingestion_tools/dataset_configs/gjensen/10296.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10296.yaml @@ -85,7 +85,7 @@ tomograms: z: 0 processing: raw processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 voxel_spacing: '{tomo-voxel_spacing}' diff --git a/ingestion_tools/dataset_configs/gjensen/10297.yaml b/ingestion_tools/dataset_configs/gjensen/10297.yaml index 04caeceb3..c6eb92dff 100644 --- a/ingestion_tools/dataset_configs/gjensen/10297.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10297.yaml @@ -85,7 +85,7 @@ tomograms: z: 0 processing: raw processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' + reconstruction_method: Weighted back projection reconstruction_software: IMOD tomogram_version: 1 voxel_spacing: '{tomo-voxel_spacing}' diff --git a/ingestion_tools/dataset_configs/gjensen/10298.yaml b/ingestion_tools/dataset_configs/gjensen/10298.yaml index 0b17d2581..2828a566a 100644 --- a/ingestion_tools/dataset_configs/gjensen/10298.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10298.yaml @@ -57,6 +57,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 150.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -74,21 +87,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: 15.64 annotations: {} standardization_config: destination_prefix: '10298' diff --git a/ingestion_tools/dataset_configs/gjensen/10299.yaml b/ingestion_tools/dataset_configs/gjensen/10299.yaml index 3cff48226..ced8d96d6 100644 --- a/ingestion_tools/dataset_configs/gjensen/10299.yaml +++ b/ingestion_tools/dataset_configs/gjensen/10299.yaml @@ -57,6 +57,19 @@ tiltseries: tilting_scheme: starting tilt to max then min total_flux: 150.0 tomograms: + voxel_spacing: 15.64 + reconstruction_method: Weighted back projection + reconstruction_software: IMOD + fiducial_alignment_status: FIDUCIAL + ctf_corrected: null + processing: raw + processing_software: null + align_softwares: + - RAPTOR + offset: + x: 0 + y: 0 + z: 0 affine_transformation_matrix: - - 1 - 0 @@ -74,21 +87,8 @@ tomograms: - 0 - 0 - 1 - align_softwares: - - RAPTOR authors: *id001 - ctf_corrected: null - fiducial_alignment_status: FIDUCIAL - offset: - x: 0 - y: 0 - z: 0 - processing: raw - processing_software: null - reconstruction_method: '{tomo-reconstruction_method}' - reconstruction_software: IMOD tomogram_version: 1 - voxel_spacing: 15.64 annotations: {} standardization_config: destination_prefix: '10299' diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10054.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10054.csv index f44e8414d..02206ae33 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10054.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10054.csv @@ -1,92 +1,92 @@ -run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_step -dga2016-09-08-1,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50001.mrc,1.0 -dga2016-09-08-2,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50002.mrc,1.0 -dga2016-09-08-3,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50003.mrc,1.0 -dga2016-09-08-4,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50004.mrc,1.0 -dga2016-09-08-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50005.mrc,1.0 -dga2016-09-09-1,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50006.mrc,1.5 -dga2016-09-09-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50007.mrc,1.5 -dga2016-09-09-3,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50008.mrc,1.5 -dga2016-09-09-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50009.mrc,1.5 -dga2016-09-09-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50010.mrc,1.5 -dga2016-09-09-6,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50011.mrc,1.5 -dga2016-09-09-7,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50012.mrc,1.5 -dga2016-09-09-8,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50013.mrc,1.5 -dga2016-09-09-9,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/Coxiella_Wt_D50014.mrc,1.5 -dga2016-09-09-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50015.mrc,1.5 -dga2016-09-09-11,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50016.mrc,1.5 -dga2016-09-09-12,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50017.mrc,1.5 -dga2016-09-09-13,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50018.mrc,1.5 -dga2016-09-09-14,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50019.mrc,1.5 -dga2016-09-09-15,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50020.mrc,1.5 -dga2016-09-09-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50021.mrc,1.5 -dga2016-09-09-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50022.mrc,1.5 -dga2016-09-09-18,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50023.mrc,1.5 -dga2016-09-09-19,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50024.mrc,1.5 -dga2016-09-09-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50025.mrc,1.5 -dga2016-09-09-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50026.mrc,1.5 -dga2016-09-09-22,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50027.mrc,1.5 -dga2016-09-09-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50028.mrc,1.5 -dga2016-09-09-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50029.mrc,1.5 -dga2016-09-09-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50030.mrc,1.5 -dga2016-09-09-26,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50031.mrc,1.5 -dga2016-09-09-27,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50032.mrc,1.5 -dga2016-09-09-28,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50033.mrc,1.5 -dga2016-09-09-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50034.mrc,1.5 -dga2016-09-09-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50035.mrc,1.5 -dga2016-09-09-31,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50036.mrc,1.5 -dga2016-09-09-32,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50037.mrc,1.5 -dga2016-09-09-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50038.mrc,1.5 -dga2016-09-09-34,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50039.mrc,1.5 -dga2016-09-09-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50040.mrc,1.5 -dga2016-09-09-36,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50041.mrc,1.5 -dga2016-09-09-37,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50042.mrc,1.5 -dga2016-09-09-38,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50043.mrc,1.5 -dga2016-09-09-39,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50044.mrc,1.5 -dga2016-09-09-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50045.mrc,1.5 -dga2016-09-09-41,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50046.mrc,1.5 -dga2016-09-09-42,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50047.mrc,1.5 -dga2016-09-09-43,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50048.mrc,1.5 -dga2016-09-09-44,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50049.mrc,1.5 -dga2016-09-09-45,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50050.mrc,1.5 -dga2016-09-09-46,['RAPTOR'],IMOD,Weighted back projection,IMOD,RAPTOR;RAPTOR,rawdata/Coxiella_Wt_D50051.mrc,1.5 -dga2016-09-09-47,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0002.mrc,1.5 -dga2016-09-09-48,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0003.mrc,1.5 -dga2016-09-09-49,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0004.mrc,1.5 -dga2016-09-09-50,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0005.mrc,1.5 -dga2016-09-09-51,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0006.mrc,1.5 -dga2016-09-09-52,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0007.mrc,1.5 -dga2016-09-09-53,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0008.mrc,1.5 -dga2016-09-09-54,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0009.mrc,1.5 -dga2016-09-09-55,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0010.mrc,1.5 -dga2016-09-09-56,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0011.mrc,1.5 -dga2016-09-09-57,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0012.mrc,1.5 -dga2016-09-09-58,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0013.mrc,1.5 -dga2016-09-09-59,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0014.mrc,1.5 -dga2016-09-09-60,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0015.mrc,1.5 -dga2016-09-09-61,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0016.mrc,1.5 -dga2016-09-09-62,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0017.mrc,1.5 -dga2016-09-09-63,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0019.mrc,1.5 -dga2016-09-09-64,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0020.mrc,1.5 -dga2016-09-09-65,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0021.mrc,1.5 -dga2016-09-09-66,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0022.mrc,1.5 -dga2016-09-09-67,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0023.mrc,1.5 -dga2016-09-09-68,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0024.mrc,1.5 -dga2016-09-09-69,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0025.mrc,1.5 -dga2016-09-09-70,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0026.mrc,1.5 -dga2016-09-09-71,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0027.mrc,1.5 -dga2016-09-09-72,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0028.mrc,1.5 -dga2016-09-09-73,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0029.mrc,1.5 -dga2016-09-09-74,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0030.mrc,1.5 -dga2016-09-09-75,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0031.mrc,1.5 -dga2016-09-09-76,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0032.mrc,1.5 -dga2016-09-09-77,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0033.mrc,1.5 -dga2016-09-09-78,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0034.mrc,1.5 -dga2016-09-09-79,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0035.mrc,1.5 -dga2016-09-09-80,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D,rawdata/Coxiella_Wt_D5a0036.mrc,1.5 -dga2016-09-09-81,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0037.mrc,1.5 -dga2016-09-09-82,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0038.mrc,1.5 -dga2016-09-09-83,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0039.mrc,1.5 -dga2016-09-09-84,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0040.mrc,1.5 -dga2016-09-09-85,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D5a0041.mrc,1.5 -dga2016-09-09-86,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D5a0042.mrc,1.5 +run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_step +dga2016-09-08-1,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50001.mrc,1.0 +dga2016-09-08-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50002.mrc,1.0 +dga2016-09-08-3,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50003.mrc,1.0 +dga2016-09-08-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50004.mrc,1.0 +dga2016-09-08-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50005.mrc,1.0 +dga2016-09-09-1,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50006.mrc,1.5 +dga2016-09-09-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50007.mrc,1.5 +dga2016-09-09-3,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50008.mrc,1.5 +dga2016-09-09-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50009.mrc,1.5 +dga2016-09-09-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50010.mrc,1.5 +dga2016-09-09-6,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50011.mrc,1.5 +dga2016-09-09-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50012.mrc,1.5 +dga2016-09-09-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50013.mrc,1.5 +dga2016-09-09-9,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/Coxiella_Wt_D50014.mrc,1.5 +dga2016-09-09-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50015.mrc,1.5 +dga2016-09-09-11,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50016.mrc,1.5 +dga2016-09-09-12,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50017.mrc,1.5 +dga2016-09-09-13,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50018.mrc,1.5 +dga2016-09-09-14,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50019.mrc,1.5 +dga2016-09-09-15,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50020.mrc,1.5 +dga2016-09-09-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50021.mrc,1.5 +dga2016-09-09-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50022.mrc,1.5 +dga2016-09-09-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50023.mrc,1.5 +dga2016-09-09-19,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50024.mrc,1.5 +dga2016-09-09-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50025.mrc,1.5 +dga2016-09-09-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50026.mrc,1.5 +dga2016-09-09-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50027.mrc,1.5 +dga2016-09-09-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50028.mrc,1.5 +dga2016-09-09-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50029.mrc,1.5 +dga2016-09-09-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50030.mrc,1.5 +dga2016-09-09-26,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50031.mrc,1.5 +dga2016-09-09-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50032.mrc,1.5 +dga2016-09-09-28,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50033.mrc,1.5 +dga2016-09-09-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50034.mrc,1.5 +dga2016-09-09-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50035.mrc,1.5 +dga2016-09-09-31,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50036.mrc,1.5 +dga2016-09-09-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50037.mrc,1.5 +dga2016-09-09-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50038.mrc,1.5 +dga2016-09-09-34,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50039.mrc,1.5 +dga2016-09-09-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50040.mrc,1.5 +dga2016-09-09-36,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,TOMO3D;RAPTOR,rawdata/Coxiella_Wt_D50041.mrc,1.5 +dga2016-09-09-37,['TOMO3D'],tomo3D,SIRT,TOMO3D,16.145,RAPTOR;TOMO3D,rawdata/Coxiella_Wt_D50042.mrc,1.5 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projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20026.mrc +dga2016-11-04-52,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20023.mrc +dga2016-11-04-53,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20024.mrc +dga2016-11-04-55,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20026.mrc dga2016-11-04-57,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20028.mrc dga2016-11-04-59,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20030.mrc -dga2016-11-04-61,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20032.mrc -dga2016-11-04-65,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20036.mrc +dga2016-11-04-61,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20032.mrc +dga2016-11-04-65,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20036.mrc dga2016-11-04-66,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20037.mrc -dga2016-11-04-68,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20039.mrc +dga2016-11-04-68,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20039.mrc dga2016-11-04-69,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20040.mrc dga2016-11-04-70,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20041.mrc dga2016-11-04-72,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/15D_Pos4_atlas20043.mrc dga2016-11-04-73,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20044.mrc -dga2016-11-04-74,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20045.mrc +dga2016-11-04-74,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20045.mrc dga2016-11-04-75,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20046.mrc -dga2016-11-04-76,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20047.mrc +dga2016-11-04-76,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20047.mrc dga2016-11-04-77,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20048.mrc -dga2016-11-04-78,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20049.mrc +dga2016-11-04-78,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20049.mrc dga2016-11-04-81,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20052.mrc -dga2016-11-04-82,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20053.mrc +dga2016-11-04-82,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20053.mrc dga2016-11-04-83,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20054.mrc dga2016-11-04-84,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20055.mrc dga2016-11-04-86,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20057.mrc -dga2016-11-04-87,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20058.mrc -dga2016-11-04-89,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20060.mrc +dga2016-11-04-87,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20058.mrc +dga2016-11-04-89,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20060.mrc dga2016-11-04-90,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20061.mrc -dga2016-11-04-93,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20064.mrc +dga2016-11-04-93,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20064.mrc dga2016-11-04-94,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/15D_Pos4_atlas20065.mrc dga2016-11-04-96,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20067.mrc dga2016-11-04-97,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20068.mrc -dga2016-11-04-99,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20070.mrc -dga2016-11-04-101,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20072.mrc +dga2016-11-04-99,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20070.mrc +dga2016-11-04-101,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/15D_Pos4_atlas20072.mrc dga2016-11-04-102,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20073.mrc dga2016-11-04-103,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20074.mrc dga2016-11-04-104,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/15D_Pos4_atlas20075.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10061.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10061.csv index e1f6d2017..d64b30185 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10061.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10061.csv @@ -1,16 +1,16 @@ run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_series_quality -dga2017-08-16-3,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0002.mrc,4 +dga2017-08-16-3,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0002.mrc,4 dga2017-08-16-4,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0003.mrc,4 dga2017-08-16-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0004.mrc,4 dga2017-08-16-6,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0005.mrc,4 dga2017-08-16-7,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0006.mrc,4 dga2017-08-16-8,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0007.mrc,4 -dga2017-08-16-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0008.mrc,4 +dga2017-08-16-9,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0008.mrc,4 dga2017-08-16-10,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0009.mrc,4 -dga2017-08-16-11,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0010.mrc,4 +dga2017-08-16-11,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0010.mrc,4 dga2017-08-16-12,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0011.mrc,4 dga2017-08-16-13,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0012.mrc,4 -dga2017-08-16-14,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0013.mrc,4 +dga2017-08-16-14,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0013.mrc,4 dga2017-08-16-15,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0014.mrc,4 dga2017-08-16-16,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0015.mrc,4 dga2017-08-16-18,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0017.mrc,4 @@ -25,58 +25,58 @@ dga2017-08-16-29,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR dga2017-08-16-30,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0029.mrc,4 dga2017-08-16-31,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0030.mrc,4 dga2017-08-16-33,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0032.mrc,4 -dga2017-08-16-34,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0033.mrc,4 -dga2017-08-16-35,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0034.mrc,4 +dga2017-08-16-34,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0033.mrc,4 +dga2017-08-16-35,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0034.mrc,4 dga2017-08-16-36,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0035.mrc,4 -dga2017-08-16-37,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0036.mrc,4 -dga2017-08-16-38,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0037.mrc,4 +dga2017-08-16-37,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0036.mrc,4 +dga2017-08-16-38,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0037.mrc,4 dga2017-08-16-39,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0038.mrc,4 dga2017-08-16-40,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0039.mrc,4 -dga2017-08-16-41,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0040.mrc,4 +dga2017-08-16-41,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0040.mrc,4 dga2017-08-16-42,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0041.mrc,4 -dga2017-08-16-43,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0042.mrc,4 +dga2017-08-16-43,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0042.mrc,4 dga2017-08-16-44,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0043.mrc,4 dga2017-08-16-45,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0044.mrc,4 dga2017-08-16-46,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0045.mrc,4 dga2017-08-16-47,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0046.mrc,4 dga2017-08-16-48,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0047.mrc,4 -dga2017-08-16-49,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0048.mrc,4 -dga2017-08-16-50,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0049.mrc,4 -dga2017-08-16-51,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0050.mrc,4 +dga2017-08-16-49,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0048.mrc,4 +dga2017-08-16-50,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0049.mrc,4 +dga2017-08-16-51,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0050.mrc,4 dga2017-08-16-52,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0051.mrc,4 -dga2017-08-16-53,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0052.mrc,4 +dga2017-08-16-53,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0052.mrc,4 dga2017-08-16-54,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0053.mrc,4 dga2017-08-16-55,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0054.mrc,4 dga2017-08-16-56,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0055.mrc,4 dga2017-08-16-57,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0056.mrc,4 dga2017-08-16-58,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0057.mrc,4 dga2017-08-16-59,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0058.mrc,4 -dga2017-08-16-60,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0059.mrc,4 -dga2017-08-16-61,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0060.mrc,4 +dga2017-08-16-60,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0059.mrc,4 +dga2017-08-16-61,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0060.mrc,4 dga2017-08-16-63,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0062.mrc,4 -dga2017-08-16-64,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0063.mrc,4 -dga2017-08-16-65,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0064.mrc,4 -dga2017-08-16-66,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0065.mrc,4 +dga2017-08-16-64,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0063.mrc,4 +dga2017-08-16-65,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0064.mrc,4 +dga2017-08-16-66,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0065.mrc,4 dga2017-08-16-67,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0066.mrc,4 dga2017-08-16-68,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0067.mrc,4 dga2017-08-16-69,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0068.mrc,4 -dga2017-08-16-70,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0069.mrc,4 +dga2017-08-16-70,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0069.mrc,4 dga2017-08-16-71,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0070.mrc,4 -dga2017-08-16-72,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0071.mrc,4 +dga2017-08-16-72,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0071.mrc,4 dga2017-08-16-73,,NON_FIDUCIAL,None,None,,,rawdata/20170814_JV1180a0072.mrc,1 dga2017-08-16-74,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0073.mrc,4 -dga2017-08-16-75,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0074.mrc,4 +dga2017-08-16-75,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0074.mrc,4 dga2017-08-16-76,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0075.mrc,4 dga2017-08-16-77,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170814_JV1180a0076.mrc,4 dga2017-08-16-78,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0077.mrc,4 dga2017-08-16-79,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0078.mrc,4 dga2017-08-16-80,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0079.mrc,4 dga2017-08-16-81,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0080.mrc,4 -dga2017-08-16-82,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0081.mrc,4 +dga2017-08-16-82,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0081.mrc,4 dga2017-08-16-83,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0082.mrc,4 dga2017-08-16-84,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0083.mrc,4 dga2017-08-16-85,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170814_JV1180a0084.mrc,4 -dga2017-08-16-87,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0086.mrc,4 +dga2017-08-16-87,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170814_JV1180a0086.mrc,4 dga2017-08-16-92,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170815_JV11800001.mrc,4 dga2017-08-16-93,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/20170815_JV11800002.mrc,4 dga2017-08-16-94,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800003.mrc,4 @@ -86,10 +86,10 @@ dga2017-08-16-97,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTO dga2017-08-16-98,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800007.mrc,4 dga2017-08-16-99,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800008.mrc,4 dga2017-08-16-100,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800009.mrc,4 -dga2017-08-16-101,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170815_JV11800010.mrc,4 +dga2017-08-16-101,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170815_JV11800010.mrc,4 dga2017-08-16-102,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800011.mrc,4 dga2017-08-16-103,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800012.mrc,4 -dga2017-08-16-105,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/20170815_JV11800014.mrc,4 +dga2017-08-16-105,['TOMO3D'],FIDUCIAL,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/20170815_JV11800014.mrc,4 dga2017-08-16-106,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800015.mrc,4 dga2017-08-16-107,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800016.mrc,4 dga2017-08-16-109,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/20170815_JV11800018.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10062.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10062.csv index 90ac1b5d5..893b212ae 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10062.