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Hi, just finished happily a first full run of metawrap :)
There was one problem, after installing all the dependencies with conda, it was crashing like that:
Traceback (most recent call last):
File "/mypath/miniconda/envs/metawrap-env/bin/concoct", line 6, in
import vbgmm
File "init.pxd", line 918, in init vbgmm
ValueError: numpy.ufunc size changed, may indicate binary incompatibility. Expected 216 from C header, got 192 from PyObject
Hi, just finished happily a first full run of metawrap :)
There was one problem, after installing all the dependencies with conda, it was crashing like that:
Traceback (most recent call last):
File "/mypath/miniconda/envs/metawrap-env/bin/concoct", line 6, in
import vbgmm
File "init.pxd", line 918, in init vbgmm
ValueError: numpy.ufunc size changed, may indicate binary incompatibility. Expected 216 from C header, got 192 from PyObject
What helped, was updating numpy from 1.14 to 1.16 with pip, like here:
scikit-learn-contrib/hdbscan#272
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