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10062.csv @@ -3,77 +3,77 @@ dga2017-02-01-1,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D dga2017-02-01-2,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170002.mrc,4,1.5 dga2017-02-01-3,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170003.mrc,4,1.5 dga2017-02-01-4,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170004.mrc,4,1.5 -dga2017-02-01-5,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170005.mrc,4,1.5 +dga2017-02-01-5,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170005.mrc,4,1.5 dga2017-02-01-6,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170006.mrc,4,1.5 -dga2017-02-01-7,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170007.mrc,4,1.5 -dga2017-02-01-8,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170008.mrc,4,1.5 -dga2017-02-01-9,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170009.mrc,4,1.5 -dga2017-02-01-10,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170010.mrc,4,1.5 +dga2017-02-01-7,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170007.mrc,4,1.5 +dga2017-02-01-8,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170008.mrc,4,1.5 +dga2017-02-01-9,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170009.mrc,4,1.5 +dga2017-02-01-10,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170010.mrc,4,1.5 dga2017-02-01-11,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170011.mrc,4,1.5 dga2017-02-01-12,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170012.mrc,4,1.5 dga2017-02-01-13,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170013.mrc,4,1.5 -dga2017-02-01-14,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170015.mrc,4,1.5 -dga2017-02-01-15,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170016.mrc,4,1.5 +dga2017-02-01-14,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170015.mrc,4,1.5 +dga2017-02-01-15,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170016.mrc,4,1.5 dga2017-02-01-16,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170017.mrc,4,1.5 dga2017-02-01-17,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170018.mrc,4,1.5 dga2017-02-01-18,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170019.mrc,4,1.5 dga2017-02-01-19,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170020.mrc,4,1.5 dga2017-02-01-20,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170021.mrc,4,1.5 -dga2017-02-01-21,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170022.mrc,4,1.5 +dga2017-02-01-21,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170022.mrc,4,1.5 dga2017-02-01-22,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170023.mrc,4,1.5 -dga2017-02-01-23,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170024.mrc,4,1.5 -dga2017-02-01-24,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170025.mrc,4,1.5 +dga2017-02-01-23,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170024.mrc,4,1.5 +dga2017-02-01-24,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170025.mrc,4,1.5 dga2017-02-01-25,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170026.mrc,4,1.5 dga2017-02-01-26,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170027.mrc,4,1.5 dga2017-02-01-27,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170028.mrc,4,1.5 dga2017-02-01-28,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170029.mrc,4,1.5 -dga2017-02-01-29,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170030.mrc,4,1.5 +dga2017-02-01-29,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170030.mrc,4,1.5 dga2017-02-01-30,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170031.mrc,4,1.5 -dga2017-02-01-31,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170032.mrc,4,1.5 -dga2017-02-01-32,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170033.mrc,4,1.5 +dga2017-02-01-31,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170032.mrc,4,1.5 +dga2017-02-01-32,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170033.mrc,4,1.5 dga2017-02-01-34,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170035.mrc,4,1.5 dga2017-02-01-35,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170036.mrc,4,1.5 -dga2017-02-01-36,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170037.mrc,4,1.5 -dga2017-02-01-37,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170038.mrc,4,1.5 -dga2017-02-01-38,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170039.mrc,4,1.5 -dga2017-02-01-39,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_010220170040.mrc,4,1.5 +dga2017-02-01-36,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170037.mrc,4,1.5 +dga2017-02-01-37,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170038.mrc,4,1.5 +dga2017-02-01-38,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170039.mrc,4,1.5 +dga2017-02-01-39,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_010220170040.mrc,4,1.5 dga2017-02-01-40,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_010220170041.mrc,4,1.5 dga2017-02-01-41,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_010220170042.mrc,4,1.5 dga2017-02-02-7,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0001.mrc,4,2.0 -dga2017-02-02-8,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0002.mrc,4,2.0 +dga2017-02-02-8,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0002.mrc,4,2.0 dga2017-02-02-9,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0003.mrc,4,2.0 dga2017-02-02-10,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0004.mrc,4,2.0 -dga2017-02-02-11,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0005.mrc,4,2.0 +dga2017-02-02-11,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0005.mrc,4,2.0 dga2017-02-02-12,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0006.mrc,4,2.0 -dga2017-02-02-13,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0007.mrc,4,2.0 +dga2017-02-02-13,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0007.mrc,4,2.0 dga2017-02-02-14,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0008.mrc,4,2.0 -dga2017-02-02-15,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0009.mrc,4,2.0 +dga2017-02-02-15,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0009.mrc,4,2.0 dga2017-02-02-16,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0010.mrc,4,2.0 -dga2017-02-02-17,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0011.mrc,4,2.0 -dga2017-02-02-18,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0012.mrc,4,2.0 +dga2017-02-02-17,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0011.mrc,4,2.0 +dga2017-02-02-18,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0012.mrc,4,2.0 dga2017-02-02-19,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0013.mrc,4,2.0 dga2017-02-02-20,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0014.mrc,4,2.0 dga2017-02-02-21,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0015.mrc,4,2.0 dga2017-02-02-22,,NON_FIDUCIAL,,None,None,,,rawdata/JV1181_02022017a0016.mrc,1,2.0 -dga2017-02-02-23,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0017.mrc,4,2.0 +dga2017-02-02-23,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0017.mrc,4,2.0 dga2017-02-02-24,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0018.mrc,4,2.0 dga2017-02-02-25,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0019.mrc,4,2.0 -dga2017-02-02-26,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0020.mrc,4,2.0 +dga2017-02-02-26,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0020.mrc,4,2.0 dga2017-02-02-27,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0021.mrc,4,2.0 dga2017-02-02-28,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0022.mrc,4,2.0 dga2017-02-02-29,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0023.mrc,4,2.0 dga2017-02-02-30,,NON_FIDUCIAL,,None,None,,,rawdata/JV1181_02022017a0024.mrc,1,2.0 -dga2017-02-02-31,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0025.mrc,4,2.0 +dga2017-02-02-31,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0025.mrc,4,2.0 dga2017-02-02-32,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0026.mrc,4,2.0 dga2017-02-02-33,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0027.mrc,4,2.0 -dga2017-02-02-34,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0028.mrc,4,2.0 -dga2017-02-02-35,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0029.mrc,4,2.0 -dga2017-02-02-36,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0030.mrc,4,2.0 -dga2017-02-02-37,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0031.mrc,4,2.0 -dga2017-02-02-38,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0032.mrc,4,2.0 +dga2017-02-02-34,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0028.mrc,4,2.0 +dga2017-02-02-35,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0029.mrc,4,2.0 +dga2017-02-02-36,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0030.mrc,4,2.0 +dga2017-02-02-37,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0031.mrc,4,2.0 +dga2017-02-02-38,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0032.mrc,4,2.0 dga2017-02-02-39,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0033.mrc,4,2.0 dga2017-02-02-40,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0034.mrc,4,2.0 -dga2017-02-02-41,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0035.mrc,4,2.0 +dga2017-02-02-41,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0035.mrc,4,2.0 dga2017-02-02-42,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0036.mrc,4,2.0 dga2017-02-02-43,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0037.mrc,4,2.0 dga2017-02-02-44,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0038.mrc,4,2.0 @@ -81,15 +81,15 @@ dga2017-02-02-45,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3 dga2017-02-02-46,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0040.mrc,4,2.0 dga2017-02-02-47,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0041.mrc,4,2.0 dga2017-02-02-48,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0042.mrc,4,2.0 -dga2017-02-02-49,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0043.mrc,4,2.0 +dga2017-02-02-49,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0043.mrc,4,2.0 dga2017-02-02-51,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0045.mrc,4,2.0 -dga2017-02-02-52,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0046.mrc,4,2.0 +dga2017-02-02-52,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0046.mrc,4,2.0 dga2017-02-02-53,,NON_FIDUCIAL,,None,None,,,rawdata/JV1181_02022017a0047.mrc,1,2.0 dga2017-02-02-54,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0048.mrc,4,2.0 -dga2017-02-02-55,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0049.mrc,4,2.0 +dga2017-02-02-55,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0049.mrc,4,2.0 dga2017-02-02-56,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0050.mrc,4,2.0 -dga2017-02-02-57,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0051.mrc,4,2.0 +dga2017-02-02-57,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0051.mrc,4,2.0 dga2017-02-02-58,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV1181_02022017a0052.mrc,4,2.0 -dga2017-02-02-59,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0053.mrc,4,2.0 +dga2017-02-02-59,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV1181_02022017a0053.mrc,4,2.0 dga2017-02-02-60,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0054.mrc,4,2.0 dga2017-02-02-61,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV1181_02022017a0055.mrc,4,2.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10063.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10063.csv index f2fef4abb..4c2d6b569 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10063.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10063.csv @@ -42,7 +42,7 @@ dga2016-06-14-40,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR dga2016-06-14-41,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0011.mrc,4 dga2016-06-14-42,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0012.mrc,4 dga2016-06-14-43,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0013.mrc,4 -dga2016-06-14-44,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.600000000000001,RAPTOR;RAPTOR,rawdata/DG_1644_150620163rd0014.mrc,4 +dga2016-06-14-44,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR;RAPTOR,rawdata/DG_1644_150620163rd0014.mrc,4 dga2016-06-14-45,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0015.mrc,4 dga2016-06-14-46,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0016.mrc,4 dga2016-06-14-47,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/DG_1644_150620163rd0017.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10064.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10064.csv index 0aa200c14..35d9c6f79 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10064.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10064.csv @@ -5,68 +5,68 @@ dga2017-02-08-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,r dga2017-02-08-6,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0004.mrc dga2017-02-08-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0005.mrc dga2017-02-08-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0006.mrc -dga2017-02-08-9,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0007.mrc -dga2017-02-08-10,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0008.mrc +dga2017-02-08-9,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0007.mrc +dga2017-02-08-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0008.mrc dga2017-02-08-11,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0009.mrc dga2017-02-08-12,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0010.mrc dga2017-02-08-13,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0011.mrc dga2017-02-08-14,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0012.mrc -dga2017-02-08-15,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0013.mrc -dga2017-02-08-16,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0014.mrc +dga2017-02-08-15,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0013.mrc +dga2017-02-08-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0014.mrc dga2017-02-08-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0015.mrc -dga2017-02-08-18,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0016.mrc -dga2017-02-08-19,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0017.mrc +dga2017-02-08-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0016.mrc +dga2017-02-08-19,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0017.mrc dga2017-02-08-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0018.mrc dga2017-02-08-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0019.mrc dga2017-02-08-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0020.mrc -dga2017-02-08-23,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0021.mrc +dga2017-02-08-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0021.mrc dga2017-02-08-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0022.mrc -dga2017-02-08-25,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0023.mrc -dga2017-02-08-27,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0025.mrc +dga2017-02-08-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0023.mrc +dga2017-02-08-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0025.mrc dga2017-02-08-28,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0026.mrc -dga2017-02-08-29,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0027.mrc +dga2017-02-08-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0027.mrc dga2017-02-08-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0028.mrc -dga2017-02-08-31,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0029.mrc -dga2017-02-08-32,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0030.mrc -dga2017-02-08-33,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0031.mrc -dga2017-02-08-34,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0032.mrc -dga2017-02-08-35,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0033.mrc +dga2017-02-08-31,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0029.mrc +dga2017-02-08-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0030.mrc +dga2017-02-08-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0031.mrc +dga2017-02-08-34,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0032.mrc +dga2017-02-08-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0033.mrc dga2017-02-08-36,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0034.mrc dga2017-02-08-37,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0035.mrc dga2017-02-08-38,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0036.mrc -dga2017-02-08-39,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0037.mrc -dga2017-02-08-40,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0038.mrc -dga2017-02-08-41,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0039.mrc -dga2017-02-08-42,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0040.mrc +dga2017-02-08-39,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0037.mrc +dga2017-02-08-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0038.mrc +dga2017-02-08-41,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0039.mrc +dga2017-02-08-42,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0040.mrc dga2017-02-08-43,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0041.mrc dga2017-02-08-44,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0042.mrc dga2017-02-08-45,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208a0043.mrc -dga2017-02-08-46,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0044.mrc +dga2017-02-08-46,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0044.mrc dga2017-02-08-47,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0045.mrc dga2017-02-08-48,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208a0046.mrc dga2017-02-08-49,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0047.mrc -dga2017-02-08-51,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0049.mrc +dga2017-02-08-51,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0049.mrc dga2017-02-08-53,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0051.mrc -dga2017-02-08-54,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0052.mrc +dga2017-02-08-54,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0052.mrc dga2017-02-08-55,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0053.mrc dga2017-02-08-56,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0054.mrc -dga2017-02-08-57,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0055.mrc +dga2017-02-08-57,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0055.mrc dga2017-02-08-59,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0057.mrc dga2017-02-08-60,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0058.mrc -dga2017-02-08-61,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0059.mrc -dga2017-02-08-62,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0060.mrc -dga2017-02-08-63,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0061.mrc +dga2017-02-08-61,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0059.mrc +dga2017-02-08-62,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0060.mrc +dga2017-02-08-63,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0061.mrc dga2017-02-08-64,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208a0062.mrc -dga2017-02-08-66,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0064.mrc -dga2017-02-08-67,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0065.mrc +dga2017-02-08-66,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0064.mrc +dga2017-02-08-67,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0065.mrc dga2017-02-08-68,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208a0066.mrc -dga2017-02-08-69,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0067.mrc -dga2017-02-08-70,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0068.mrc -dga2017-02-08-71,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0069.mrc -dga2017-02-08-72,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0070.mrc -dga2017-02-08-89,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0001.mrc -dga2017-02-08-90,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0002.mrc -dga2017-02-08-91,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0003.mrc +dga2017-02-08-69,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0067.mrc +dga2017-02-08-70,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0068.mrc +dga2017-02-08-71,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0069.mrc +dga2017-02-08-72,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208a0070.mrc +dga2017-02-08-89,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0001.mrc +dga2017-02-08-90,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0002.mrc +dga2017-02-08-91,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208m0003.mrc dga2017-02-08-93,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208m0005.mrc dga2017-02-08-94,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208m0006.mrc dga2017-02-08-95,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208m0007.mrc @@ -74,12 +74,12 @@ dga2017-02-08-96,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata dga2017-02-08-99,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208m0011.mrc dga2017-02-08-101,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208p0001.mrc dga2017-02-08-102,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208p0002.mrc -dga2017-02-08-103,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0003.mrc +dga2017-02-08-103,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0003.mrc dga2017-02-08-104,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208p0004.mrc -dga2017-02-08-105,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0005.mrc -dga2017-02-08-106,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0006.mrc +dga2017-02-08-105,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0005.mrc +dga2017-02-08-106,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208p0006.mrc dga2017-02-08-107,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV2067_20170208p0007.mrc dga2017-02-08-109,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208q0001.mrc dga2017-02-08-110,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV2067_20170208q0002.mrc -dga2017-02-08-111,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208q0003.mrc -dga2017-02-08-112,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV2067_20170208q0004.mrc +dga2017-02-08-111,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208q0003.mrc +dga2017-02-08-112,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV2067_20170208q0004.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10065.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10065.csv index 596429587..260251039 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10065.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10065.csv @@ -1,36 +1,36 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,ts-tilt_alignment_software,ts-tilt_series_path dga2016-01-13-1,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area100010001.mrc dga2016-01-13-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area100010001.mrc -dga2016-01-13-2,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area100010002.mrc -dga2016-01-13-35,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area100010002.mrc -dga2016-01-13-3,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area100010003.mrc -dga2016-01-13-33,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area100010003.mrc +dga2016-01-13-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area100010002.mrc +dga2016-01-13-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area100010002.mrc +dga2016-01-13-3,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area100010003.mrc +dga2016-01-13-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area100010003.mrc dga2016-01-13-4,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area100010004.mrc dga2016-01-13-34,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area100010004.mrc -dga2016-01-13-5,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area100010005.mrc -dga2016-01-13-6,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area2000100010001.mrc -dga2016-01-13-7,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area2000100010002.mrc -dga2016-01-13-8,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area2000100010003.mrc +dga2016-01-13-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area100010005.mrc +dga2016-01-13-6,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area2000100010001.mrc +dga2016-01-13-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area2000100010002.mrc +dga2016-01-13-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area2000100010003.mrc dga2016-01-13-9,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area2000100010004.mrc -dga2016-01-13-10,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area3000100010001.mrc -dga2016-01-13-11,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area3000100010002.mrc -dga2016-01-13-12,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area3000100010003.mrc +dga2016-01-13-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area3000100010001.mrc +dga2016-01-13-11,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area3000100010002.mrc +dga2016-01-13-12,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area3000100010003.mrc dga2016-01-13-13,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area5000100010001.mrc dga2016-01-13-14,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area5000100010002.mrc dga2016-01-13-15,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area5000100010003.mrc dga2016-01-13-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area5000100010004.mrc dga2016-01-13-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area5000100010005.mrc dga2016-01-13-19,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area1000800010002.mrc -dga2016-01-13-20,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1000800010003.mrc +dga2016-01-13-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1000800010003.mrc dga2016-01-13-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area1000800010004.mrc -dga2016-01-13-22,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area600010010001.mrc +dga2016-01-13-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area600010010001.mrc dga2016-01-13-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area1500100010001.mrc dga2016-01-13-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area1500100010002.mrc -dga2016-01-13-25,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010003.mrc -dga2016-01-13-26,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010004.mrc -dga2016-01-13-27,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010005.mrc -dga2016-01-13-28,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010006.mrc -dga2016-01-13-29,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010007.mrc -dga2016-01-13-30,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1500100010008.mrc +dga2016-01-13-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010003.mrc +dga2016-01-13-26,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010004.mrc +dga2016-01-13-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010005.mrc +dga2016-01-13-28,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010006.mrc +dga2016-01-13-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010007.mrc +dga2016-01-13-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1500100010008.mrc dga2016-01-13-31,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1500100010009.mrc dga2016-01-13-37,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area100010005.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10066.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10066.csv index e1b6fc76c..ff6d3486e 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10066.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10066.csv @@ -2,7 +2,7 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_metho dga2017-01-08-1,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10042.mrc dga2017-01-08-2,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10001.mrc dga2017-01-08-3,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10043.mrc -dga2017-01-08-4,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10002.mrc +dga2017-01-08-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10002.mrc dga2017-01-08-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10044.mrc dga2017-01-08-6,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10003.mrc dga2017-01-08-7,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10045.mrc @@ -16,30 +16,30 @@ dga2017-01-08-14,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559 dga2017-01-08-15,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10049.mrc dga2017-01-08-16,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10008.mrc dga2017-01-08-17,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10054.mrc -dga2017-01-08-18,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10009.mrc -dga2017-01-08-20,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10010.mrc +dga2017-01-08-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10009.mrc +dga2017-01-08-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10010.mrc dga2017-01-08-21,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10056.mrc -dga2017-01-08-22,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10011.mrc +dga2017-01-08-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10011.mrc dga2017-01-08-25,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10013.mrc dga2017-01-08-26,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10014.mrc -dga2017-01-08-27,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10015.mrc +dga2017-01-08-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10015.mrc dga2017-01-08-28,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10058.mrc dga2017-01-08-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10016.mrc dga2017-01-08-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10017.mrc dga2017-01-08-31,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10059.mrc dga2017-01-08-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10018.mrc -dga2017-01-08-33,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10060.mrc +dga2017-01-08-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10060.mrc dga2017-01-08-34,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10019.mrc dga2017-01-08-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10061.mrc dga2017-01-08-36,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10020.mrc dga2017-01-08-37,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10021.mrc dga2017-01-08-38,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10022.mrc dga2017-01-08-39,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10062.mrc -dga2017-01-08-40,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10023.mrc +dga2017-01-08-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10023.mrc dga2017-01-08-41,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10024.mrc dga2017-01-08-42,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10063.mrc dga2017-01-08-43,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10025.mrc -dga2017-01-08-44,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10026.mrc +dga2017-01-08-44,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10026.mrc dga2017-01-08-45,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10064.mrc dga2017-01-08-46,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10027.mrc dga2017-01-08-47,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10065.mrc @@ -51,10 +51,10 @@ dga2017-01-08-52,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_2017 dga2017-01-08-53,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10067.mrc dga2017-01-08-54,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10032.mrc dga2017-01-08-56,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10033.mrc -dga2017-01-08-57,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10034.mrc +dga2017-01-08-57,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10034.mrc dga2017-01-08-58,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10035.mrc -dga2017-01-08-59,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10069.mrc -dga2017-01-08-61,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10070.mrc +dga2017-01-08-59,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10069.mrc +dga2017-01-08-61,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10070.mrc dga2017-01-08-62,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10037.mrc dga2017-01-08-63,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10071.mrc dga2017-01-08-64,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10038.mrc @@ -62,37 +62,37 @@ dga2017-01-08-65,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559 dga2017-01-08-66,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10039.mrc dga2017-01-08-67,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0001.mrc dga2017-01-08-68,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10040.mrc -dga2017-01-08-69,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0002.mrc +dga2017-01-08-69,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0002.mrc dga2017-01-08-70,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10041.mrc -dga2017-01-08-71,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10053.mrc -dga2017-01-08-72,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0003.mrc +dga2017-01-08-71,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10053.mrc +dga2017-01-08-72,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0003.mrc dga2017-01-08-73,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170106_area10050.mrc dga2017-01-08-74,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0004.mrc dga2017-01-08-75,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170106_area10051.mrc dga2017-01-08-76,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170108_area12nd0005.mrc -dga2017-01-08-77,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10052.mrc +dga2017-01-08-77,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170106_area10052.mrc dga2017-01-08-78,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0006.mrc dga2017-01-08-79,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170108_area12nd0007.mrc dga2017-01-08-80,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0008.mrc dga2017-01-08-81,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0009.mrc dga2017-01-08-83,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0011.mrc dga2017-01-08-84,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0012.mrc -dga2017-01-08-85,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0013.mrc +dga2017-01-08-85,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0013.mrc dga2017-01-08-86,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0014.mrc dga2017-01-08-87,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0015.mrc -dga2017-01-08-88,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0016.mrc +dga2017-01-08-88,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0016.mrc dga2017-01-08-89,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0017.mrc dga2017-01-08-90,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0018.mrc -dga2017-01-08-91,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0019.mrc +dga2017-01-08-91,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0019.mrc dga2017-01-08-92,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0020.mrc -dga2017-01-08-94,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0022.mrc -dga2017-01-08-95,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0023.mrc +dga2017-01-08-94,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0022.mrc +dga2017-01-08-95,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108_area12nd0023.mrc dga2017-01-08-96,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108_area12nd0024.mrc dga2017-01-08-97,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20001.mrc dga2017-01-08-98,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20002.mrc dga2017-01-08-99,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20003.mrc dga2017-01-08-100,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/JV3559_20170108a_area20004.mrc -dga2017-01-08-101,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/JV3559_20170108a_area20005.mrc +dga2017-01-08-101,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/JV3559_20170108a_area20005.mrc dga2017-01-08-102,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20006.mrc dga2017-01-08-103,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20007.mrc dga2017-01-08-104,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/JV3559_20170108a_area20008.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10068.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10068.csv index f5d1075bc..1dc8db7b1 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10068.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10068.csv @@ -2,26 +2,26 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_metho dga2016-01-14-1,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area10001.mrc dga2016-01-14-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area10002.mrc dga2016-01-14-3,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area10003.mrc -dga2016-01-14-4,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area10004.mrc +dga2016-01-14-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area10004.mrc dga2016-01-14-5,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area10005.mrc dga2016-01-14-6,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area10006.mrc dga2016-01-14-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area10007.mrc dga2016-01-14-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area10008.mrc -dga2016-01-14-9,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area40001.mrc +dga2016-01-14-9,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area40001.mrc dga2016-01-14-10,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area40002.mrc dga2016-01-14-11,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area50001.mrc -dga2016-01-14-12,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area60001.mrc -dga2016-01-14-13,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area70001.mrc +dga2016-01-14-12,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area60001.mrc +dga2016-01-14-13,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area70001.mrc dga2016-01-14-14,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area80001.mrc dga2016-01-14-15,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area80002.mrc dga2016-01-14-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area100001.mrc -dga2016-01-14-17,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area100002.mrc +dga2016-01-14-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area100002.mrc dga2016-01-14-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area110001.mrc -dga2016-01-14-19,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area130001.mrc +dga2016-01-14-19,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area130001.mrc dga2016-01-14-20,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area140001.mrc -dga2016-01-14-21,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area140002.mrc -dga2016-01-14-22,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area160001.mrc +dga2016-01-14-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area140002.mrc +dga2016-01-14-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area160001.mrc dga2016-01-14-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area170001.mrc dga2016-01-14-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area190001.mrc dga2016-01-14-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas_area200001.mrc -dga2016-01-14-26,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area200002.mrc +dga2016-01-14-26,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area200002.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10069.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10069.csv index 1069ed82e..f285c6c8f 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10069.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10069.csv @@ -30,7 +30,7 @@ dga2016-04-02-44,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR, dga2016-04-02-45,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas10022.mrc,4 dga2016-04-02-47,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas10023.mrc,4 dga2016-04-02-48,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20018.mrc,4 -dga2016-04-02-49,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas10024.mrc,4 +dga2016-04-02-49,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas10024.mrc,4 dga2016-04-02-50,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20019.mrc,4 dga2016-04-02-51,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas10025.mrc,4 dga2016-04-02-52,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20020.mrc,4 @@ -43,7 +43,7 @@ dga2016-04-02-63,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR, dga2016-04-02-64,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20026.mrc,4 dga2016-04-02-65,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas10035.mrc,4 dga2016-04-02-66,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20027.mrc,4 -dga2016-04-02-67,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas10036.mrc,4 +dga2016-04-02-67,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas10036.mrc,4 dga2016-04-02-68,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20028.mrc,4 dga2016-04-02-69,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20029.mrc,4 dga2016-04-02-70,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20030.mrc,4 @@ -51,7 +51,7 @@ dga2016-04-02-73,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR, dga2016-04-02-74,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,TOMO3D;RAPTOR,rawdata/dg20160331_3572_atlas20034.mrc,4 dga2016-04-02-75,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20035.mrc,4 dga2016-04-02-77,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20037.mrc,4 -dga2016-04-02-78,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas20038.mrc,4 +dga2016-04-02-78,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas20038.mrc,4 dga2016-04-02-79,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20039.mrc,4 dga2016-04-02-80,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20040.mrc,4 dga2016-04-02-81,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas20041.mrc,4 @@ -73,7 +73,7 @@ dga2016-04-02-99,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR, dga2016-04-02-101,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas3b0002.mrc,4 dga2016-04-02-102,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas3b0003.mrc,4 dga2016-04-02-103,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlas3b0004.mrc,4 -dga2016-04-02-104,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas3b0006.mrc,4 +dga2016-04-02-104,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlas3b0006.mrc,4 dga2016-04-02-105,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,TOMO3D;RAPTOR,rawdata/dg20160331_3572_atlas3b0007.mrc,4 dga2016-04-02-106,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0001.mrc,4 dga2016-04-02-107,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,TOMO3D;RAPTOR,rawdata/dg20160331_3572_atlasd0002.mrc,4 @@ -91,7 +91,7 @@ dga2016-04-02-118,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR dga2016-04-02-119,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0014.mrc,4 dga2016-04-02-120,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0015.mrc,4 dga2016-04-02-121,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0016.mrc,4 -dga2016-04-02-122,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlasd0017.mrc,4 +dga2016-04-02-122,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,RAPTOR;TOMO3D,rawdata/dg20160331_3572_atlasd0017.mrc,4 dga2016-04-02-123,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0018.mrc,4 dga2016-04-02-124,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,TOMO3D;RAPTOR,rawdata/dg20160331_3572_atlasd0019.mrc,4 dga2016-04-02-125,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,RAPTOR,rawdata/dg20160331_3572_atlasd0020.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10070.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10070.csv index d3d634717..ff2ac8b82 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10070.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10070.csv @@ -1,11 +1,11 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_step,ts-total_flux -dga2017-01-15-86,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/jv3579_area5a0002.mrc,1.5,100.0 -dga2017-01-15-88,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/jv3579_area5a0004.mrc,1.5,100.0 +dga2017-01-15-86,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/jv3579_area5a0002.mrc,1.5,100.0 +dga2017-01-15-88,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/jv3579_area5a0004.mrc,1.5,100.0 dga2017-01-15-89,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/jv3579_area5a0005.mrc,1.5,100.0 -dga2017-01-15-90,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/jv3579_area5a0006.mrc,1.5,100.0 +dga2017-01-15-90,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/jv3579_area5a0006.mrc,1.5,100.0 dga2017-01-15-91,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/jv3579_area5a0007.mrc,1.5,100.0 dga2017-01-15-92,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/jv3579_area5a0008.mrc,1.5,100.0 -dga2017-01-15-95,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/jv3579_area5a0012.mrc,1.5,100.0 +dga2017-01-15-95,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/jv3579_area5a0012.mrc,1.5,100.0 dga2017-01-15-99,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/jv3579_area5a0016.mrc,1.5,100.0 dga2017-01-15-100,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/jv3579_area5a0017.mrc,1.5,100.0 dga2017-01-15-101,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/jv3579_area5a0018.mrc,1.5,100.0 @@ -14,43 +14,43 @@ dga2017-01-15-103,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdat dga2017-05-10-2,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510a0001.mrc,2.0,110.0 dga2017-05-10-3,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510a0002.mrc,2.0,110.0 dga2017-05-10-4,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510a0003.mrc,2.0,110.0 -dga2017-05-10-5,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0001.mrc,2.0,110.0 +dga2017-05-10-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0001.mrc,2.0,110.0 dga2017-05-10-6,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510b0002.mrc,2.0,110.0 dga2017-05-10-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510b0003.mrc,2.0,110.0 -dga2017-05-10-8,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0004.mrc,2.0,110.0 -dga2017-05-10-9,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0005.mrc,2.0,110.0 +dga2017-05-10-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0004.mrc,2.0,110.0 +dga2017-05-10-9,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510b0005.mrc,2.0,110.0 dga2017-05-10-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510b0006.mrc,2.0,110.0 dga2017-05-10-11,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510b0007.mrc,2.0,110.0 dga2017-05-10-16,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510c0011.mrc,2.0,110.0 dga2017-05-10-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0012.mrc,2.0,110.0 -dga2017-05-10-18,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0013.mrc,2.0,110.0 -dga2017-05-10-19,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0014.mrc,2.0,110.0 +dga2017-05-10-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0013.mrc,2.0,110.0 +dga2017-05-10-19,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0014.mrc,2.0,110.0 dga2017-05-10-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0015.mrc,2.0,110.0 dga2017-05-10-21,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510c0016.mrc,2.0,110.0 dga2017-05-10-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0017.mrc,2.0,110.0 dga2017-05-10-23,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510c0018.mrc,2.0,110.0 dga2017-05-10-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0019.mrc,2.0,110.0 dga2017-05-10-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0020.mrc,2.0,110.0 -dga2017-05-10-27,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0022.mrc,2.0,110.0 +dga2017-05-10-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0022.mrc,2.0,110.0 dga2017-05-10-28,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0023.mrc,2.0,110.0 -dga2017-05-10-29,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0024.mrc,2.0,110.0 -dga2017-05-10-30,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0025.mrc,2.0,110.0 +dga2017-05-10-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0024.mrc,2.0,110.0 +dga2017-05-10-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0025.mrc,2.0,110.0 dga2017-05-10-31,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0026.mrc,2.0,110.0 -dga2017-05-10-32,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0027.mrc,2.0,110.0 +dga2017-05-10-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0027.mrc,2.0,110.0 dga2017-05-10-33,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510c0028.mrc,2.0,110.0 -dga2017-05-10-34,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0030.mrc,2.0,110.0 +dga2017-05-10-34,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0030.mrc,2.0,110.0 dga2017-05-10-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0031.mrc,2.0,110.0 dga2017-05-10-36,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0032.mrc,2.0,110.0 -dga2017-05-10-37,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0033.mrc,2.0,110.0 +dga2017-05-10-37,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0033.mrc,2.0,110.0 dga2017-05-10-38,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0034.mrc,2.0,110.0 -dga2017-05-10-40,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0036.mrc,2.0,110.0 -dga2017-05-10-41,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0037.mrc,2.0,110.0 +dga2017-05-10-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0036.mrc,2.0,110.0 +dga2017-05-10-41,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170510c0037.mrc,2.0,110.0 dga2017-05-10-42,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170510c0038.mrc,2.0,110.0 dga2017-05-10-43,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170510c0039.mrc,2.0,110.0 dga2017-05-10-48,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0001.mrc,2.0,110.0 dga2017-05-10-50,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0003.mrc,2.0,110.0 -dga2017-05-10-51,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0004.mrc,2.0,110.0 -dga2017-05-10-52,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0005.mrc,2.0,110.0 +dga2017-05-10-51,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0004.mrc,2.0,110.0 +dga2017-05-10-52,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0005.mrc,2.0,110.0 dga2017-05-10-53,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0006.mrc,2.0,110.0 dga2017-05-10-54,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0007.mrc,2.0,110.0 dga2017-05-10-55,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0008.mrc,2.0,110.0 @@ -58,36 +58,36 @@ dga2017-05-10-56,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR, dga2017-05-10-57,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0010.mrc,2.0,110.0 dga2017-05-10-58,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0011.mrc,2.0,110.0 dga2017-05-10-59,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0012.mrc,2.0,110.0 -dga2017-05-10-60,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0013.mrc,2.0,110.0 +dga2017-05-10-60,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0013.mrc,2.0,110.0 dga2017-05-10-61,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0014.mrc,2.0,110.0 dga2017-05-10-62,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0015.mrc,2.0,110.0 dga2017-05-10-63,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0016.mrc,2.0,110.0 -dga2017-05-10-64,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0017.mrc,2.0,110.0 -dga2017-05-10-65,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0018.mrc,2.0,110.0 -dga2017-05-10-66,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0019.mrc,2.0,110.0 +dga2017-05-10-64,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0017.mrc,2.0,110.0 +dga2017-05-10-65,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0018.mrc,2.0,110.0 +dga2017-05-10-66,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0019.mrc,2.0,110.0 dga2017-05-10-67,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0020.mrc,2.0,110.0 dga2017-05-10-68,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0021.mrc,2.0,110.0 -dga2017-05-10-69,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0022.mrc,2.0,110.0 +dga2017-05-10-69,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0022.mrc,2.0,110.0 dga2017-05-10-70,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0023.mrc,2.0,110.0 -dga2017-05-10-71,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0024.mrc,2.0,110.0 +dga2017-05-10-71,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0024.mrc,2.0,110.0 dga2017-05-10-72,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0025.mrc,2.0,110.0 dga2017-05-10-73,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0026.mrc,2.0,110.0 -dga2017-05-10-75,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0028.mrc,2.0,110.0 +dga2017-05-10-75,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0028.mrc,2.0,110.0 dga2017-05-10-76,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR,rawdata/JV3579_20170511a0029.mrc,2.0,110.0 dga2017-05-10-77,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0030.mrc,2.0,110.0 dga2017-05-10-78,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0031.mrc,2.0,110.0 -dga2017-05-10-79,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0032.mrc,2.0,110.0 +dga2017-05-10-79,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0032.mrc,2.0,110.0 dga2017-05-10-80,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0033.mrc,2.0,110.0 dga2017-05-10-82,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0035.mrc,2.0,110.0 -dga2017-05-10-83,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0036.mrc,2.0,110.0 +dga2017-05-10-83,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0036.mrc,2.0,110.0 dga2017-05-10-84,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0037.mrc,2.0,110.0 -dga2017-05-10-85,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0038.mrc,2.0,110.0 +dga2017-05-10-85,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0038.mrc,2.0,110.0 dga2017-05-10-87,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0040.mrc,2.0,110.0 -dga2017-05-10-88,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0041.mrc,2.0,110.0 +dga2017-05-10-88,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0041.mrc,2.0,110.0 dga2017-05-10-89,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0042.mrc,2.0,110.0 -dga2017-05-10-90,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0043.mrc,2.0,110.0 +dga2017-05-10-90,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0043.mrc,2.0,110.0 dga2017-05-10-91,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0044.mrc,2.0,110.0 -dga2017-05-10-92,['RAPTOR'],,Weighted back projection,IMOD,16.145,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0045.mrc,2.0,110.0 +dga2017-05-10-92,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,RAPTOR;TOMO3D,rawdata/JV3579_20170511a0045.mrc,2.0,110.0 dga2017-05-10-93,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0046.mrc,2.0,110.0 dga2017-05-10-94,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0047.mrc,2.0,110.0 dga2017-05-10-95,['TOMO3D'],tomo3D,SIRT,TOMO3D,15.600000000000001,TOMO3D;RAPTOR,rawdata/JV3579_20170511a0048.mrc,2.0,110.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10074.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10074.csv index b2f139e15..18eb340be 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10074.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10074.csv @@ -1,10 +1,10 @@ run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_series_quality -dga2016-08-09-2,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0054.mrc,4 -dga2016-08-09-5,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0055.mrc,4 +dga2016-08-09-2,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0054.mrc,4 +dga2016-08-09-5,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0055.mrc,4 dga2016-08-09-7,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0056.mrc,4 dga2016-08-09-98,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0056.mrc,4 -dga2016-08-09-8,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0057.mrc,4 -dga2016-08-09-9,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0058.mrc,4 +dga2016-08-09-8,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0057.mrc,4 +dga2016-08-09-9,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0058.mrc,4 dga2016-08-09-11,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0060.mrc,4 dga2016-08-09-12,['RAPTOR'],FIDUCIAL,,SIRT,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0061.mrc,4 dga2016-08-09-94,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0061.mrc,4 @@ -19,7 +19,7 @@ dga2016-08-09-17,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-09-109,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0069.mrc,4 dga2016-08-09-18,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0070.mrc,4 dga2016-08-09-110,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0070.mrc,4 -dga2016-08-09-19,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0071.mrc,4 +dga2016-08-09-19,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0071.mrc,4 dga2016-08-09-20,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0072.mrc,4 dga2016-08-09-112,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0072.mrc,4 dga2016-08-09-21,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0073.mrc,4 @@ -46,13 +46,13 @@ dga2016-08-09-38,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-09-39,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0006.mrc,4 dga2016-08-09-40,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0007.mrc,4 dga2016-08-09-41,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0008.mrc,4 -dga2016-08-09-42,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0009.mrc,4 +dga2016-08-09-42,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0009.mrc,4 dga2016-08-09-43,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0010.mrc,4 dga2016-08-09-44,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0011.mrc,4 dga2016-08-09-45,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0012.mrc,4 dga2016-08-09-46,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0013.mrc,4 dga2016-08-09-47,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0014.mrc,4 -dga2016-08-09-48,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0015.mrc,4 +dga2016-08-09-48,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0015.mrc,4 dga2016-08-09-49,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0016.mrc,4 dga2016-08-09-50,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0017.mrc,4 dga2016-08-09-51,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0018.mrc,4 @@ -62,7 +62,7 @@ dga2016-08-09-54,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-09-55,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0022.mrc,4 dga2016-08-09-56,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0023.mrc,4 dga2016-08-09-57,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0024.mrc,4 -dga2016-08-09-58,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0025.mrc,4 +dga2016-08-09-58,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0025.mrc,4 dga2016-08-09-59,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0026.mrc,4 dga2016-08-09-60,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0027.mrc,4 dga2016-08-09-61,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0028.mrc,4 @@ -71,7 +71,7 @@ dga2016-08-09-64,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-09-65,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0032.mrc,4 dga2016-08-09-66,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0033.mrc,4 dga2016-08-09-67,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0034.mrc,4 -dga2016-08-09-68,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0035.mrc,4 +dga2016-08-09-68,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0035.mrc,4 dga2016-08-09-69,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV5443a0036.mrc,4 dga2016-08-09-70,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0037.mrc,4 dga2016-08-09-71,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0038.mrc,4 @@ -86,10 +86,10 @@ dga2016-08-09-79,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-09-80,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0048.mrc,4 dga2016-08-09-81,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0049.mrc,4 dga2016-08-09-82,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0050.mrc,4 -dga2016-08-09-83,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0051.mrc,4 +dga2016-08-09-83,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0051.mrc,4 dga2016-08-09-84,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0052.mrc,4 dga2016-08-09-85,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0053.mrc,4 -dga2016-08-09-86,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0066.mrc,4 +dga2016-08-09-86,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV5443a0066.mrc,4 dga2016-08-09-87,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0087.mrc,4 dga2016-08-09-88,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0088.mrc,4 dga2016-08-09-89,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV5443a0089.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10075.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10075.csv index 314a802e6..7f9b76824 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10075.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10075.csv @@ -1,5 +1,5 @@ run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_series_quality -dga2016-08-13-1,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas10001.mrc,4 +dga2016-08-13-1,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas10001.mrc,4 dga2016-08-13-2,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,4.200000286102295,RAPTOR,rawdata/atlas10002.mrc,4 dga2016-08-13-3,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7n0028.mrc,4 dga2016-08-13-4,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas10003.mrc,4 @@ -23,7 +23,7 @@ dga2016-08-13-21,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,r dga2016-08-13-22,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,4.200000286102295,RAPTOR,rawdata/atlas4c0002.mrc,4 dga2016-08-13-23,,NON_FIDUCIAL,,None,None,,4.2,,rawdata/atlas4c0003.mrc,1 dga2016-08-13-24,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0001.mrc,4 -dga2016-08-13-25,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas9q0004.mrc,4 +dga2016-08-13-25,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas9q0004.mrc,4 dga2016-08-13-26,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0002.mrc,4 dga2016-08-13-27,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,4.200000286102295,RAPTOR,rawdata/atlas9q0005.mrc,4 dga2016-08-13-28,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/atlas7a0003.mrc,4 @@ -31,13 +31,13 @@ dga2016-08-13-29,,NON_FIDUCIAL,,None,None,,4.2,,rawdata/atlas9q0006.mrc,1 dga2016-08-13-30,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0004.mrc,4 dga2016-08-13-31,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas9q0007.mrc,4 dga2016-08-13-32,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0005.mrc,4 -dga2016-08-13-33,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0006.mrc,4 -dga2016-08-13-34,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas9q0008.mrc,4 +dga2016-08-13-33,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0006.mrc,4 +dga2016-08-13-34,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas9q0008.mrc,4 dga2016-08-13-35,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0007.mrc,4 dga2016-08-13-36,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,4.200000286102295,RAPTOR,rawdata/atlas8s0001.mrc,4 dga2016-08-13-37,,NON_FIDUCIAL,,None,None,,4.2,,rawdata/atlas7a0008.mrc,1 -dga2016-08-13-38,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas8s0002.mrc,4 -dga2016-08-13-39,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0009.mrc,4 +dga2016-08-13-38,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas8s0002.mrc,4 +dga2016-08-13-39,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0009.mrc,4 dga2016-08-13-40,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas6m00010007.mrc,4 dga2016-08-13-41,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/atlas6m00010008.mrc,4 dga2016-08-13-42,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0003.mrc,4 @@ -46,7 +46,7 @@ dga2016-08-13-44,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-13-45,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0004.mrc,4 dga2016-08-13-46,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/atlas7a0011.mrc,4 dga2016-08-13-47,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0005.mrc,4 -dga2016-08-13-48,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0012.mrc,4 +dga2016-08-13-48,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas7a0012.mrc,4 dga2016-08-13-49,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0006.mrc,4 dga2016-08-13-50,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7a0013.mrc,4 dga2016-08-13-51,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7n0024.mrc,4 @@ -73,7 +73,7 @@ dga2016-08-13-71,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-13-72,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0016.mrc,4 dga2016-08-13-73,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas6m00010002.mrc,4 dga2016-08-13-74,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas6m00010003.mrc,4 -dga2016-08-13-75,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas6m00010004.mrc,4 +dga2016-08-13-75,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/atlas6m00010004.mrc,4 dga2016-08-13-76,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas8s0017.mrc,4 dga2016-08-13-77,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas6m00010005.mrc,4 dga2016-08-13-78,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/atlas7n0026.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10077.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10077.csv index 70e5d1316..0d08b7763 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10077.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10077.csv @@ -1,96 +1,96 @@ run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-data_acquisition_software,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_series_quality,ts-tilting_scheme -dga2016-01-12-1,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10001.mrc,4,starting tilt to max then min +dga2016-01-12-1,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10001.mrc,4,starting tilt to max then min dga2016-01-12-2,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area10002.mrc,4,starting tilt to max then min dga2016-01-12-3,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area10003.mrc,4,starting tilt to max then min -dga2016-01-12-4,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10004.mrc,4,starting tilt to max then min -dga2016-01-12-5,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10005.mrc,4,starting tilt to max then min -dga2016-01-12-6,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10006.mrc,4,starting tilt to max then min -dga2016-01-12-7,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area90001.mrc,4,starting tilt to max then min +dga2016-01-12-4,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10004.mrc,4,starting tilt to max then min +dga2016-01-12-5,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10005.mrc,4,starting tilt to max then min +dga2016-01-12-6,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area10006.mrc,4,starting tilt to max then min +dga2016-01-12-7,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area90001.mrc,4,starting tilt to max then min dga2016-01-12-9,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area90003.mrc,4,starting tilt to max then min dga2016-01-12-10,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area90004.mrc,4,starting tilt to max then min dga2016-01-12-11,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,Undefined,4.2,RAPTOR,rawdata/tomo_area90005.mrc,4,min to max tilt -dga2016-01-12-12,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area90006.mrc,4,starting tilt to max then min +dga2016-01-12-12,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area90006.mrc,4,starting tilt to max then min dga2016-01-12-13,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area90007.mrc,4,starting tilt to max then min dga2016-01-12-14,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area90008.mrc,4,starting tilt to max then min dga2016-01-12-16,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area300010001.mrc,4,starting tilt to max then min -dga2016-01-12-17,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area300010002.mrc,4,starting tilt to max then min -dga2016-01-12-18,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area400010001.mrc,4,starting tilt to max then min -dga2016-01-12-19,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010008.mrc,4,starting tilt to max then min +dga2016-01-12-17,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area300010002.mrc,4,starting tilt to max then min +dga2016-01-12-18,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area400010001.mrc,4,starting tilt to max then min +dga2016-01-12-19,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010008.mrc,4,starting tilt to max then min dga2016-01-12-20,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area400010002.mrc,4,starting tilt to max then min -dga2016-01-12-21,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area400010003.mrc,4,starting tilt to max then min +dga2016-01-12-21,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area400010003.mrc,4,starting tilt to max then min dga2016-01-12-22,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area400010004.mrc,4,starting tilt to max then min dga2016-01-12-23,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area400010005.mrc,4,starting tilt to max then min dga2016-01-12-24,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area400010006.mrc,4,starting tilt to max then min dga2016-01-12-25,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area700010001.mrc,4,starting tilt to max then min -dga2016-01-12-26,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010002.mrc,4,starting tilt to max then min +dga2016-01-12-26,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010002.mrc,4,starting tilt to max then min dga2016-01-12-29,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area700010004.mrc,4,starting tilt to max then min dga2016-01-12-30,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area700010005.mrc,4,starting tilt to max then min dga2016-01-12-31,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area700010006.mrc,4,starting tilt to max then min dga2016-01-12-32,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/tomo_area700010007.mrc,4,starting tilt to max then min -dga2016-01-12-33,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010009.mrc,4,starting tilt to max then min +dga2016-01-12-33,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/tomo_area700010009.mrc,4,starting tilt to max then min dga2016-01-12-34,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/tomo_area700010010.mrc,4,starting tilt to max then min dga2016-01-12-38,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,Undefined,4.2,TOMO3D;RAPTOR,rawdata/tomo_area10004.mrc,4,min to max tilt dga2016-03-31-1,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas10001.mrc,4,starting tilt to max then min dga2016-03-31-2,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas10002.mrc,4,starting tilt to max then min -dga2016-03-31-4,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10004.mrc,4,starting tilt to max then min +dga2016-03-31-4,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10004.mrc,4,starting tilt to max then min dga2016-03-31-5,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas10005.mrc,4,starting tilt to max then min dga2016-03-31-6,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR,rawdata/dg20160329_7058_atlas10006.mrc,4,starting tilt to max then min -dga2016-03-31-8,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10008.mrc,4,starting tilt to max then min +dga2016-03-31-8,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799989827473958,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10008.mrc,4,starting tilt to max then min dga2016-03-31-9,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas10009.mrc,4,starting tilt to max then min dga2016-03-31-11,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas10011.mrc,4,starting tilt to max then min -dga2016-03-31-13,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10013.mrc,4,starting tilt to max then min +dga2016-03-31-13,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10013.mrc,4,starting tilt to max then min dga2016-03-31-14,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas10014.mrc,4,starting tilt to max then min -dga2016-03-31-15,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10015.mrc,4,starting tilt to max then min +dga2016-03-31-15,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10015.mrc,4,starting tilt to max then min dga2016-03-31-17,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas10017.mrc,4,starting tilt to max then min dga2016-03-31-19,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas10019.mrc,4,starting tilt to max then min -dga2016-03-31-20,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10020.mrc,4,starting tilt to max then min -dga2016-03-31-21,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10021.mrc,4,starting tilt to max then min +dga2016-03-31-20,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10020.mrc,4,starting tilt to max then min +dga2016-03-31-21,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas10021.mrc,4,starting tilt to max then min dga2016-03-31-22,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas20001.mrc,4,starting tilt to max then min dga2016-03-31-25,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas20004.mrc,4,starting tilt to max then min -dga2016-03-31-26,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas20005.mrc,4,starting tilt to max then min +dga2016-03-31-26,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas20005.mrc,4,starting tilt to max then min dga2016-03-31-27,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,Undefined,4.2,RAPTOR,rawdata/dg20160329_7058_atlas20006.mrc,4,min to max tilt dga2016-03-31-28,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas20007.mrc,4,starting tilt to max then min dga2016-03-31-29,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas30001.mrc,4,starting tilt to max then min dga2016-03-31-30,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas30002.mrc,4,starting tilt to max then min -dga2016-03-31-31,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30003.mrc,4,starting tilt to max then min +dga2016-03-31-31,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30003.mrc,4,starting tilt to max then min dga2016-03-31-32,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas30004.mrc,4,starting tilt to max then min -dga2016-03-31-33,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30005.mrc,4,starting tilt to max then min -dga2016-03-31-34,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70001.mrc,4,starting tilt to max then min -dga2016-03-31-36,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30006.mrc,4,starting tilt to max then min +dga2016-03-31-33,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30005.mrc,4,starting tilt to max then min +dga2016-03-31-34,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70001.mrc,4,starting tilt to max then min +dga2016-03-31-36,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30006.mrc,4,starting tilt to max then min dga2016-03-31-37,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160330_7058_atlas70010.mrc,4,starting tilt to max then min -dga2016-03-31-38,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30007.mrc,4,starting tilt to max then min +dga2016-03-31-38,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30007.mrc,4,starting tilt to max then min dga2016-03-31-40,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas30008.mrc,4,starting tilt to max then min -dga2016-03-31-41,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70012.mrc,4,starting tilt to max then min +dga2016-03-31-41,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70012.mrc,4,starting tilt to max then min dga2016-03-31-44,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas30010.mrc,4,starting tilt to max then min -dga2016-03-31-45,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70002.mrc,4,starting tilt to max then min +dga2016-03-31-45,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70002.mrc,4,starting tilt to max then min dga2016-03-31-46,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160330_7058_atlas70014.mrc,4,starting tilt to max then min dga2016-03-31-47,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799989827473958,UCSFTomo,4.200000286102295,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas30011.mrc,4,starting tilt to max then min dga2016-03-31-48,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160330_7058_atlas70015.mrc,1,starting tilt to max then min dga2016-03-31-49,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas30012.mrc,4,starting tilt to max then min -dga2016-03-31-50,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70016.mrc,4,starting tilt to max then min -dga2016-03-31-51,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30013.mrc,4,starting tilt to max then min +dga2016-03-31-50,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70016.mrc,4,starting tilt to max then min +dga2016-03-31-51,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799993896484374,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30013.mrc,4,starting tilt to max then min dga2016-03-31-52,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160330_7058_atlas70017.mrc,1,starting tilt to max then min dga2016-03-31-53,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR,rawdata/dg20160329_7058_atlas30015.mrc,4,starting tilt to max then min dga2016-03-31-56,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160330_7058_atlas70018.mrc,1,starting tilt to max then min dga2016-03-31-57,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas30016.mrc,4,starting tilt to max then min -dga2016-03-31-58,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30017.mrc,4,starting tilt to max then min +dga2016-03-31-58,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas30017.mrc,4,starting tilt to max then min dga2016-03-31-59,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160330_7058_atlas70004.mrc,4,starting tilt to max then min dga2016-03-31-60,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160330_7058_atlas70019.mrc,1,starting tilt to max then min dga2016-03-31-61,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas30018.mrc,4,starting tilt to max then min -dga2016-03-31-62,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70020.mrc,4,starting tilt to max then min -dga2016-03-31-65,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70006.mrc,4,starting tilt to max then min -dga2016-03-31-66,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70022.mrc,4,starting tilt to max then min +dga2016-03-31-62,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70020.mrc,4,starting tilt to max then min +dga2016-03-31-65,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70006.mrc,4,starting tilt to max then min +dga2016-03-31-66,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70022.mrc,4,starting tilt to max then min dga2016-03-31-67,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160330_7058_atlas70007.mrc,4,starting tilt to max then min -dga2016-03-31-70,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70025.mrc,4,starting tilt to max then min +dga2016-03-31-70,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160330_7058_atlas70025.mrc,4,starting tilt to max then min dga2016-03-31-72,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160330_7058_atlas70027.mrc,4,starting tilt to max then min dga2016-03-31-74,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,TOMO3D;RAPTOR,rawdata/dg20160330_7058_atlas70029.mrc,4,starting tilt to max then min dga2016-03-31-76,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160330_7058_atlas70031.mrc,4,starting tilt to max then min dga2016-03-31-77,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR,rawdata/dg20160330_7058_atlas70032.mrc,4,starting tilt to max then min dga2016-03-31-78,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160329_7058_atlas6a0001.mrc,1,starting tilt to max then min -dga2016-03-31-79,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas6a0002.mrc,4,starting tilt to max then min +dga2016-03-31-79,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,UCSFTomo,4.2,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas6a0002.mrc,4,starting tilt to max then min dga2016-03-31-80,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160329_7058_atlas6a0003.mrc,1,starting tilt to max then min dga2016-03-31-81,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799993896484374,UCSFTomo,4.200000286102295,TOMO3D;RAPTOR,rawdata/dg20160329_7058_atlas6a0004.mrc,4,starting tilt to max then min dga2016-03-31-83,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160329_7058_atlas6a0006.mrc,1,starting tilt to max then min -dga2016-03-31-84,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas6a0007.mrc,4,starting tilt to max then min +dga2016-03-31-84,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799989827473958,UCSFTomo,4.200000286102295,RAPTOR;TOMO3D,rawdata/dg20160329_7058_atlas6a0007.mrc,4,starting tilt to max then min dga2016-03-31-85,,NON_FIDUCIAL,,None,None,,UCSFTomo,4.2,,rawdata/dg20160329_7058_atlas6a0008.mrc,1,starting tilt to max then min dga2016-03-31-86,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,UCSFTomo,4.2,RAPTOR,rawdata/dg20160329_7058_atlas6a0009.mrc,4,starting tilt to max then min diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10080.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10080.csv index f531f0a91..547f7a320 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10080.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10080.csv @@ -1,11 +1,11 @@ run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path,ts-tilt_series_quality -dga2016-08-11-1,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0009.mrc,4 +dga2016-08-11-1,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0009.mrc,4 dga2016-08-11-2,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670001.mrc,4 -dga2016-08-11-3,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0010.mrc,4 +dga2016-08-11-3,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0010.mrc,4 dga2016-08-11-4,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670002.mrc,4 dga2016-08-11-5,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/7967-gridb-atlas3a0011.mrc,4 -dga2016-08-11-6,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670003.mrc,4 -dga2016-08-11-7,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0012.mrc,4 +dga2016-08-11-6,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670003.mrc,4 +dga2016-08-11-7,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/7967-gridb-atlas3a0012.mrc,4 dga2016-08-11-9,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/7967-gridb-atlas3a0013.mrc,4 dga2016-08-11-10,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670005.mrc,4 dga2016-08-11-11,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/7967-gridb-atlas3a0014.mrc,4 @@ -41,28 +41,28 @@ dga2016-08-11-42,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAP dga2016-08-11-43,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/7967-gridb-atlas3a0030.mrc,4 dga2016-08-11-44,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670022.mrc,4 dga2016-08-11-45,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/7967-gridb-atlas3a0031.mrc,4 -dga2016-08-11-46,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670023.mrc,4 +dga2016-08-11-46,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670023.mrc,4 dga2016-08-11-47,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670024.mrc,4 -dga2016-08-11-48,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670025.mrc,4 +dga2016-08-11-48,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670025.mrc,4 dga2016-08-11-51,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.800001017252605,4.200000286102295,RAPTOR,rawdata/JV79670028.mrc,4 dga2016-08-11-52,,NON_FIDUCIAL,,None,None,,4.2,,rawdata/JV79670029.mrc,1 dga2016-08-11-54,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670031.mrc,4 dga2016-08-11-55,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670032.mrc,4 -dga2016-08-11-56,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670033.mrc,4 +dga2016-08-11-56,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670033.mrc,4 dga2016-08-11-57,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670034.mrc,4 dga2016-08-11-58,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670035.mrc,4 dga2016-08-11-59,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670036.mrc,4 dga2016-08-11-61,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670038.mrc,4 -dga2016-08-11-62,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670039.mrc,4 -dga2016-08-11-63,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670040.mrc,4 +dga2016-08-11-62,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670039.mrc,4 +dga2016-08-11-63,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670040.mrc,4 dga2016-08-11-64,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670041.mrc,4 dga2016-08-11-65,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670048.mrc,4 dga2016-08-11-66,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670042.mrc,4 dga2016-08-11-67,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670049.mrc,4 dga2016-08-11-68,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/JV79670043.mrc,4 -dga2016-08-11-69,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670044.mrc,4 -dga2016-08-11-70,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670045.mrc,4 -dga2016-08-11-71,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670046.mrc,4 +dga2016-08-11-69,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670044.mrc,4 +dga2016-08-11-70,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670045.mrc,4 +dga2016-08-11-71,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,RAPTOR;TOMO3D,rawdata/JV79670046.mrc,4 dga2016-08-11-72,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.8,4.2,TOMO3D;RAPTOR,rawdata/JV79670047.mrc,4 dga2016-08-11-73,['RAPTOR'],FIDUCIAL,,Weighted back projection,IMOD,16.8,4.2,RAPTOR,rawdata/7967-gridb-atlas3a0005.mrc,4 dga2016-08-11-74,['TOMO3D'],FIDUCIAL,tomo3D,SIRT,TOMO3D,16.799989827473958,4.200000286102295,TOMO3D;RAPTOR,rawdata/7967-gridb-atlas3a0001.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10081.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10081.csv index 71369e845..b4e269196 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10081.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10081.csv @@ -1,26 +1,26 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,ts-tilt_alignment_software,ts-tilt_series_path dga2017-07-06-168,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0051.mrc -dga2017-07-06-169,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0053.mrc +dga2017-07-06-169,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0053.mrc dga2017-07-06-170,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0055.mrc -dga2017-07-06-171,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0057.mrc +dga2017-07-06-171,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0057.mrc dga2017-07-06-172,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0059.mrc -dga2017-07-06-173,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0061.mrc +dga2017-07-06-173,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0061.mrc dga2017-07-06-174,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0001.mrc -dga2017-07-06-175,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0002.mrc +dga2017-07-06-175,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0002.mrc dga2017-07-06-176,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0003.mrc dga2017-07-06-177,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0004.mrc dga2017-07-06-178,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0005.mrc -dga2017-07-06-179,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0006.mrc +dga2017-07-06-179,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0006.mrc dga2017-07-06-180,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0007.mrc -dga2017-07-06-181,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0008.mrc -dga2017-07-06-182,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0009.mrc -dga2017-07-06-183,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0010.mrc +dga2017-07-06-181,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0008.mrc +dga2017-07-06-182,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0009.mrc +dga2017-07-06-183,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0010.mrc dga2017-07-06-184,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0011.mrc -dga2017-07-06-185,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0012.mrc -dga2017-07-06-186,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0013.mrc -dga2017-07-06-187,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0014.mrc -dga2017-07-06-188,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0015.mrc -dga2017-07-06-189,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0016.mrc +dga2017-07-06-185,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0012.mrc +dga2017-07-06-186,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0013.mrc +dga2017-07-06-187,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0014.mrc +dga2017-07-06-188,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0015.mrc +dga2017-07-06-189,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0016.mrc dga2017-07-06-190,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0017.mrc dga2017-07-06-191,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0018.mrc dga2017-07-06-192,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0019.mrc @@ -30,9 +30,9 @@ dga2017-07-06-195,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas dga2017-07-06-196,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0023.mrc dga2017-07-06-197,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0024.mrc dga2017-07-06-198,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0025.mrc -dga2017-07-06-199,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0026.mrc -dga2017-07-06-200,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0027.mrc -dga2017-07-06-201,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0028.mrc +dga2017-07-06-199,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0026.mrc +dga2017-07-06-200,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0027.mrc +dga2017-07-06-201,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0028.mrc dga2017-07-06-202,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0029.mrc dga2017-07-06-203,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0030.mrc dga2017-07-06-204,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0031.mrc @@ -45,7 +45,7 @@ dga2017-07-06-210,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas dga2017-07-06-211,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0039.mrc dga2017-07-06-212,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0040.mrc dga2017-07-06-213,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0041.mrc -dga2017-07-06-214,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0042.mrc +dga2017-07-06-214,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0042.mrc dga2017-07-06-215,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0043.mrc dga2017-07-06-216,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0044.mrc dga2017-07-06-217,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0045.mrc @@ -54,9 +54,9 @@ dga2017-07-06-219,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area dga2017-07-06-220,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0048.mrc dga2017-07-06-221,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0049.mrc dga2017-07-06-222,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0050.mrc -dga2017-07-06-223,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0052.mrc +dga2017-07-06-223,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0052.mrc dga2017-07-06-224,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0054.mrc dga2017-07-06-225,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0056.mrc -dga2017-07-06-226,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0058.mrc +dga2017-07-06-226,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas-area1-20170706-JV9082tomo0058.mrc dga2017-07-06-227,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0060.mrc dga2017-07-06-228,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/atlas-area1-20170706-JV9082tomo0032.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10084.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10084.csv index c2e82d446..e36d62216 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10084.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10084.csv @@ -1,80 +1,80 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-reconstruction_method,tomo-reconstruction_software,ts-tilt_alignment_software,ts-tilt_series_path dga2017-07-08-1,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0001.mrc -dga2017-07-08-2,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0035.mrc +dga2017-07-08-2,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0035.mrc dga2017-07-08-3,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area1-20170707-JV9114tomo0002.mrc -dga2017-07-08-4,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0036.mrc -dga2017-07-08-5,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0003.mrc -dga2017-07-08-6,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0037.mrc +dga2017-07-08-4,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0036.mrc +dga2017-07-08-5,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0003.mrc +dga2017-07-08-6,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0037.mrc dga2017-07-08-7,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0004.mrc -dga2017-07-08-8,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0038.mrc -dga2017-07-08-9,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0005.mrc -dga2017-07-08-10,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0039.mrc -dga2017-07-08-11,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0006.mrc -dga2017-07-08-13,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0007.mrc -dga2017-07-08-14,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0046.mrc +dga2017-07-08-8,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0038.mrc +dga2017-07-08-9,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0005.mrc +dga2017-07-08-10,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0039.mrc +dga2017-07-08-11,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0006.mrc +dga2017-07-08-13,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0007.mrc +dga2017-07-08-14,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0046.mrc dga2017-07-08-15,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0008.mrc -dga2017-07-08-16,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0047.mrc +dga2017-07-08-16,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0047.mrc dga2017-07-08-17,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0009.mrc -dga2017-07-08-18,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0048.mrc +dga2017-07-08-18,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0048.mrc dga2017-07-08-19,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area1-20170707-JV9114tomo0010.mrc dga2017-07-08-20,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0051.mrc dga2017-07-08-21,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0011.mrc -dga2017-07-08-22,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0050.mrc -dga2017-07-08-23,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0012.mrc -dga2017-07-08-24,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0052.mrc -dga2017-07-08-25,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0013.mrc -dga2017-07-08-26,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0053.mrc +dga2017-07-08-22,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0050.mrc +dga2017-07-08-23,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0012.mrc +dga2017-07-08-24,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0052.mrc +dga2017-07-08-25,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0013.mrc +dga2017-07-08-26,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0053.mrc dga2017-07-08-27,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0014.mrc dga2017-07-08-28,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0054.mrc -dga2017-07-08-29,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0015.mrc -dga2017-07-08-30,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0055.mrc +dga2017-07-08-29,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0015.mrc +dga2017-07-08-30,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0055.mrc dga2017-07-08-31,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0016.mrc dga2017-07-08-32,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0056.mrc dga2017-07-08-33,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0017.mrc -dga2017-07-08-34,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0057.mrc +dga2017-07-08-34,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0057.mrc dga2017-07-08-35,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0018.mrc -dga2017-07-08-36,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0058.mrc +dga2017-07-08-36,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0058.mrc dga2017-07-08-37,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0019.mrc dga2017-07-08-38,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0059.mrc dga2017-07-08-39,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0020.mrc dga2017-07-08-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0060.mrc dga2017-07-08-41,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0021.mrc -dga2017-07-08-42,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0044.mrc +dga2017-07-08-42,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0044.mrc dga2017-07-08-43,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0061.mrc -dga2017-07-08-44,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0022.mrc -dga2017-07-08-45,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0062.mrc +dga2017-07-08-44,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0022.mrc +dga2017-07-08-45,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0062.mrc dga2017-07-08-46,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0023.mrc dga2017-07-08-47,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0034.mrc dga2017-07-08-48,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0063.mrc dga2017-07-08-49,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0024.mrc dga2017-07-08-50,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0064.mrc dga2017-07-08-51,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0025.mrc -dga2017-07-08-52,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0065.mrc +dga2017-07-08-52,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0065.mrc dga2017-07-08-53,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0026.mrc dga2017-07-08-54,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170708-JV9114tomo0001a0066.mrc dga2017-07-08-55,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0027.mrc -dga2017-07-08-56,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0067.mrc +dga2017-07-08-56,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170708-JV9114tomo0001a0067.mrc dga2017-07-08-57,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0028.mrc dga2017-07-08-58,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0001.mrc dga2017-07-08-59,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0029.mrc dga2017-07-08-60,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0002.mrc -dga2017-07-08-61,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0030.mrc +dga2017-07-08-61,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0030.mrc dga2017-07-08-62,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0003.mrc -dga2017-07-08-63,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0031.mrc -dga2017-07-08-64,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0004.mrc +dga2017-07-08-63,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0031.mrc +dga2017-07-08-64,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0004.mrc dga2017-07-08-65,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0032.mrc -dga2017-07-08-66,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0005.mrc +dga2017-07-08-66,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0005.mrc dga2017-07-08-67,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area1-20170707-JV9114tomo0033.mrc dga2017-07-08-68,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0041.mrc dga2017-07-08-69,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0006.mrc -dga2017-07-08-70,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0042.mrc +dga2017-07-08-70,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0042.mrc dga2017-07-08-71,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0007.mrc dga2017-07-08-72,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area1-20170707-JV9114tomo0043.mrc dga2017-07-08-73,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0008.mrc -dga2017-07-08-74,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0045.mrc +dga2017-07-08-74,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area1-20170707-JV9114tomo0045.mrc dga2017-07-08-75,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0009.mrc dga2017-07-08-76,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0010.mrc -dga2017-07-08-77,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0011.mrc +dga2017-07-08-77,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0011.mrc dga2017-07-08-78,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0012.mrc dga2017-07-08-79,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0013.mrc dga2017-07-08-80,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0014.mrc @@ -82,24 +82,24 @@ dga2017-07-08-81,['RAPTOR'],IMOD,Weighted back projection,IMOD,RAPTOR;RAPTOR,raw dga2017-07-08-82,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0016.mrc dga2017-07-08-83,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0017.mrc dga2017-07-08-84,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0018.mrc -dga2017-07-08-85,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0019.mrc -dga2017-07-08-86,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0020.mrc +dga2017-07-08-85,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0019.mrc +dga2017-07-08-86,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0020.mrc dga2017-07-08-87,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0021.mrc -dga2017-07-08-88,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0022.mrc +dga2017-07-08-88,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0022.mrc dga2017-07-08-89,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0023.mrc dga2017-07-08-90,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0024.mrc -dga2017-07-08-91,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0025.mrc +dga2017-07-08-91,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0025.mrc dga2017-07-08-92,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0026.mrc -dga2017-07-08-93,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0027.mrc -dga2017-07-08-94,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0028.mrc +dga2017-07-08-93,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0027.mrc +dga2017-07-08-94,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0028.mrc dga2017-07-08-95,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0029.mrc dga2017-07-08-96,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0030.mrc dga2017-07-08-97,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/area2-20170708-JV9114tomo0001p0031.mrc -dga2017-07-08-98,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0032.mrc -dga2017-07-08-99,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0033.mrc -dga2017-07-08-100,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0034.mrc -dga2017-07-08-101,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0035.mrc -dga2017-07-08-102,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0036.mrc -dga2017-07-08-103,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0037.mrc -dga2017-07-08-104,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0038.mrc -dga2017-07-08-105,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0039.mrc +dga2017-07-08-98,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0032.mrc +dga2017-07-08-99,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0033.mrc +dga2017-07-08-100,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0034.mrc +dga2017-07-08-101,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0035.mrc +dga2017-07-08-102,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0036.mrc +dga2017-07-08-103,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0037.mrc +dga2017-07-08-104,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0038.mrc +dga2017-07-08-105,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/area2-20170708-JV9114tomo0001p0039.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10097.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10097.csv index 401a042eb..e097d53fa 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10097.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10097.csv @@ -37,9 +37,9 @@ dga2016-01-15-37,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_a dga2016-01-15-38,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010055.mrc dga2016-01-15-39,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010022.mrc dga2016-01-15-40,['TOMO3D'],tomo3D,SIRT,TOMO3D,TOMO3D;RAPTOR,rawdata/tomo_area1000100010056.mrc -dga2016-01-15-41,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1000100010023.mrc +dga2016-01-15-41,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1000100010023.mrc dga2016-01-15-42,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010038.mrc -dga2016-01-15-43,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area1000100010057.mrc +dga2016-01-15-43,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area1000100010057.mrc dga2016-01-15-44,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010024.mrc dga2016-01-15-45,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010025.mrc dga2016-01-15-46,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010058.mrc @@ -69,7 +69,7 @@ dga2016-01-15-69,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_a dga2016-01-15-70,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area1000100010070.mrc dga2016-01-15-71,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area6_100010001.mrc dga2016-01-15-72,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area6_100010002.mrc -dga2016-01-15-73,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/tomo_area6_100010003.mrc +dga2016-01-15-73,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/tomo_area6_100010003.mrc dga2016-01-15-74,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area6_100010004.mrc dga2016-01-15-75,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area6_100010005.mrc dga2016-01-15-76,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/tomo_area4c_1000100010001.mrc @@ -83,7 +83,7 @@ dga2016-01-15-84,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_ dga2016-01-15-85,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0010.mrc dga2016-01-15-86,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0011.mrc dga2016-01-15-87,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0001.mrc -dga2016-01-15-88,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR;TOMO3D,rawdata/atlas_area_a0002.mrc +dga2016-01-15-88,['TOMO3D'],tomo3D,SIRT,TOMO3D,RAPTOR;TOMO3D,rawdata/atlas_area_a0002.mrc dga2016-01-15-89,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0012.mrc dga2016-01-15-90,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0013.mrc dga2016-01-15-91,['RAPTOR'],,Weighted back projection,IMOD,RAPTOR,rawdata/atlas_area_a0014.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10105.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10105.csv index e0b5fd8b7..5f1a57795 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10105.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10105.csv @@ -1,19 +1,19 @@ -run_name,tomo-processing_software,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -scd2018-07-15-1,IMOD,Weighted back projection,6.5200000000000005,IMOD;IMOD,rawdata/tomography1.mrc -scd2018-07-15-2,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography2.mrc -scd2018-07-15-3,,Weighted back projection,13.040000000000001,IMOD;IMOD,rawdata/tomography3.mrc -scd2018-07-15-4,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography4.mrc -scd2018-07-15-5,IMOD,Weighted back projection,6.5200000000000005,IMOD,rawdata/tomography5.mrc -scd2018-07-15-6,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography6.mrc -scd2018-07-15-7,IMOD,Weighted back projection,6.5200000000000005,IMOD,rawdata/tomography7.mrc -scd2018-07-15-8,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography8.mrc -scd2018-07-15-9,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography9.mrc -scd2018-07-15-10,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography10.mrc -scd2018-07-15-11,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography11.mrc -scd2018-07-15-12,IMOD,SIRT,13.040000000000001,IMOD;IMOD,rawdata/tomography12.mrc -scd2018-07-15-13,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography13.mrc -scd2018-07-15-14,,Weighted back projection,13.040000000000001,IMOD;IMOD,rawdata/tomography14.mrc -scd2018-07-15-15,,Weighted back projection,13.040000000000001,IMOD;IMOD,rawdata/tomography15.mrc -scd2018-07-15-16,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography16.mrc -scd2018-07-15-17,IMOD,Weighted back projection,6.5200000000000005,IMOD,rawdata/tomography17.mrc -scd2018-07-15-18,IMOD,Weighted back projection,13.040000000000001,IMOD,rawdata/tomography18.mrc +run_name,tomo-processing_software,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path +scd2018-07-15-1,,13.040000000000001,IMOD;IMOD,rawdata/tomography1.mrc +scd2018-07-15-2,IMOD,13.040000000000001,IMOD,rawdata/tomography2.mrc +scd2018-07-15-3,,13.040000000000001,IMOD;IMOD,rawdata/tomography3.mrc +scd2018-07-15-4,IMOD,13.040000000000001,IMOD,rawdata/tomography4.mrc +scd2018-07-15-5,IMOD,6.5200000000000005,IMOD,rawdata/tomography5.mrc +scd2018-07-15-6,IMOD,13.040000000000001,IMOD,rawdata/tomography6.mrc +scd2018-07-15-7,IMOD,6.5200000000000005,IMOD,rawdata/tomography7.mrc +scd2018-07-15-8,IMOD,13.040000000000001,IMOD,rawdata/tomography8.mrc +scd2018-07-15-9,IMOD,13.040000000000001,IMOD,rawdata/tomography9.mrc +scd2018-07-15-10,IMOD,13.040000000000001,IMOD,rawdata/tomography10.mrc +scd2018-07-15-11,IMOD,13.040000000000001,IMOD,rawdata/tomography11.mrc +scd2018-07-15-12,IMOD,6.5200000000000005,IMOD;IMOD,rawdata/tomography12.mrc +scd2018-07-15-13,IMOD,13.040000000000001,IMOD,rawdata/tomography13.mrc +scd2018-07-15-14,,13.040000000000001,IMOD;IMOD,rawdata/tomography14.mrc +scd2018-07-15-15,,13.040000000000001,IMOD;IMOD,rawdata/tomography15.mrc +scd2018-07-15-16,IMOD,13.040000000000001,IMOD,rawdata/tomography16.mrc +scd2018-07-15-17,IMOD,6.5200000000000005,IMOD,rawdata/tomography17.mrc +scd2018-07-15-18,IMOD,13.040000000000001,IMOD,rawdata/tomography18.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10106.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10106.csv index 56563f07e..3eacc5e59 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10106.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10106.csv @@ -1,11 +1,11 @@ run_name,tomo-align_softwares,tomo-processing_software,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -scd2018-03-22-1,['IMOD'],IMOD,7.112,1.778,IMOD;IMOD,rawdata/tomography11.mrc +scd2018-03-22-1,['IMOD'],,7.112,1.778,IMOD;IMOD,rawdata/tomography11.mrc scd2018-03-22-2,['IMOD'],IMOD,7.112,1.778,IMOD,rawdata/tomography10.mrc -scd2018-03-22-3,['IMOD'],IMOD,7.038,3.519,IMOD;IMOD,rawdata/tomography9.mrc +scd2018-03-22-3,['IMOD'],,14.076,3.519,IMOD;IMOD,rawdata/tomography9.mrc scd2018-03-22-4,['RAPTOR'],,14.076,3.519,RAPTOR,rawdata/tomography8.mrc scd2018-03-22-5,['IMOD'],IMOD,14.076,3.519,IMOD,rawdata/tomography7.mrc scd2018-03-22-6,['IMOD'],IMOD,14.076,3.519,IMOD,rawdata/tomography6.mrc scd2018-03-22-7,['IMOD'],IMOD,14.076,3.519,IMOD,rawdata/tomography5.mrc scd2018-03-22-8,['RAPTOR'],,14.076,3.519,RAPTOR,rawdata/tomography4.mrc -scd2018-03-22-9,['IMOD'],IMOD,7.038,3.519,IMOD;IMOD,rawdata/tomography3.mrc -scd2018-03-22-10,['IMOD'],IMOD,7.038,3.519,IMOD;IMOD,rawdata/tomography2.mrc +scd2018-03-22-9,['IMOD'],,14.076,3.519,IMOD;IMOD,rawdata/tomography3.mrc +scd2018-03-22-10,['IMOD'],,14.076,3.519,IMOD;IMOD,rawdata/tomography2.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10108.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10108.csv index 9eebee5f2..dbfc35760 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10108.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10108.csv @@ -1,11 +1,11 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -scd2017-01-16-1,Weighted back projection,25.312,6.328,IMOD,rawdata/tomography6.mrc -scd2017-01-16-2,Weighted back projection,25.312,6.328,IMOD,rawdata/tomography5.mrc -scd2017-01-16-3,Weighted back projection,50.624,12.656,IMOD,rawdata/tomography7.mrc -scd2017-01-16-5,Weighted back projection,25.312,6.328,IMOD;IMOD,rawdata/tomography4.mrc -scd2017-01-16-6,Weighted back projection,25.312,12.656,IMOD;IMOD,rawdata/tomography9.mrc -scd2017-01-16-7,Weighted back projection,25.312,12.656,IMOD,rawdata/tomography10.mrc -scd2017-01-16-8,Weighted back projection,25.312,6.328,IMOD,rawdata/tomography3.mrc -scd2017-01-16-9,Weighted back projection,25.312,12.656,IMOD,rawdata/tomography11.mrc -scd2017-01-16-10,SIRT,25.312,6.328,IMOD;IMOD,rawdata/tomography2.mrc -scd2017-01-16-13,Weighted back projection,25.312,6.328,IMOD;IMOD,rawdata/tomography1.mrc +run_name,tomo-voxel_spacing,ts-pixel_spacing,ts-tilt_alignment_software,ts-tilt_series_path +scd2017-01-16-1,25.312,6.328,IMOD,rawdata/tomography6.mrc +scd2017-01-16-2,25.312,6.328,IMOD,rawdata/tomography5.mrc +scd2017-01-16-3,50.624,12.656,IMOD,rawdata/tomography7.mrc +scd2017-01-16-5,25.312,6.328,IMOD;IMOD,rawdata/tomography4.mrc +scd2017-01-16-6,25.312,12.656,IMOD;IMOD,rawdata/tomography9.mrc +scd2017-01-16-7,25.312,12.656,IMOD,rawdata/tomography10.mrc +scd2017-01-16-8,25.312,6.328,IMOD,rawdata/tomography3.mrc +scd2017-01-16-9,25.312,12.656,IMOD,rawdata/tomography11.mrc +scd2017-01-16-10,25.312,6.328,IMOD;IMOD,rawdata/tomography2.mrc +scd2017-01-16-13,25.312,6.328,IMOD;IMOD,rawdata/tomography1.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10145.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10145.csv index 1fa35cc59..b0d2350e1 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10145.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10145.csv @@ -1,30 +1,30 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -ycw2017-06-07-13,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10002.mrc -ycw2017-06-07-14,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10003.mrc -ycw2017-06-07-15,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10004.mrc -ycw2017-06-07-16,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10005.mrc -ycw2017-06-07-17,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10006.mrc -ycw2017-06-07-20,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10009.mrc -ycw2017-06-07-26,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10015.mrc -ycw2017-06-07-28,Weighted back projection,16.145,RAPTOR,rawdata/20170607_YWC230_10017.mrc -ycw2017-06-07-30,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10019.mrc -ycw2017-06-07-31,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10020.mrc -ycw2017-06-07-32,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10021.mrc -ycw2017-06-07-33,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10022.mrc -ycw2017-06-07-34,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10023.mrc -ycw2017-06-07-35,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10024.mrc -ycw2017-06-07-36,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10025.mrc -ycw2017-06-07-37,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10026.mrc -ycw2017-06-07-38,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10027.mrc -ycw2017-06-07-39,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10028.mrc -ycw2017-06-07-40,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10029.mrc -ycw2017-06-07-41,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10030.mrc -ycw2017-06-07-42,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10032.mrc -ycw2017-06-07-43,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10033.mrc -ycw2017-06-07-44,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10034.mrc -ycw2017-06-07-45,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10035.mrc -ycw2017-06-07-46,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10036.mrc -ycw2017-06-07-47,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10037.mrc -ycw2017-06-07-48,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10038.mrc -ycw2017-06-07-49,SIRT,7.800000000000001,RAPTOR;RAPTOR,rawdata/20170607_YWC230_20001.mrc -ycw2017-06-07-50,Weighted back projection,16.145,RAPTOR;RAPTOR,rawdata/20170607_YWC230_20002.mrc +run_name,ts-tilt_alignment_software,ts-tilt_series_path +ycw2017-06-07-13,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10002.mrc +ycw2017-06-07-14,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10003.mrc +ycw2017-06-07-15,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10004.mrc +ycw2017-06-07-16,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10005.mrc +ycw2017-06-07-17,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10006.mrc +ycw2017-06-07-20,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10009.mrc +ycw2017-06-07-26,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10015.mrc +ycw2017-06-07-28,RAPTOR,rawdata/20170607_YWC230_10017.mrc +ycw2017-06-07-30,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10019.mrc +ycw2017-06-07-31,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10020.mrc +ycw2017-06-07-32,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10021.mrc +ycw2017-06-07-33,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10022.mrc +ycw2017-06-07-34,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10023.mrc +ycw2017-06-07-35,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10024.mrc +ycw2017-06-07-36,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10025.mrc +ycw2017-06-07-37,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10026.mrc +ycw2017-06-07-38,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10027.mrc +ycw2017-06-07-39,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10028.mrc +ycw2017-06-07-40,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10029.mrc +ycw2017-06-07-41,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10030.mrc +ycw2017-06-07-42,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10032.mrc +ycw2017-06-07-43,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10033.mrc +ycw2017-06-07-44,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10034.mrc +ycw2017-06-07-45,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10035.mrc +ycw2017-06-07-46,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10036.mrc +ycw2017-06-07-47,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10037.mrc +ycw2017-06-07-48,RAPTOR;RAPTOR,rawdata/20170607_YWC230_10038.mrc +ycw2017-06-07-49,RAPTOR;RAPTOR,rawdata/20170607_YWC230_20001.mrc +ycw2017-06-07-50,RAPTOR;RAPTOR,rawdata/20170607_YWC230_20002.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10155.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10155.csv index 861497deb..e0593fe91 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10155.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10155.csv @@ -34,7 +34,7 @@ ycw2012-11-14-64,['RAPTOR'],FIDUCIAL,13.059000000000001,K2,UCSFTomo,FEI,Polara,3 ycw2012-11-14-65,['RAPTOR'],FIDUCIAL,13.059000000000001,K2,UCSFTomo,FEI,Polara,3.265,2.0,RAPTOR,60.0,-60.0,rawdata/Bdellovibrio_wt_20121114_0030024.mrc,1.5,starting tilt to max then min,110.0 ycw2012-11-14-66,['RAPTOR'],FIDUCIAL,13.059000000000001,K2,UCSFTomo,FEI,Polara,3.265,2.0,RAPTOR,60.0,-60.0,rawdata/Bdellovibrio_wt_20121114_0030025.mrc,1.5,starting tilt to max then min,110.0 ycw2012-12-05-28,['RAPTOR'],FIDUCIAL,16.145,K2,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR,60.0,-60.0,rawdata/Invasion_complex_120002.mrc,1.0,starting tilt to max then min,114.0 -ycw2013-05-01-10,['RAPTOR'],FIDUCIAL,16.8,K2,UCSF Tomo,TFS,Krios,4.829,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0010.mrc,1.0,starting tilt to max then min,100.0 +ycw2013-05-01-10,['RAPTOR'],FIDUCIAL,19.315,K2,UCSF Tomo,TFS,Krios,4.829,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0010.mrc,1.0,starting tilt to max then min,100.0 ycw2013-05-01-11,['RAPTOR'],FIDUCIAL,19.315,K2,UCSF Tomo,TFS,Krios,4.829,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0011.mrc,1.0,starting tilt to max then min,100.0 ycw2013-05-01-15,['RAPTOR'],FIDUCIAL,19.315,K2,UCSF Tomo,TFS,Krios,4.829,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0015.mrc,1.0,starting tilt to max then min,100.0 ycw2013-05-01-25,['RAPTOR'],FIDUCIAL,19.315,K2,UCSF Tomo,TFS,Krios,4.829,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0025.mrc,1.0,starting tilt to max then min,100.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10156.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10156.csv index 4917bba6d..e41181edd 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10156.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10156.csv @@ -1,8 +1,8 @@ run_name,tomo-voxel_spacing,ts-data_acquisition_software,ts-microscope-manufacturer,ts-microscope-model,ts-pixel_spacing,ts-spherical_aberration_constant,ts-tilt_alignment_software,ts-tilt_range-max,ts-tilt_range-min,ts-tilt_series_path,ts-tilt_step,ts-total_flux -ycw2012-12-05-10,20.0,UCSF Tomo,FEI,Polara,4.933,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_2_001.mrc,1.0,73.0 +ycw2012-12-05-10,19.733,UCSF Tomo,FEI,Polara,4.933,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_2_001.mrc,1.0,73.0 ycw2012-12-05-11,19.733,UCSF Tomo,FEI,Polara,4.933,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_4_001.mrc,1.0,73.0 -ycw2012-12-05-13,1.6400000000000001,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_50001.mrc,1.0,114.0 -ycw2012-12-05-14,1.6400000000000001,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_60001.mrc,1.0,114.0 +ycw2012-12-05-13,16.145,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_50001.mrc,1.0,114.0 +ycw2012-12-05-14,16.145,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_60001.mrc,1.0,114.0 ycw2012-12-05-15,16.145,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_70001.mrc,1.0,114.0 ycw2012-12-05-16,16.145,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_80001.mrc,1.0,114.0 ycw2012-12-05-17,16.145,UCSF Tomo,FEI,Polara,4.0360000000000005,2.0,RAPTOR;RAPTOR,60.0,-60.0,rawdata/Invasion_complex_80002.mrc,1.0,114.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10157.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10157.csv index 2d34d7866..5fd96c044 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10157.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10157.csv @@ -3,17 +3,17 @@ ycw2013-05-01-1,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-t ycw2013-05-01-4,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0004.mrc,100.0 ycw2013-05-01-5,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0005.mrc,100.0 ycw2013-05-01-6,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0006.mrc,100.0 -ycw2013-05-01-8,16.8,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0008.mrc,100.0 +ycw2013-05-01-8,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0008.mrc,100.0 ycw2013-05-01-9,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0009.mrc,100.0 ycw2013-05-01-12,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0012.mrc,100.0 ycw2013-05-01-13,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0013.mrc,100.0 ycw2013-05-01-14,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0014.mrc,100.0 ycw2013-05-01-16,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0016.mrc,100.0 ycw2013-05-01-19,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0019.mrc,100.0 -ycw2013-05-01-20,16.8,UCSF Tomo,TFS,Krios,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0020.mrc,100.0 +ycw2013-05-01-20,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0020.mrc,100.0 ycw2013-05-01-21,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0021.mrc,100.0 ycw2013-05-01-22,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0022.mrc,100.0 -ycw2013-05-01-23,16.8,UCSF Tomo,TFS,Krios,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0023.mrc,100.0 +ycw2013-05-01-23,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0023.mrc,100.0 ycw2013-05-01-24,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0024.mrc,100.0 ycw2013-05-01-26,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0026.mrc,100.0 ycw2013-05-01-29,19.315,UCSF Tomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0030.mrc,100.0 @@ -24,7 +24,7 @@ ycw2013-05-01-36,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3 ycw2013-05-01-37,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30004.mrc,100.0 ycw2013-05-01-38,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30005.mrc,100.0 ycw2013-05-01-39,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30006.mrc,100.0 -ycw2013-05-01-41,16.8,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30008.mrc,100.0 +ycw2013-05-01-41,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR;RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30008.mrc,100.0 ycw2013-05-01-52,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries_30010.mrc,100.0 ycw2013-05-01-57,19.315,UCSF Tomo,FEI,Polara,2.0,RAPTOR,65.0,-65.0,rawdata/grid3-tiltseries0007.mrc,100.0 ycw2013-06-04-1,19.315,UCSFTomo,TFS,Krios,2.7,RAPTOR,65.0,-65.0,rawdata/atlas_29x29_20001.mrc,120.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10176.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10176.csv index 1c94e23e8..f2d930cf8 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10176.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10176.csv @@ -1,22 +1,22 @@ -run_name,tomo-reconstruction_method,ts-tilt_alignment_software,ts-tilt_series_path -cwl2011-08-14-1,Weighted back projection,IMOD,rawdata/11aug14_0001.st -cwl2011-08-14-2,Weighted back projection,IMOD,rawdata/11aug14_1_C88_1.st -cwl2011-08-14-3,Weighted back projection,IMOD,rawdata/11aug14_0002.st -cwl2011-08-14-4,Weighted back projection,IMOD,rawdata/11aug14_2_C88_1.st -cwl2011-08-14-5,Weighted back projection,IMOD,rawdata/11aug14_0003_ns.st -cwl2011-08-14-6,Weighted back projection,IMOD,rawdata/11aug14_3_C89_3.st -cwl2011-08-14-7,Weighted back projection,IMOD,rawdata/11aug14_0005_ns.st -cwl2011-08-14-8,Weighted back projection,IMOD,rawdata/11aug14_0008_ns.st -cwl2011-08-14-9,Weighted back projection,IMOD,rawdata/11aug14_0009.st -cwl2011-08-14-10,Weighted back projection,IMOD,rawdata/11aug14_0011.st -cwl2011-08-14-11,Weighted back projection,IMOD,rawdata/11aug14_0012.st -cwl2011-08-14-12,Weighted back projection,IMOD,rawdata/11aug14_0013_ns.st -cwl2011-08-14-13,Weighted back projection,IMOD,rawdata/11aug14_0014.st -cwl2011-08-14-14,SIRT,IMOD;IMOD,rawdata/11aug14_0015.st -cwl2011-08-14-15,Weighted back projection,IMOD,rawdata/11aug14_0016.st -cwl2011-08-14-16,Weighted back projection,IMOD,rawdata/11aug14_0018.st -cwl2011-08-14-17,Weighted back projection,IMOD,rawdata/11aug14_0019.st -cwl2011-08-14-18,Weighted back projection,IMOD,rawdata/11aug14_0021.st -cwl2011-08-14-19,Weighted back projection,IMOD,rawdata/11aug14_0023preali.st -cwl2011-08-14-20,Weighted back projection,IMOD,rawdata/11aug14_0024.st -cwl2011-08-14-21,Weighted back projection,IMOD,rawdata/11aug16_.st +run_name,ts-tilt_alignment_software,ts-tilt_series_path +cwl2011-08-14-1,IMOD,rawdata/11aug14_0001.st +cwl2011-08-14-2,IMOD,rawdata/11aug14_1_C88_1.st +cwl2011-08-14-3,IMOD,rawdata/11aug14_0002.st +cwl2011-08-14-4,IMOD,rawdata/11aug14_2_C88_1.st +cwl2011-08-14-5,IMOD,rawdata/11aug14_0003_ns.st +cwl2011-08-14-6,IMOD,rawdata/11aug14_3_C89_3.st +cwl2011-08-14-7,IMOD,rawdata/11aug14_0005_ns.st +cwl2011-08-14-8,IMOD,rawdata/11aug14_0008_ns.st +cwl2011-08-14-9,IMOD,rawdata/11aug14_0009.st +cwl2011-08-14-10,IMOD,rawdata/11aug14_0011.st +cwl2011-08-14-11,IMOD,rawdata/11aug14_0012.st +cwl2011-08-14-12,IMOD,rawdata/11aug14_0013_ns.st +cwl2011-08-14-13,IMOD,rawdata/11aug14_0014.st +cwl2011-08-14-14,IMOD;IMOD,rawdata/11aug14_0015.st +cwl2011-08-14-15,IMOD,rawdata/11aug14_0016.st +cwl2011-08-14-16,IMOD,rawdata/11aug14_0018.st +cwl2011-08-14-17,IMOD,rawdata/11aug14_0019.st +cwl2011-08-14-18,IMOD,rawdata/11aug14_0021.st +cwl2011-08-14-19,IMOD,rawdata/11aug14_0023preali.st +cwl2011-08-14-20,IMOD,rawdata/11aug14_0024.st +cwl2011-08-14-21,IMOD,rawdata/11aug16_.st diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10248.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10248.csv index 5f9358d48..c708e63e9 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10248.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10248.csv @@ -1,33 +1,33 @@ -run_name,ts-tilt_alignment_software,ts-tilt_series_path -etl2011-07-05-1,RAPTOR,rawdata/target20016.mrc -etl2011-07-05-2,RAPTOR,rawdata/target20017.mrc -etl2011-07-05-3,RAPTOR,rawdata/target30001.mrc -etl2011-07-05-4,RAPTOR,rawdata/target30002.mrc -etl2011-07-05-5,RAPTOR,rawdata/target30003.mrc -etl2011-07-05-6,RAPTOR,rawdata/target30004.mrc -etl2011-07-05-7,RAPTOR,rawdata/target30005.mrc -etl2011-07-05-8,RAPTOR,rawdata/target30006.mrc -etl2011-07-05-9,RAPTOR,rawdata/target30007.mrc -etl2011-07-05-10,RAPTOR,rawdata/target30008.mrc -etl2011-07-05-11,RAPTOR,rawdata/target30009.mrc -etl2011-07-05-12,RAPTOR,rawdata/target30010.mrc -etl2011-07-05-13,RAPTOR,rawdata/target30011.mrc -etl2011-07-05-14,RAPTOR,rawdata/target30012.mrc -etl2011-07-05-15,RAPTOR,rawdata/target30013.mrc -etl2011-07-05-16,RAPTOR,rawdata/target10001.mrc -etl2011-07-05-17,RAPTOR,rawdata/target20008.mrc -etl2011-07-05-18,RAPTOR;RAPTOR,rawdata/target20009.mrc -etl2011-07-05-19,RAPTOR,rawdata/target20010.mrc -etl2011-07-05-20,RAPTOR,rawdata/target20011.mrc -etl2011-07-05-21,RAPTOR,rawdata/target20012.mrc -etl2011-07-05-22,RAPTOR,rawdata/target20013.mrc -etl2011-07-05-23,RAPTOR,rawdata/target20014.mrc -etl2011-07-05-24,RAPTOR,rawdata/target20015.mrc -etl2011-07-05-25,RAPTOR,rawdata/target10002.mrc -etl2011-07-05-26,RAPTOR,rawdata/target20001.mrc -etl2011-07-05-27,RAPTOR,rawdata/target20002.mrc -etl2011-07-05-28,RAPTOR,rawdata/target20003.mrc -etl2011-07-05-29,RAPTOR,rawdata/target20004.mrc -etl2011-07-05-30,RAPTOR,rawdata/target20005.mrc -etl2011-07-05-31,RAPTOR,rawdata/target20006.mrc -etl2011-07-05-32,RAPTOR,rawdata/target20007.mrc +run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path +etl2011-07-05-1,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20016.mrc +etl2011-07-05-2,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20017.mrc +etl2011-07-05-3,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30001.mrc +etl2011-07-05-4,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30002.mrc +etl2011-07-05-5,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30003.mrc +etl2011-07-05-6,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30004.mrc +etl2011-07-05-7,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30005.mrc +etl2011-07-05-8,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30006.mrc +etl2011-07-05-9,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30007.mrc +etl2011-07-05-10,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30008.mrc +etl2011-07-05-11,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30009.mrc +etl2011-07-05-12,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30010.mrc +etl2011-07-05-13,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30011.mrc +etl2011-07-05-14,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30012.mrc +etl2011-07-05-15,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target30013.mrc +etl2011-07-05-16,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target10001.mrc +etl2011-07-05-17,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20008.mrc +etl2011-07-05-18,SIRT,19.0,RAPTOR;RAPTOR,rawdata/target20009.mrc +etl2011-07-05-19,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20010.mrc +etl2011-07-05-20,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20011.mrc +etl2011-07-05-21,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20012.mrc +etl2011-07-05-22,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20013.mrc +etl2011-07-05-23,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20014.mrc +etl2011-07-05-24,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20015.mrc +etl2011-07-05-25,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target10002.mrc +etl2011-07-05-26,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20001.mrc +etl2011-07-05-27,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20002.mrc +etl2011-07-05-28,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20003.mrc +etl2011-07-05-29,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20004.mrc +etl2011-07-05-30,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20005.mrc +etl2011-07-05-31,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20006.mrc +etl2011-07-05-32,Weighted back projection,18.919999999999998,RAPTOR,rawdata/target20007.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10261.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10261.csv index ade09ab01..259dffea6 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10261.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10261.csv @@ -1,46 +1,46 @@ -run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -aba2013-12-24-1,['RAPTOR'],FIDUCIAL,SIRT,16.145,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0001.mrc -aba2013-12-24-2,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0002.mrc -aba2013-12-24-4,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0004.mrc -aba2013-12-24-5,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0005.mrc -aba2013-12-24-6,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0006.mrc -aba2013-12-24-7,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0007.mrc -aba2013-12-24-8,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0008.mrc -aba2013-12-24-10,['RAPTOR'],FIDUCIAL,SIRT,16.145,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0010.mrc -aba2013-12-24-11,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0011.mrc -aba2013-12-24-12,['RAPTOR'],FIDUCIAL,SIRT,16.145,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0012.mrc -aba2013-12-24-13,['RAPTOR'],FIDUCIAL,SIRT,16.145,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0013.mrc -aba2013-12-24-14,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0014.mrc -aba2013-12-24-15,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0015.mrc -aba2013-12-24-16,['RAPTOR'],FIDUCIAL,SIRT,16.145,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0016.mrc -aba2013-12-24-17,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0017.mrc -aba2013-12-24-18,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0018.mrc -aba2013-12-24-19,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0019.mrc -aba2013-12-24-20,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0020.mrc -aba2013-12-24-21,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/BB120VibrioHWT0021.mrc -aba2013-12-25-1,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0001.mrc -aba2013-12-25-2,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0002.mrc -aba2013-12-25-3,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0003.mrc -aba2013-12-25-4,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0004.mrc -aba2013-12-25-5,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0005.mrc -aba2013-12-25-6,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0006.mrc -aba2013-12-25-7,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0007.mrc -aba2013-12-25-8,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0008.mrc -aba2013-12-25-9,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0009.mrc -aba2013-12-25-10,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0010.mrc -aba2013-12-25-11,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0011.mrc -aba2013-12-25-12,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0012.mrc -aba2013-12-25-13,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0013.mrc -aba2013-12-25-14,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0014.mrc -aba2013-12-25-15,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0015.mrc -aba2013-12-25-16,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0016.mrc -aba2013-12-25-17,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0017.mrc -aba2013-12-25-18,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0018.mrc -aba2013-12-25-19,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0019.mrc -aba2013-12-25-20,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0020.mrc -aba2013-12-25-21,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0021.mrc -aba2013-12-25-22,['autoPatch'],NON_FIDUCIAL,Weighted back projection,16.145,autoPatch,rawdata/VibrioHBB120delta0022.mrc -aba2013-12-25-23,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0023.mrc -aba2013-12-25-24,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0024.mrc -aba2013-12-25-25,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0025.mrc -aba2013-12-25-26,['RAPTOR'],FIDUCIAL,Weighted back projection,16.145,RAPTOR,rawdata/VibrioHBB120delta0026.mrc +run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-reconstruction_method,ts-tilt_alignment_software,ts-tilt_series_path +aba2013-12-24-1,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0001.mrc +aba2013-12-24-2,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0002.mrc +aba2013-12-24-4,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0004.mrc +aba2013-12-24-5,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0005.mrc +aba2013-12-24-6,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0006.mrc +aba2013-12-24-7,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0007.mrc +aba2013-12-24-8,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0008.mrc +aba2013-12-24-10,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0010.mrc +aba2013-12-24-11,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0011.mrc +aba2013-12-24-12,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0012.mrc +aba2013-12-24-13,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0013.mrc +aba2013-12-24-14,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0014.mrc +aba2013-12-24-15,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0015.mrc +aba2013-12-24-16,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0016.mrc +aba2013-12-24-17,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0017.mrc +aba2013-12-24-18,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0018.mrc +aba2013-12-24-19,['RAPTOR'],FIDUCIAL,SIRT,RAPTOR;RAPTOR,rawdata/BB120VibrioHWT0019.mrc +aba2013-12-24-20,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0020.mrc +aba2013-12-24-21,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/BB120VibrioHWT0021.mrc +aba2013-12-25-1,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0001.mrc +aba2013-12-25-2,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0002.mrc +aba2013-12-25-3,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0003.mrc +aba2013-12-25-4,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0004.mrc +aba2013-12-25-5,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0005.mrc +aba2013-12-25-6,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0006.mrc +aba2013-12-25-7,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0007.mrc +aba2013-12-25-8,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0008.mrc +aba2013-12-25-9,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0009.mrc +aba2013-12-25-10,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0010.mrc +aba2013-12-25-11,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0011.mrc +aba2013-12-25-12,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0012.mrc +aba2013-12-25-13,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0013.mrc +aba2013-12-25-14,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0014.mrc +aba2013-12-25-15,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0015.mrc +aba2013-12-25-16,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0016.mrc +aba2013-12-25-17,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0017.mrc +aba2013-12-25-18,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0018.mrc +aba2013-12-25-19,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0019.mrc +aba2013-12-25-20,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0020.mrc +aba2013-12-25-21,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0021.mrc +aba2013-12-25-22,['autoPatch'],NON_FIDUCIAL,Weighted back projection,autoPatch,rawdata/VibrioHBB120delta0022.mrc +aba2013-12-25-23,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0023.mrc +aba2013-12-25-24,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0024.mrc +aba2013-12-25-25,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0025.mrc +aba2013-12-25-26,['RAPTOR'],FIDUCIAL,Weighted back projection,RAPTOR,rawdata/VibrioHBB120delta0026.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10263.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10263.csv index 0cd1a0a7d..f46a718d3 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10263.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10263.csv @@ -11,7 +11,7 @@ aba2014-05-05-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.05900000000 aba2014-05-05-10,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR,rawdata/VibrioDelta123May0010.mrc,4 aba2014-05-05-11,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR,rawdata/VibrioDelta123May0011.mrc,4 aba2014-05-05-12,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR,rawdata/VibrioDelta123May0012.mrc,4 -aba2014-05-05-13,['RAPTOR'],FIDUCIAL,SIRT,IMOD,13.059000000000001,RAPTOR;RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioDelta123May0013.mrc,4 +aba2014-05-05-13,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR;RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioDelta123May0013.mrc,4 aba2014-05-05-14,,NON_FIDUCIAL,None,None,,,rawdata/VibrioDelta123May0014.mrc,1 aba2014-05-05-15,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR,rawdata/VibrioDelta123May0015.mrc,4 aba2014-05-05-16,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,13.059000000000001,RAPTOR,rawdata/VibrioDelta123May0016.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10268.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10268.csv index 503474172..ff6faf2b1 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10268.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10268.csv @@ -1,28 +1,28 @@ -run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -aba2014-02-21-1,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0001.mrc -aba2014-02-21-2,['RAPTOR'],FIDUCIAL,Weighted back projection,6.529,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0002.mrc -aba2014-02-21-3,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0003.mrc -aba2014-02-21-4,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0004.mrc -aba2014-02-21-5,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0005.mrc -aba2014-02-21-6,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0006.mrc -aba2014-02-21-7,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0007.mrc -aba2014-02-21-8,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0008.mrc -aba2014-02-21-9,['autoPatch'],NON_FIDUCIAL,Weighted back projection,13.059000000000001,autoPatch,rawdata/VibrioYiWeiStyle0009.mrc -aba2014-02-21-10,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0010.mrc -aba2014-02-21-11,['RAPTOR'],FIDUCIAL,Weighted back projection,6.529,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0011.mrc -aba2014-02-21-12,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0012.mrc -aba2014-02-21-13,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0013.mrc -aba2014-02-21-14,['RAPTOR'],FIDUCIAL,Weighted back projection,6.529,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0014.mrc -aba2014-02-21-15,['RAPTOR'],FIDUCIAL,SIRT,1.0,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0015.mrc -aba2014-02-21-16,['RAPTOR'],FIDUCIAL,Weighted back projection,6.529,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0016.mrc -aba2014-02-21-17,['RAPTOR'],FIDUCIAL,SIRT,13.059000000000001,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0017.mrc -aba2014-02-21-18,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0018.mrc -aba2014-02-21-19,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0019.mrc -aba2014-02-21-20,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0020.mrc -aba2014-02-21-21,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0021.mrc -aba2014-02-21-22,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0022.mrc -aba2014-02-21-23,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0023.mrc -aba2014-02-21-24,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0024.mrc -aba2014-02-21-25,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0025.mrc -aba2014-02-21-26,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0026.mrc -aba2014-02-21-27,['RAPTOR'],FIDUCIAL,Weighted back projection,13.059000000000001,RAPTOR,rawdata/VibrioYiWeiStyle0027.mrc +run_name,tomo-align_softwares,tomo-fiducial_alignment_status,ts-tilt_alignment_software,ts-tilt_series_path +aba2014-02-21-1,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0001.mrc +aba2014-02-21-2,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0002.mrc +aba2014-02-21-3,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0003.mrc +aba2014-02-21-4,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0004.mrc +aba2014-02-21-5,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0005.mrc +aba2014-02-21-6,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0006.mrc +aba2014-02-21-7,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0007.mrc +aba2014-02-21-8,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0008.mrc +aba2014-02-21-9,['autoPatch'],NON_FIDUCIAL,autoPatch,rawdata/VibrioYiWeiStyle0009.mrc +aba2014-02-21-10,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0010.mrc +aba2014-02-21-11,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0011.mrc +aba2014-02-21-12,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0012.mrc +aba2014-02-21-13,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0013.mrc +aba2014-02-21-14,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0014.mrc +aba2014-02-21-15,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0015.mrc +aba2014-02-21-16,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0016.mrc +aba2014-02-21-17,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioYiWeiStyle0017.mrc +aba2014-02-21-18,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0018.mrc +aba2014-02-21-19,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0019.mrc +aba2014-02-21-20,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0020.mrc +aba2014-02-21-21,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0021.mrc +aba2014-02-21-22,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0022.mrc +aba2014-02-21-23,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0023.mrc +aba2014-02-21-24,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0024.mrc +aba2014-02-21-25,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0025.mrc +aba2014-02-21-26,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0026.mrc +aba2014-02-21-27,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioYiWeiStyle0027.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10276.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10276.csv index 5b6bac6cb..fea2adf3f 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10276.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10276.csv @@ -1,32 +1,32 @@ -run_name,tomo-align_softwares,tomo-fiducial_alignment_status,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -aba2014-04-10-3,['RAPTOR'],FIDUCIAL,6.529,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioDeltaA20001.mrc -aba2014-04-10-4,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20002.mrc -aba2014-04-10-5,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20003.mrc -aba2014-04-10-6,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20004.mrc -aba2014-04-10-7,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20005.mrc -aba2014-04-10-8,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20006.mrc -aba2014-04-10-9,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20007.mrc -aba2014-04-10-10,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20008.mrc -aba2014-04-10-11,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20009.mrc -aba2014-04-10-12,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20010.mrc -aba2014-04-10-13,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20011.mrc -aba2014-04-10-14,['autoPatch'],NON_FIDUCIAL,13.059000000000001,autoPatch,rawdata/VibrioDeltaA20012.mrc -aba2014-04-10-15,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20013.mrc -aba2014-04-10-16,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20014.mrc -aba2014-04-10-17,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20015.mrc -aba2014-04-10-18,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20016.mrc -aba2014-04-10-19,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20017.mrc -aba2014-04-10-20,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20018.mrc -aba2014-04-10-21,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20019.mrc -aba2014-04-10-22,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20020.mrc -aba2014-04-10-23,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20021.mrc -aba2014-04-10-24,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20022.mrc -aba2014-04-10-25,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20023.mrc -aba2014-04-10-26,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20024.mrc -aba2014-04-10-27,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20025.mrc -aba2014-04-10-28,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20026.mrc -aba2014-04-10-29,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20027.mrc -aba2014-04-10-30,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20028.mrc -aba2014-04-10-31,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20029.mrc -aba2014-04-10-32,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20030.mrc -aba2014-04-10-33,['RAPTOR'],FIDUCIAL,13.059000000000001,RAPTOR,rawdata/VibrioDeltaA20031.mrc +run_name,tomo-align_softwares,tomo-fiducial_alignment_status,ts-tilt_alignment_software,ts-tilt_series_path +aba2014-04-10-3,['RAPTOR'],FIDUCIAL,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/VibrioDeltaA20001.mrc +aba2014-04-10-4,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20002.mrc +aba2014-04-10-5,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20003.mrc +aba2014-04-10-6,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20004.mrc +aba2014-04-10-7,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20005.mrc +aba2014-04-10-8,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20006.mrc +aba2014-04-10-9,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20007.mrc +aba2014-04-10-10,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20008.mrc +aba2014-04-10-11,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20009.mrc +aba2014-04-10-12,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20010.mrc +aba2014-04-10-13,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20011.mrc +aba2014-04-10-14,['autoPatch'],NON_FIDUCIAL,autoPatch,rawdata/VibrioDeltaA20012.mrc +aba2014-04-10-15,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20013.mrc +aba2014-04-10-16,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20014.mrc +aba2014-04-10-17,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20015.mrc +aba2014-04-10-18,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20016.mrc +aba2014-04-10-19,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20017.mrc +aba2014-04-10-20,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20018.mrc +aba2014-04-10-21,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20019.mrc +aba2014-04-10-22,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20020.mrc +aba2014-04-10-23,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20021.mrc +aba2014-04-10-24,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20022.mrc +aba2014-04-10-25,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20023.mrc +aba2014-04-10-26,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20024.mrc +aba2014-04-10-27,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20025.mrc +aba2014-04-10-28,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20026.mrc +aba2014-04-10-29,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20027.mrc +aba2014-04-10-30,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20028.mrc +aba2014-04-10-31,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20029.mrc +aba2014-04-10-32,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20030.mrc +aba2014-04-10-33,['RAPTOR'],FIDUCIAL,RAPTOR,rawdata/VibrioDeltaA20031.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10288.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10288.csv index 0536be8b4..a3cfbce8b 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10288.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10288.csv @@ -3,9 +3,9 @@ zyh2009-06-04-1,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPT zyh2009-06-04-2,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_002.ali,4,2.0,150.0 zyh2009-06-04-3,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_003.ali,4,1.9692307692307693,150.0 zyh2009-06-04-4,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_004.ali,4,1.9692307692307693,150.0 -zyh2009-06-04-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999618530273,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_005.ali,4,1.9692307692307693,150.0 -zyh2009-06-04-6,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999501753827,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_006.ali,4,1.9692307692307693,150.0 -zyh2009-06-04-7,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999373998398,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_007.ali,4,1.9692307692307693,150.0 +zyh2009-06-04-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_005.ali,4,1.9692307692307693,150.0 +zyh2009-06-04-6,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_006.ali,4,1.9692307692307693,150.0 +zyh2009-06-04-7,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_007.ali,4,1.9692307692307693,150.0 zyh2009-06-04-8,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_008.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_009.ali,4,1.9692307692307693,150.0 zyh2009-06-04-10,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_010.mrc,1,1.9692307692307693,150.0 @@ -19,7 +19,7 @@ zyh2009-06-04-17,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_029.mrc,1,1 zyh2009-06-04-18,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_029.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-19,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_030.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-20,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_031.ali,4,1.9692307692307693,150.0 -zyh2009-06-04-21,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999139592511,10.4,RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_032.ali,4,1.9692307692307693,150.0 +zyh2009-06-04-21,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_032.ali,4,1.9692307692307693,150.0 zyh2009-06-04-23,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_034.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-24,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_035.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-25,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_036.mrc,1,1.9692307692307693,150.0 @@ -28,7 +28,7 @@ zyh2009-06-04-27,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_038.mrc,1,1 zyh2009-06-04-28,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_039.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-29,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_040.ali,4,1.9692307692307693,150.0 zyh2009-06-04-30,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_041.mrc,1,1.9692307692307693,150.0 -zyh2009-06-04-31,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999533489252,10.4,RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_042.ali,4,1.9692307692307693,150.0 +zyh2009-06-04-31,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR;RAPTOR,rawdata/09jun04a_756d_042.ali,4,1.9692307692307693,150.0 zyh2009-06-04-32,,NON_FIDUCIAL,None,None,,5.2,,rawdata/09jun04a_756d_043.mrc,1,1.9692307692307693,150.0 zyh2009-06-04-33,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_044.ali,4,1.9692307692307693,150.0 zyh2009-06-04-34,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun04a_756d_045.ali,4,1.9692307692307693,150.0 @@ -47,7 +47,7 @@ zyh2009-06-13-4,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPT zyh2009-06-13-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun13a_CHMP1B_006.ali,4,1.9692307692307693,130.0 zyh2009-06-13-6,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR,rawdata/09jun13a_CHMP1B_007.ali,4,1.9692307692307693,130.0 zyh2009-06-13-7,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun13a_CHMP1B_009.ali,4,2.098360655737705,130.0 -zyh2009-06-13-8,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.399999664411512,10.4,RAPTOR;RAPTOR,rawdata/09jun13a_CHMP1B_010.ali,4,2.245614035087719,130.0 +zyh2009-06-13-8,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR,rawdata/09jun13a_CHMP1B_010.ali,4,2.245614035087719,130.0 zyh2009-06-13-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun13a_CHMP1B_011.ali,4,2.206896551724138,130.0 zyh2009-06-13-10,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR;RAPTOR,rawdata/09jun13a_CHMP1B_012.ali,4,2.206896551724138,130.0 zyh2009-06-13-11,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,10.4,10.4,RAPTOR,rawdata/09jun13a_CHMP1B_015.ali,4,1.9692307692307693,130.0 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10289.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10289.csv index 9ccd751b1..80624dcd3 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10289.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10289.csv @@ -1,35 +1,35 @@ -run_name,tomo-reconstruction_method,ts-tilt_alignment_software,ts-tilt_series_path -jsa2010-01-01-1,Weighted back projection,RAPTOR,rawdata/10jan01a_B945a_001.mrc -jsa2010-01-01-2,Weighted back projection,RAPTOR,rawdata/10jan01a_B945a_002.mrc -jsa2010-01-01-3,Weighted back projection,RAPTOR,rawdata/10jan01a_B945a_003.mrc -jsa2010-01-01-4,Weighted back projection,RAPTOR,rawdata/10jan01a_B945a_004.mrc -jsa2010-01-01-5,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_001.mrc -jsa2010-01-01-6,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_002.mrc -jsa2010-01-01-7,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_005.mrc -jsa2010-01-01-8,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_006.mrc -jsa2010-01-01-9,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_007.mrc -jsa2010-01-01-10,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_008.mrc -jsa2010-01-01-11,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_013.mrc -jsa2010-01-01-12,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_014.mrc -jsa2010-01-01-13,SIRT,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_015.mrc -jsa2010-01-01-14,Weighted back projection,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_017.mrc -jsa2010-01-01-15,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_020.mrc -jsa2010-01-01-16,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_021.mrc -jsa2010-01-01-17,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_022.mrc -jsa2010-01-01-18,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_023.mrc -jsa2010-01-01-19,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_027.mrc -jsa2010-01-01-20,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_028.mrc -jsa2010-01-01-21,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_029.mrc -jsa2010-01-01-22,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_030.mrc -jsa2010-01-01-23,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_031.mrc -jsa2010-01-01-24,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_032.mrc -jsa2010-01-01-25,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_033.mrc -jsa2010-01-01-26,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_036.mrc -jsa2010-01-01-27,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_038.mrc -jsa2010-01-01-28,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_039.mrc -jsa2010-01-01-29,Weighted back projection,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_040.mrc -jsa2010-01-01-30,Weighted back projection,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_041.mrc -jsa2010-01-01-31,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_042.mrc -jsa2010-01-01-32,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_043.mrc -jsa2010-01-01-33,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_045.mrc -jsa2010-01-01-34,Weighted back projection,RAPTOR,rawdata/10jan01b_B945b_046.mrc +run_name,ts-tilt_alignment_software,ts-tilt_series_path +jsa2010-01-01-1,RAPTOR,rawdata/10jan01a_B945a_001.mrc +jsa2010-01-01-2,RAPTOR,rawdata/10jan01a_B945a_002.mrc +jsa2010-01-01-3,RAPTOR,rawdata/10jan01a_B945a_003.mrc +jsa2010-01-01-4,RAPTOR,rawdata/10jan01a_B945a_004.mrc +jsa2010-01-01-5,RAPTOR,rawdata/10jan01b_B945b_001.mrc +jsa2010-01-01-6,RAPTOR,rawdata/10jan01b_B945b_002.mrc +jsa2010-01-01-7,RAPTOR,rawdata/10jan01b_B945b_005.mrc +jsa2010-01-01-8,RAPTOR,rawdata/10jan01b_B945b_006.mrc +jsa2010-01-01-9,RAPTOR,rawdata/10jan01b_B945b_007.mrc +jsa2010-01-01-10,RAPTOR,rawdata/10jan01b_B945b_008.mrc +jsa2010-01-01-11,RAPTOR,rawdata/10jan01b_B945b_013.mrc +jsa2010-01-01-12,RAPTOR,rawdata/10jan01b_B945b_014.mrc +jsa2010-01-01-13,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_015.mrc +jsa2010-01-01-14,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_017.mrc +jsa2010-01-01-15,RAPTOR,rawdata/10jan01b_B945b_020.mrc +jsa2010-01-01-16,RAPTOR,rawdata/10jan01b_B945b_021.mrc +jsa2010-01-01-17,RAPTOR,rawdata/10jan01b_B945b_022.mrc +jsa2010-01-01-18,RAPTOR,rawdata/10jan01b_B945b_023.mrc +jsa2010-01-01-19,RAPTOR,rawdata/10jan01b_B945b_027.mrc +jsa2010-01-01-20,RAPTOR,rawdata/10jan01b_B945b_028.mrc +jsa2010-01-01-21,RAPTOR,rawdata/10jan01b_B945b_029.mrc +jsa2010-01-01-22,RAPTOR,rawdata/10jan01b_B945b_030.mrc +jsa2010-01-01-23,RAPTOR,rawdata/10jan01b_B945b_031.mrc +jsa2010-01-01-24,RAPTOR,rawdata/10jan01b_B945b_032.mrc +jsa2010-01-01-25,RAPTOR,rawdata/10jan01b_B945b_033.mrc +jsa2010-01-01-26,RAPTOR,rawdata/10jan01b_B945b_036.mrc +jsa2010-01-01-27,RAPTOR,rawdata/10jan01b_B945b_038.mrc +jsa2010-01-01-28,RAPTOR,rawdata/10jan01b_B945b_039.mrc +jsa2010-01-01-29,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_040.mrc +jsa2010-01-01-30,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan01b_B945b_041.mrc +jsa2010-01-01-31,RAPTOR,rawdata/10jan01b_B945b_042.mrc +jsa2010-01-01-32,RAPTOR,rawdata/10jan01b_B945b_043.mrc +jsa2010-01-01-33,RAPTOR,rawdata/10jan01b_B945b_045.mrc +jsa2010-01-01-34,RAPTOR,rawdata/10jan01b_B945b_046.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10290.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10290.csv index 486c8cac6..b1a3121c1 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10290.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10290.csv @@ -1,36 +1,36 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -jsa2009-12-31-1,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_001.mrc -jsa2009-12-31-2,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_002.mrc -jsa2009-12-31-3,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_003.mrc -jsa2009-12-31-4,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_004.mrc -jsa2009-12-31-5,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_005.mrc -jsa2009-12-31-6,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_006.mrc -jsa2009-12-31-7,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_007.mrc -jsa2009-12-31-8,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_008.mrc -jsa2009-12-31-9,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_009.mrc -jsa2009-12-31-10,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_010.mrc -jsa2009-12-31-11,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_011.mrc -jsa2009-12-31-12,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_012.mrc -jsa2009-12-31-13,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_013.mrc -jsa2009-12-31-14,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_014.mrc -jsa2009-12-31-15,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_015.mrc -jsa2009-12-31-16,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_016.mrc -jsa2009-12-31-17,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_017.mrc -jsa2009-12-31-18,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_018.mrc -jsa2009-12-31-19,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_019.mrc -jsa2009-12-31-20,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_020.mrc -jsa2009-12-31-21,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_023.mrc -jsa2009-12-31-22,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_024.mrc -jsa2009-12-31-23,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_025.mrc -jsa2009-12-31-24,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_026.mrc -jsa2009-12-31-25,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_027.mrc -jsa2009-12-31-26,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_028.mrc -jsa2009-12-31-27,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_029.mrc -jsa2009-12-31-28,Weighted back projection,15.64,RAPTOR,rawdata/09dec31a_B864b_030.mrc -jsa2009-12-31-29,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_031.mrc -jsa2009-12-31-30,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_033.mrc -jsa2009-12-31-31,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_034.mrc -jsa2009-12-31-32,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_035.mrc -jsa2009-12-31-33,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_036.mrc -jsa2009-12-31-34,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_037.mrc -jsa2009-12-31-35,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_038.mrc +run_name,ts-tilt_alignment_software,ts-tilt_series_path +jsa2009-12-31-1,RAPTOR,rawdata/09dec31a_B864b_001.mrc +jsa2009-12-31-2,RAPTOR,rawdata/09dec31a_B864b_002.mrc +jsa2009-12-31-3,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_003.mrc +jsa2009-12-31-4,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_004.mrc +jsa2009-12-31-5,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_005.mrc +jsa2009-12-31-6,RAPTOR,rawdata/09dec31a_B864b_006.mrc +jsa2009-12-31-7,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_007.mrc +jsa2009-12-31-8,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_008.mrc +jsa2009-12-31-9,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_009.mrc +jsa2009-12-31-10,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_010.mrc +jsa2009-12-31-11,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_011.mrc +jsa2009-12-31-12,RAPTOR,rawdata/09dec31a_B864b_012.mrc +jsa2009-12-31-13,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_013.mrc +jsa2009-12-31-14,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_014.mrc +jsa2009-12-31-15,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_015.mrc +jsa2009-12-31-16,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_016.mrc +jsa2009-12-31-17,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_017.mrc +jsa2009-12-31-18,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_018.mrc +jsa2009-12-31-19,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_019.mrc +jsa2009-12-31-20,RAPTOR,rawdata/09dec31a_B864b_020.mrc +jsa2009-12-31-21,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_023.mrc +jsa2009-12-31-22,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_024.mrc +jsa2009-12-31-23,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_025.mrc +jsa2009-12-31-24,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_026.mrc +jsa2009-12-31-25,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_027.mrc +jsa2009-12-31-26,RAPTOR,rawdata/09dec31a_B864b_028.mrc +jsa2009-12-31-27,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_029.mrc +jsa2009-12-31-28,RAPTOR,rawdata/09dec31a_B864b_030.mrc +jsa2009-12-31-29,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_031.mrc +jsa2009-12-31-30,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_033.mrc +jsa2009-12-31-31,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_034.mrc +jsa2009-12-31-32,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_035.mrc +jsa2009-12-31-33,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_036.mrc +jsa2009-12-31-34,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_037.mrc +jsa2009-12-31-35,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec31a_B864b_038.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10291.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10291.csv index ce7d1bedf..d778aeecd 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10291.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10291.csv @@ -1,34 +1,34 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -jsa2009-10-15-1,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_002.mrc -jsa2009-10-15-2,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_003.mrc -jsa2009-10-15-3,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_004.mrc -jsa2009-10-15-4,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_005.mrc -jsa2009-10-15-5,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_006.mrc -jsa2009-10-15-6,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_007.mrc -jsa2009-10-15-7,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_008.mrc -jsa2009-10-15-8,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_009.mrc -jsa2009-10-15-9,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_011.mrc -jsa2009-10-15-10,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_012.mrc -jsa2009-10-15-11,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_013.mrc -jsa2009-10-15-12,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_014.mrc -jsa2009-10-15-13,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_015.mrc -jsa2009-10-15-14,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_016.mrc -jsa2009-10-15-15,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_017.mrc -jsa2009-10-15-16,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_018.mrc -jsa2009-10-15-17,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_019.mrc -jsa2009-10-15-18,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_020.mrc -jsa2009-10-15-19,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_021.mrc -jsa2009-10-15-20,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_022.mrc -jsa2009-10-15-21,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_023.mrc -jsa2009-10-15-22,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_024.mrc -jsa2009-10-15-23,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_025.mrc -jsa2009-10-15-24,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_026.mrc -jsa2009-10-15-25,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_028.mrc -jsa2009-10-15-26,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_029.mrc -jsa2009-10-15-27,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_030.mrc -jsa2009-10-15-28,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_031.mrc -jsa2009-10-15-29,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_032.mrc -jsa2009-10-15-30,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_033.mrc -jsa2009-10-15-31,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_034.mrc -jsa2009-10-15-32,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_035.mrc -jsa2009-10-15-33,Weighted back projection,15.64,RAPTOR,rawdata/09oct15a_Box169C_036.mrc +run_name,ts-tilt_alignment_software,ts-tilt_series_path +jsa2009-10-15-1,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_002.mrc +jsa2009-10-15-2,RAPTOR,rawdata/09oct15a_Box169C_003.mrc +jsa2009-10-15-3,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_004.mrc +jsa2009-10-15-4,RAPTOR,rawdata/09oct15a_Box169C_005.mrc +jsa2009-10-15-5,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_006.mrc +jsa2009-10-15-6,RAPTOR,rawdata/09oct15a_Box169C_007.mrc +jsa2009-10-15-7,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_008.mrc +jsa2009-10-15-8,RAPTOR,rawdata/09oct15a_Box169C_009.mrc +jsa2009-10-15-9,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_011.mrc +jsa2009-10-15-10,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_012.mrc +jsa2009-10-15-11,RAPTOR,rawdata/09oct15a_Box169C_013.mrc +jsa2009-10-15-12,RAPTOR,rawdata/09oct15a_Box169C_014.mrc +jsa2009-10-15-13,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_015.mrc +jsa2009-10-15-14,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_016.mrc +jsa2009-10-15-15,RAPTOR,rawdata/09oct15a_Box169C_017.mrc +jsa2009-10-15-16,RAPTOR,rawdata/09oct15a_Box169C_018.mrc +jsa2009-10-15-17,RAPTOR,rawdata/09oct15a_Box169C_019.mrc +jsa2009-10-15-18,RAPTOR,rawdata/09oct15a_Box169C_020.mrc +jsa2009-10-15-19,RAPTOR,rawdata/09oct15a_Box169C_021.mrc +jsa2009-10-15-20,RAPTOR,rawdata/09oct15a_Box169C_022.mrc +jsa2009-10-15-21,RAPTOR,rawdata/09oct15a_Box169C_023.mrc +jsa2009-10-15-22,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_024.mrc +jsa2009-10-15-23,RAPTOR,rawdata/09oct15a_Box169C_025.mrc +jsa2009-10-15-24,RAPTOR,rawdata/09oct15a_Box169C_026.mrc +jsa2009-10-15-25,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_028.mrc +jsa2009-10-15-26,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_029.mrc +jsa2009-10-15-27,RAPTOR,rawdata/09oct15a_Box169C_030.mrc +jsa2009-10-15-28,RAPTOR,rawdata/09oct15a_Box169C_031.mrc +jsa2009-10-15-29,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct15a_Box169C_032.mrc +jsa2009-10-15-30,RAPTOR,rawdata/09oct15a_Box169C_033.mrc +jsa2009-10-15-31,RAPTOR,rawdata/09oct15a_Box169C_034.mrc +jsa2009-10-15-32,RAPTOR,rawdata/09oct15a_Box169C_035.mrc +jsa2009-10-15-33,RAPTOR,rawdata/09oct15a_Box169C_036.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10292.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10292.csv index 1dd26678a..91c0e04bd 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10292.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10292.csv @@ -1,40 +1,40 @@ -run_name,tomo-reconstruction_method,ts-tilt_alignment_software,ts-tilt_series_path -jsa2010-04-01-1,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_001.mrc -jsa2010-04-01-2,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_002.mrc -jsa2010-04-01-3,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_003.mrc -jsa2010-04-01-4,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_004.mrc -jsa2010-04-01-5,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_005.mrc -jsa2010-04-01-6,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_006.mrc -jsa2010-04-01-7,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_007.mrc -jsa2010-04-01-8,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_008.mrc -jsa2010-04-01-9,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_009.mrc -jsa2010-04-01-10,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_010.mrc -jsa2010-04-01-11,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_011.mrc -jsa2010-04-01-12,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_012.mrc -jsa2010-04-01-13,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_013.mrc -jsa2010-04-01-14,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_014.mrc -jsa2010-04-01-15,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_015.mrc -jsa2010-04-01-16,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_016.mrc -jsa2010-04-01-17,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_017.mrc -jsa2010-04-01-18,Weighted back projection,RAPTOR,rawdata/10apr01a_B718a_018.mrc -jsa2010-04-01-19,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_019.mrc -jsa2010-04-01-20,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_020.mrc -jsa2010-04-01-21,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_021.mrc -jsa2010-04-01-22,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_022.mrc -jsa2010-04-01-23,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_023.mrc -jsa2010-04-01-24,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_024.mrc -jsa2010-04-01-25,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_025.mrc -jsa2010-04-01-26,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_026.mrc -jsa2010-04-01-27,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_028.mrc -jsa2010-04-01-28,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_029.mrc -jsa2010-04-01-29,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_030.mrc -jsa2010-04-01-30,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_033.mrc -jsa2010-04-01-31,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_034.mrc -jsa2010-04-01-32,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_036.mrc -jsa2010-04-01-33,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_037.mrc -jsa2010-04-01-34,SIRT,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_038.mrc -jsa2010-04-01-35,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_039.mrc -jsa2010-04-01-36,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_040.mrc -jsa2010-04-01-37,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_041.mrc -jsa2010-04-01-38,Weighted back projection,RAPTOR,rawdata/10apr01a_B718a_042.mrc -jsa2010-04-01-39,Weighted back projection,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_044.mrc +run_name,ts-tilt_alignment_software,ts-tilt_series_path +jsa2010-04-01-1,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_001.mrc +jsa2010-04-01-2,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_002.mrc +jsa2010-04-01-3,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_003.mrc +jsa2010-04-01-4,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_004.mrc +jsa2010-04-01-5,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_005.mrc +jsa2010-04-01-6,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_006.mrc +jsa2010-04-01-7,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_007.mrc +jsa2010-04-01-8,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_008.mrc +jsa2010-04-01-9,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_009.mrc +jsa2010-04-01-10,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_010.mrc +jsa2010-04-01-11,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_011.mrc +jsa2010-04-01-12,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_012.mrc +jsa2010-04-01-13,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_013.mrc +jsa2010-04-01-14,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_014.mrc +jsa2010-04-01-15,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_015.mrc +jsa2010-04-01-16,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_016.mrc +jsa2010-04-01-17,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_017.mrc +jsa2010-04-01-18,RAPTOR,rawdata/10apr01a_B718a_018.mrc +jsa2010-04-01-19,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_019.mrc +jsa2010-04-01-20,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_020.mrc +jsa2010-04-01-21,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_021.mrc +jsa2010-04-01-22,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_022.mrc +jsa2010-04-01-23,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_023.mrc +jsa2010-04-01-24,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_024.mrc +jsa2010-04-01-25,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_025.mrc +jsa2010-04-01-26,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_026.mrc +jsa2010-04-01-27,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_028.mrc +jsa2010-04-01-28,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_029.mrc +jsa2010-04-01-29,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_030.mrc +jsa2010-04-01-30,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_033.mrc +jsa2010-04-01-31,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_034.mrc +jsa2010-04-01-32,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_036.mrc +jsa2010-04-01-33,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_037.mrc +jsa2010-04-01-34,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_038.mrc +jsa2010-04-01-35,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_039.mrc +jsa2010-04-01-36,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_040.mrc +jsa2010-04-01-37,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_041.mrc +jsa2010-04-01-38,RAPTOR,rawdata/10apr01a_B718a_042.mrc +jsa2010-04-01-39,RAPTOR;RAPTOR,rawdata/10apr01a_B718a_044.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10293.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10293.csv index 871550393..d7cfda032 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10293.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10293.csv @@ -1,5 +1,5 @@ run_name,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -jsa2009-10-16-1,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_001.mrc +jsa2009-10-16-1,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_001.mrc jsa2009-10-16-2,15.64,RAPTOR,rawdata/09oct16a_Box235B_002.mrc jsa2009-10-16-3,15.64,RAPTOR,rawdata/09oct16a_Box235B_003.mrc jsa2009-10-16-4,15.64,RAPTOR,rawdata/09oct16a_Box235B_004.mrc @@ -16,7 +16,7 @@ jsa2009-10-16-14,15.64,RAPTOR,rawdata/09oct16a_Box235B_015.mrc jsa2009-10-16-15,15.64,RAPTOR,rawdata/09oct16a_Box235B_016.mrc jsa2009-10-16-16,15.64,RAPTOR,rawdata/09oct16a_Box235B_018.mrc jsa2009-10-16-17,15.64,RAPTOR,rawdata/09oct16a_Box235B_019.mrc -jsa2009-10-16-18,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_021.mrc +jsa2009-10-16-18,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_021.mrc jsa2009-10-16-19,15.64,RAPTOR,rawdata/09oct16a_Box235B_022.mrc jsa2009-10-16-20,15.64,RAPTOR,rawdata/09oct16a_Box235B_023.mrc jsa2009-10-16-21,15.64,RAPTOR,rawdata/09oct16a_Box235B_024.mrc @@ -26,10 +26,10 @@ jsa2009-10-16-24,15.64,RAPTOR,rawdata/09oct16a_Box235B_028.mrc jsa2009-10-16-25,15.64,RAPTOR,rawdata/09oct16a_Box235B_029.mrc jsa2009-10-16-26,15.64,RAPTOR,rawdata/09oct16a_Box235B_030.mrc jsa2009-10-16-27,15.64,RAPTOR,rawdata/09oct16a_Box235B_031.mrc -jsa2009-10-16-28,15.47999929138322,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_032.mrc +jsa2009-10-16-28,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_032.mrc jsa2009-10-16-29,15.64,RAPTOR,rawdata/09oct16a_Box235B_033.mrc jsa2009-10-16-30,15.64,RAPTOR,rawdata/09oct16a_Box235B_034.mrc -jsa2009-10-16-31,15.479999533961497,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_035.mrc +jsa2009-10-16-31,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct16a_Box235B_035.mrc jsa2009-10-16-32,15.64,RAPTOR,rawdata/09oct16a_Box235B_037.mrc jsa2009-10-16-33,15.64,RAPTOR,rawdata/09oct16a_Box235B_038.mrc jsa2009-10-16-34,15.64,RAPTOR,rawdata/09oct16a_Box235B_039.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10294.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10294.csv index 36f1db580..6d08e9c95 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10294.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10294.csv @@ -3,32 +3,32 @@ jsa2009-12-29-1,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,r jsa2009-12-29-2,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/09dec29a_b613a_002.mrc,4 jsa2009-12-29-3,,NON_FIDUCIAL,None,None,,,rawdata/09dec29a_b613a_003.mrc,1 jsa2009-12-29-4,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/09dec29a_b613a_004.mrc,4 -jsa2009-12-29-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_005.mrc,4 +jsa2009-12-29-5,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_005.mrc,4 jsa2009-12-29-6,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_006.mrc,4 -jsa2009-12-29-7,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_007.mrc,4 -jsa2009-12-29-8,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_008.mrc,4 +jsa2009-12-29-7,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_007.mrc,4 +jsa2009-12-29-8,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_008.mrc,4 jsa2009-12-29-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_009.mrc,4 -jsa2009-12-29-10,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_010.mrc,4 +jsa2009-12-29-10,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_010.mrc,4 jsa2009-12-29-11,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_011.mrc,4 -jsa2009-12-29-12,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_012.mrc,4 +jsa2009-12-29-12,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_012.mrc,4 jsa2009-12-29-13,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_013.mrc,4 -jsa2009-12-29-14,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_014.mrc,4 -jsa2009-12-29-15,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_015.mrc,4 -jsa2009-12-29-16,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_016.mrc,4 -jsa2009-12-29-17,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_017.mrc,4 +jsa2009-12-29-14,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_014.mrc,4 +jsa2009-12-29-15,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_015.mrc,4 +jsa2009-12-29-16,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_016.mrc,4 +jsa2009-12-29-17,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_017.mrc,4 jsa2009-12-29-18,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_018.mrc,4 jsa2009-12-29-19,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/09dec29a_b613a_019.mrc,4 -jsa2009-12-29-20,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_020.mrc,4 +jsa2009-12-29-20,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_020.mrc,4 jsa2009-12-29-21,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_022.mrc,4 jsa2009-12-29-22,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/09dec29a_b613a_023.mrc,4 -jsa2009-12-29-23,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_024.mrc,4 +jsa2009-12-29-23,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_024.mrc,4 jsa2009-12-29-24,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_025.mrc,4 jsa2009-12-29-25,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_026.mrc,4 -jsa2009-12-29-26,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_027.mrc,4 +jsa2009-12-29-26,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_027.mrc,4 jsa2009-12-29-27,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_028.mrc,4 -jsa2009-12-29-28,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_030.mrc,4 -jsa2009-12-29-29,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_031.mrc,4 +jsa2009-12-29-28,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_030.mrc,4 +jsa2009-12-29-29,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_031.mrc,4 jsa2009-12-29-30,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_033.mrc,4 jsa2009-12-29-31,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_036.mrc,4 -jsa2009-12-29-32,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_037.mrc,4 +jsa2009-12-29-32,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_037.mrc,4 jsa2009-12-29-33,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09dec29a_b613a_038.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10295.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10295.csv index 43b062c4c..07b8d0138 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10295.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10295.csv @@ -10,12 +10,12 @@ jsa2010-01-04-8,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,r jsa2010-01-04-9,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_014.mrc,4 jsa2010-01-04-10,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_015.mrc,4 jsa2010-01-04-11,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/10jan04a_B089b_016.mrc,4 -jsa2010-01-04-12,['RAPTOR'],FIDUCIAL,SIRT,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_017.mrc,4 +jsa2010-01-04-12,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_017.mrc,4 jsa2010-01-04-13,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/10jan04a_B089b_018.mrc,4 -jsa2010-01-04-14,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_019.mrc,4 +jsa2010-01-04-14,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_019.mrc,4 jsa2010-01-04-15,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_020.mrc,4 jsa2010-01-04-16,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR,rawdata/10jan04a_B089b_021.mrc,4 -jsa2010-01-04-17,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_022.mrc,4 +jsa2010-01-04-17,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan04a_B089b_022.mrc,4 jsa2010-01-04-18,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.48,RAPTOR,rawdata/10jan04a_B089b_023.mrc,4 jsa2010-01-04-19,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/10jan04a_B089b_024.mrc,4 jsa2010-01-04-20,['RAPTOR'],FIDUCIAL,Weighted back projection,IMOD,15.64,RAPTOR,rawdata/10jan04a_B089b_025.mrc,4 diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10296.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10296.csv index efbc813fe..738b8caec 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10296.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10296.csv @@ -1,66 +1,66 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -jsa2010-01-02-1,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_001.mrc -jsa2010-01-02-2,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_002.mrc -jsa2010-01-02-3,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_003.mrc -jsa2010-01-02-4,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_004.mrc -jsa2010-01-02-5,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_005.mrc -jsa2010-01-02-6,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_006.mrc -jsa2010-01-02-7,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_007.mrc -jsa2010-01-02-8,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_008.mrc -jsa2010-01-02-9,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_009.mrc -jsa2010-01-02-10,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_010.mrc -jsa2010-01-02-11,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_011.mrc -jsa2010-01-02-12,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_012.mrc -jsa2010-01-02-13,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_013.mrc -jsa2010-01-02-14,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_014.mrc -jsa2010-01-02-15,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_016.mrc -jsa2010-01-02-16,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_017.mrc -jsa2010-01-02-17,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_018.mrc -jsa2010-01-02-18,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_019.mrc -jsa2010-01-02-19,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_020.mrc -jsa2010-01-02-20,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_023.mrc -jsa2010-01-02-21,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_024.mrc -jsa2010-01-02-22,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_025.mrc -jsa2010-01-02-23,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_026.mrc -jsa2010-01-02-24,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_027.mrc -jsa2010-01-02-25,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_028.mrc -jsa2010-01-02-26,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_029.mrc -jsa2010-01-02-27,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_031.mrc -jsa2010-01-02-28,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_032.mrc -jsa2010-01-02-29,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_033.mrc -jsa2010-01-02-30,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_034.mrc -jsa2010-01-02-31,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_035.mrc -jsa2010-01-02-32,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_036.mrc -jsa2010-01-02-33,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_037.mrc -jsa2010-01-02-34,Weighted back projection,15.64,RAPTOR,rawdata/10jan02b_B116a_038.mrc -jsa2010-01-02-35,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_039.mrc -jsa2010-01-02-36,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_040.mrc -jsa2010-01-02-37,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_041.mrc -jsa2010-01-02-38,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_042.mrc -jsa2010-01-02-39,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_043.mrc -jsa2010-01-02-40,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_044.mrc -jsa2010-01-02-41,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_045.mrc -jsa2010-01-02-42,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_046.mrc -jsa2010-01-02-43,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_047.mrc -jsa2010-01-02-44,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_048.mrc -jsa2010-01-02-45,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_049.mrc -jsa2010-01-02-46,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_050.mrc -jsa2010-01-02-47,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_051.mrc -jsa2010-01-02-48,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_052.mrc -jsa2010-01-02-49,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_053.mrc -jsa2010-01-02-50,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_054.mrc -jsa2010-01-02-51,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_055.mrc -jsa2010-01-02-52,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_056.mrc -jsa2010-01-02-53,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_057.mrc -jsa2010-01-02-54,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_058.mrc -jsa2010-01-02-55,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_059.mrc -jsa2010-01-02-56,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_060.mrc -jsa2010-01-02-57,Weighted back projection,15.48,RAPTOR,rawdata/10jan02b_B116a_065.mrc -jsa2010-01-02-58,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_066.mrc -jsa2010-01-02-59,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_067.mrc -jsa2010-01-02-60,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_068.mrc -jsa2010-01-02-61,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_070.mrc -jsa2010-01-02-62,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_071.mrc -jsa2010-01-02-63,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_072.mrc -jsa2010-01-02-64,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_073.mrc -jsa2010-01-02-65,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_074.mrc +run_name,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path +jsa2010-01-02-1,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/10jan02b_B116a_001.mrc 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a/ingestion_tools/dataset_configs/gjensen/run_data_map/10297.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10297.csv @@ -1,26 +1,26 @@ -run_name,tomo-reconstruction_method,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path -jsa2009-10-17-1,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_001.mrc -jsa2009-10-17-2,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_002.mrc -jsa2009-10-17-3,Weighted back projection,15.64,RAPTOR,rawdata/09oct17a_Box338B_003.mrc -jsa2009-10-17-4,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_004.mrc -jsa2009-10-17-5,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_005.mrc -jsa2009-10-17-6,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_006.mrc -jsa2009-10-17-7,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_007.mrc -jsa2009-10-17-8,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_008.mrc -jsa2009-10-17-9,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_009.mrc -jsa2009-10-17-10,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_010.mrc -jsa2009-10-17-11,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_011.mrc -jsa2009-10-17-12,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_012.mrc -jsa2009-10-17-13,Weighted back projection,15.48,RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_013.mrc -jsa2009-10-17-14,Weighted back projection,15.48,RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_014.mrc -jsa2009-10-17-15,Weighted back projection,15.48,RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_015.mrc -jsa2009-10-17-16,Weighted back projection,15.48,RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_016.mrc -jsa2009-10-17-17,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_017.mrc -jsa2009-10-17-18,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_018.mrc -jsa2009-10-17-19,Weighted back projection,15.48,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_019.mrc -jsa2009-10-17-20,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_020.mrc -jsa2009-10-17-21,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_021.mrc -jsa2009-10-17-22,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_022.mrc -jsa2009-10-17-23,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_023.mrc -jsa2009-10-17-24,SIRT,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_024.mrc -jsa2009-10-17-25,Weighted back projection,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_025.mrc +run_name,tomo-voxel_spacing,ts-tilt_alignment_software,ts-tilt_series_path +jsa2009-10-17-1,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_001.mrc +jsa2009-10-17-2,15.64,RAPTOR;RAPTOR;RAPTOR,rawdata/09oct17a_Box338B_002.mrc +jsa2009-10-17-3,15.64,RAPTOR,rawdata/09oct17a_Box338B_003.mrc 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b/ingestion_tools/dataset_configs/gjensen/run_data_map/10298.csv @@ -1,34 +1,34 @@ -run_name,tomo-reconstruction_method,ts-tilt_series_path -jsa2010-03-31-1,Weighted back projection,rawdata/10mar31a_B572c_007.mrc -jsa2010-03-31-2,Weighted back projection,rawdata/10mar31a_B572c_008.mrc -jsa2010-03-31-3,Weighted back projection,rawdata/10mar31a_B572c_009.mrc -jsa2010-03-31-4,Weighted back projection,rawdata/10mar31a_B572c_010.mrc -jsa2010-03-31-5,SIRT,rawdata/10mar31a_B572c_011.mrc -jsa2010-03-31-6,SIRT,rawdata/10mar31a_B572c_012.mrc -jsa2010-03-31-7,Weighted back projection,rawdata/10mar31a_B572c_013.mrc -jsa2010-03-31-8,Weighted back projection,rawdata/10mar31a_B572c_014.mrc -jsa2010-03-31-9,SIRT,rawdata/10mar31a_B572c_015.mrc -jsa2010-03-31-10,SIRT,rawdata/10mar31a_B572c_016.mrc -jsa2010-03-31-11,Weighted back projection,rawdata/10mar31a_B572c_017.mrc -jsa2010-03-31-12,Weighted back projection,rawdata/10mar31a_B572c_018.mrc -jsa2010-03-31-13,Weighted back projection,rawdata/10mar31a_B572c_019.mrc -jsa2010-03-31-14,Weighted back projection,rawdata/10mar31a_B572c_020.mrc -jsa2010-03-31-15,SIRT,rawdata/10mar31a_B572c_021.mrc -jsa2010-03-31-16,Weighted back projection,rawdata/10mar31a_B572c_022.mrc -jsa2010-03-31-17,SIRT,rawdata/10mar31a_B572c_023.mrc -jsa2010-03-31-18,SIRT,rawdata/10mar31a_B572c_024.mrc -jsa2010-03-31-19,SIRT,rawdata/10mar31a_B572c_025.mrc -jsa2010-03-31-20,SIRT,rawdata/10mar31a_B572c_026.mrc -jsa2010-03-31-21,Weighted back projection,rawdata/10mar31a_B572c_027.mrc -jsa2010-03-31-22,SIRT,rawdata/10mar31a_B572c_028.mrc -jsa2010-03-31-23,Weighted back projection,rawdata/10mar31a_B572c_030.mrc -jsa2010-03-31-24,Weighted back projection,rawdata/10mar31a_B572c_031.mrc -jsa2010-03-31-25,Weighted back projection,rawdata/10mar31a_B572c_032.mrc -jsa2010-03-31-26,SIRT,rawdata/10mar31a_B572c_033.mrc -jsa2010-03-31-27,Weighted back projection,rawdata/10mar31a_B572c_034.mrc -jsa2010-03-31-28,Weighted back projection,rawdata/10mar31a_B572c_035.mrc -jsa2010-03-31-29,SIRT,rawdata/10mar31a_B572c_036.mrc -jsa2010-03-31-30,Weighted back projection,rawdata/10mar31a_B572c_037.mrc -jsa2010-03-31-31,SIRT,rawdata/10mar31a_B572c_038.mrc -jsa2010-03-31-32,Weighted back projection,rawdata/10mar31a_B572c_039.mrc -jsa2010-03-31-33,SIRT,rawdata/10mar31a_B572c_040.mrc +run_name,ts-tilt_series_path +jsa2010-03-31-1,rawdata/10mar31a_B572c_007.mrc +jsa2010-03-31-2,rawdata/10mar31a_B572c_008.mrc +jsa2010-03-31-3,rawdata/10mar31a_B572c_009.mrc +jsa2010-03-31-4,rawdata/10mar31a_B572c_010.mrc +jsa2010-03-31-5,rawdata/10mar31a_B572c_011.mrc +jsa2010-03-31-6,rawdata/10mar31a_B572c_012.mrc +jsa2010-03-31-7,rawdata/10mar31a_B572c_013.mrc +jsa2010-03-31-8,rawdata/10mar31a_B572c_014.mrc +jsa2010-03-31-9,rawdata/10mar31a_B572c_015.mrc +jsa2010-03-31-10,rawdata/10mar31a_B572c_016.mrc +jsa2010-03-31-11,rawdata/10mar31a_B572c_017.mrc +jsa2010-03-31-12,rawdata/10mar31a_B572c_018.mrc 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+jsa2010-03-31-33,rawdata/10mar31a_B572c_040.mrc diff --git a/ingestion_tools/dataset_configs/gjensen/run_data_map/10299.csv b/ingestion_tools/dataset_configs/gjensen/run_data_map/10299.csv index 42eda0953..828ccc400 100644 --- a/ingestion_tools/dataset_configs/gjensen/run_data_map/10299.csv +++ b/ingestion_tools/dataset_configs/gjensen/run_data_map/10299.csv @@ -1,21 +1,21 @@ -run_name,tomo-reconstruction_method,ts-tilt_series_path -jsa2010-02-21-1,SIRT,rawdata/10feb21a_MP3a_001.mrc -jsa2010-02-21-2,SIRT,rawdata/10feb21a_MP3a_002.mrc -jsa2010-02-21-3,Weighted back projection,rawdata/10feb21a_MP3a_003.mrc -jsa2010-02-21-4,SIRT,rawdata/10feb21a_MP3a_004.mrc -jsa2010-02-21-5,Weighted back projection,rawdata/10feb21a_MP3a_005.mrc -jsa2010-02-21-6,SIRT,rawdata/10feb21a_MP3a_006.mrc -jsa2010-02-21-7,Weighted back projection,rawdata/10feb21a_MP3a_007.mrc -jsa2010-02-21-8,SIRT,rawdata/10feb21a_MP3a_008.mrc -jsa2010-02-21-9,SIRT,rawdata/10feb21a_MP3a_009.mrc -jsa2010-02-21-10,Weighted back projection,rawdata/10feb21a_MP3a_010.mrc -jsa2010-02-21-11,SIRT,rawdata/10feb21a_MP3a_011.mrc -jsa2010-02-21-12,SIRT,rawdata/10feb21a_MP3a_012.mrc -jsa2010-02-21-13,Weighted back projection,rawdata/10feb21a_MP3a_013.mrc -jsa2010-02-21-14,Weighted back projection,rawdata/10feb21a_MP3a_014.mrc -jsa2010-02-21-15,Weighted back projection,rawdata/10feb21a_MP3a_015.mrc -jsa2010-02-21-16,Weighted back projection,rawdata/10feb21a_MP3a_016.mrc -jsa2010-02-21-17,Weighted back projection,rawdata/10feb21a_MP3a_017.mrc -jsa2010-02-21-18,SIRT,rawdata/10feb21a_MP3a_018.mrc -jsa2010-02-21-19,Weighted back projection,rawdata/10feb21a_MP3a_019.mrc -jsa2010-02-21-20,Weighted back projection,rawdata/10feb21a_MP3a_020.mrc +run_name,ts-tilt_series_path +jsa2010-02-21-1,rawdata/10feb21a_MP3a_001.mrc +jsa2010-02-21-2,rawdata/10feb21a_MP3a_002.mrc +jsa2010-02-21-3,rawdata/10feb21a_MP3a_003.mrc +jsa2010-02-21-4,rawdata/10feb21a_MP3a_004.mrc +jsa2010-02-21-5,rawdata/10feb21a_MP3a_005.mrc +jsa2010-02-21-6,rawdata/10feb21a_MP3a_006.mrc +jsa2010-02-21-7,rawdata/10feb21a_MP3a_007.mrc +jsa2010-02-21-8,rawdata/10feb21a_MP3a_008.mrc +jsa2010-02-21-9,rawdata/10feb21a_MP3a_009.mrc +jsa2010-02-21-10,rawdata/10feb21a_MP3a_010.mrc +jsa2010-02-21-11,rawdata/10feb21a_MP3a_011.mrc +jsa2010-02-21-12,rawdata/10feb21a_MP3a_012.mrc +jsa2010-02-21-13,rawdata/10feb21a_MP3a_013.mrc +jsa2010-02-21-14,rawdata/10feb21a_MP3a_014.mrc +jsa2010-02-21-15,rawdata/10feb21a_MP3a_015.mrc +jsa2010-02-21-16,rawdata/10feb21a_MP3a_016.mrc +jsa2010-02-21-17,rawdata/10feb21a_MP3a_017.mrc +jsa2010-02-21-18,rawdata/10feb21a_MP3a_018.mrc +jsa2010-02-21-19,rawdata/10feb21a_MP3a_019.mrc +jsa2010-02-21-20,rawdata/10feb21a_MP3a_020.mrc diff --git a/ingestion_tools/scripts/gjensen_config.py b/ingestion_tools/scripts/gjensen_config.py index 1b52d8022..db0eefe81 100644 --- a/ingestion_tools/scripts/gjensen_config.py +++ b/ingestion_tools/scripts/gjensen_config.py @@ -6,7 +6,7 @@ from collections import defaultdict from copy import deepcopy from functools import partial -from typing import Any, Callable +from typing import Any, Callable, Optional import click import yaml @@ -97,6 +97,16 @@ def to_dataset_config(dataset_id: int, data: dict[str, Any], authors: list[dict[ return config +def get_canonical_tomogram_name(run: dict[str, Any]) -> Optional[str]: + """ + Get name of the tomogram to treat as Canonical when there are multiple tomograms for a run. Use sorting to find + the first tomogram alphabetically. + """ + names = list(run.get("tomograms", {}).keys()) + names.sort() + return next(iter(names), None) + + def to_standardization_config( dataset_id: int, data: dict[str, Any], @@ -112,9 +122,7 @@ def to_standardization_config( run_names.append(run["run_name"]) if len(run["tomograms"]) > 1: run_has_multiple_tomos = True - names = list(run.get("tomograms", {}).keys()) - names.sort() - mapped_tomo_name[run["run_name"]] = next(iter(names), "*") + mapped_tomo_name[run["run_name"]] = get_canonical_tomogram_name(run) or "*" tlt_tomo_path = "{mapped_frame_name}" if run_has_multiple_tomos else "3dimage_*" tomo_path = "{mapped_tomo_name}" if run_has_multiple_tomos else "3dimage_*/*" @@ -222,7 +230,7 @@ def to_template_by_run(templates, run_data_map, prefix: str, path) -> dict[str, return template_metadata -def to_tiltseries(spacing_corrections: dict[str, dict], data: dict[str, Any]) -> dict[str, Any]: +def to_tiltseries(data: dict[str, Any]) -> dict[str, Any]: tilt_series = deepcopy(data["tilt_series"]) microscope = tilt_series.get("microscope", {}) tilt_series["microscope_optical_setup"] = { @@ -238,9 +246,6 @@ def to_tiltseries(spacing_corrections: dict[str, dict], data: dict[str, Any]) -> "max": tilt_series.pop("tilt_range_max"), } - if valid_pixel_spacing := spacing_corrections.get(data["run_name"]): - tilt_series["pixel_spacing"] = valid_pixel_spacing["tilt_series"] - tilt_series["tilt_series_quality"] = 4 if len(data["tomograms"]) else 1 return tilt_series @@ -265,10 +270,10 @@ def normalize_processing(input_processing: str) -> str: def to_tomogram( authors: list[dict[str, Any]], - spacing_corrections: dict[str, dict], data: dict[str, Any], ) -> [dict[str, Any] | Any]: - tomogram = next((deepcopy(val) for val in data["tomograms"].values()), {}) + canonical_tomogram_name = get_canonical_tomogram_name(data) + tomogram = deepcopy(data["tomograms"][canonical_tomogram_name]) if canonical_tomogram_name else {} if len(data["tomograms"].keys()) > 1: print( f'{data["run_name"]} has {len(data["tomograms"].values())} tomograms: ' @@ -287,9 +292,7 @@ def to_tomogram( tomogram["processing"] = normalize_processing(tomogram.get("processing")) - if valid_voxel_spacing := spacing_corrections.get(data["run_name"]): - tomogram["voxel_spacing"] = valid_voxel_spacing["tomogram"] - elif not tomogram.get("voxel_spacing"): + if "voxel_spacing" not in tomogram: tomogram["voxel_spacing"] = None return tomogram @@ -341,15 +344,6 @@ def create(ctx, input_dir: str, output_dir: str) -> None: fs.makedirs(run_frames_map_path) file_paths = fs.glob(os.path.join(input_dir, "[0-9]*.json")) file_paths.sort() - spacing_corrections = {} - with open(os.path.join(input_dir, "spacing_correction.json"), "r") as file: - spacing_corrections = { - entry["run_name"]: { - "tomogram": entry["tomogram_voxel_spacing"], - "tilt_series": entry["tilt_series_pixel_spacing"], - } - for entry in json.load(file) - } for file_path in file_paths: with open(file_path, "r") as file: config = json.load(file) @@ -364,14 +358,14 @@ def create(ctx, input_dir: str, output_dir: str) -> None: dataset_id, val.get("runs"), run_data_map, - partial(to_tiltseries, spacing_corrections), + partial(to_tiltseries), "ts", ), "tomograms": to_config_by_run( dataset_id, val.get("runs"), run_data_map, - partial(to_tomogram, authors, spacing_corrections), + partial(to_tomogram, authors), "tomo", ), "annotations": {},