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flow.cylc
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flow.cylc
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#!jinja2
####################################
# define suite
# hopefully user does not have to edit anything below here
# set ICP = '19940101' %}
# set FCP = '20231231' %}
{% set ATMRES = ATMRES | default("C384") %}
{% set C96_REPLAY = False %}
{% set MAIL_ADDRESS = "neil.barton@noaa.gov" %}
{% set DEBUG_Q = True %}
####################################
# DATES option
# P1W : Run once a week Start on ICP
# P1D : Run once a day starting on ICP
# W-4T00 : Run on Thursdays
# W-1T00,W-4T00 : Run on Mondays and Thursdays
# 01T00 : Run on the First of each month
# R1/20151101T00,R1/... : Run these Specifc Dates
# 19940501T0000Z/P1Y,19941101T0000Z/P1Y : Run 1st of May and November (SFS baseline start dates)
####################################
# Options based on the above
{% set CHGRES_MODELS = "ATM, OCN, ICE" %}
{% set PERTURBATION_MODELS = "ATM, OCN" %}
{% if C96_REPLAY %}
{% set ATMRES = "C96" %}
{% set OCNRES = "mx100" %}
{% set MODELS = "ALL" %}
{% set POST_MODELS = "AER, ICE, MED" %}
{% endif %}
{% if ATMRES == "C384" %}
{% set ICP = '20230802' %}
{% set FCP = '20230920' %}
{% set DATES = "W-1T00,W-4T00" %}
{% set OCNRES = "mx025" %}
{% set MODELS = "ATM, OCN, ICE, WAV, MED" %}
{% set POST_MODELS = "AER, ICE, MED" %}
{% endif %}
{% if ATMRES == "C192" %}
{% set OCNRES = "mx025" %}
{% set MODELS = "ATM, OCN, ICE, WAV" %}
{% set POST_MODELS = "AER, ICE" %}
{% set DATES = "01T00" %}
{% endif %}
{% if ATMRES == "C96" %}
{% set ICP = '19940101' %}
{% set FCP = '20231231' %}
{% set DATES = "19940501T0000Z/P1Y,19941101T0000Z/P1Y" %}
{% set OCNRES = "mx100" %}
{% set MODELS = "ATM, OCN, ICE " %}
{% set POST_MODELS = "AER, ICE, SFC" %}
{% endif %}
[meta]
title = "grab, process, organize, and store replay ICs"
description = {{ ATMRES }}{{ OCNRES }}
[scheduler]
UTC mode = True
[[events]]
mail events = stall, abort, submission failed, fail
[[mail]]
to = {{ MAIL_ADDRESS }}
[task parameters]
models = {{ MODELS }}
post_models = {{ POST_MODELS }}
perturbation_models = {{ PERTURBATION_MODELS }}
chgres_models = {{ CHGRES_MODELS }}
[scheduling]
initial cycle point = {{ ICP }}
final cycle point = {{ FCP }}
runahead limit = P10
[[queues]]
[[[default]]]
limit = 10
{% if DEBUG_Q %}
[[[DEBUG_Q]]]
limit = 2
members = POST
{% endif %}
[[[AER_GRAB]]]
limit = 5
members = post_AER
[[[BACKGROUND]]]
limit = 10
members = GET, GET_PERTURBATIONS
[[graph]]
{{ DATES }} = """
GET
{% if C96_REPLAY %}
get_ALL => post_ICE & post_AER & post_MED
{% else %}
get_ATM => post_AER
get_ICE => post_ICE
{% if ATMRES == "C384" %}
get_MED => post_MED
{% else %}
post_AER => chgres_ATM
chgres_ATM => link_member_dirs
{% endif %}
{% if ATMRES == "C96" %}
chgres_ATM => post_SFC
post_SFC => link_member_dirs
{% endif %}
{% if OCNRES != "mx025" %}
post_ICE => chgres_ICE
get_OCN => chgres_OCN
CHGRES:succeed-all => link_member_dirs
{% endif %}
{% endif %} # C96_REPLAY
GET_PERTURBATIONS:succeed-all => link_member_dirs
GET:succeed-all => link_member_dirs
POST:succeed-all => link_member_dirs
link_member_dirs => ics_to_hpss
"""
################################################
# tasks
[runtime]
[[root]]
execution retry delays = 3*PT10M
platform = slurm_local
init-script = """
umask 022
set -xu
export SCRIPT_DIR=${CYLC_RUN_DIR}/${CYLC_WORKFLOW_NAME}/_cylc-install/source/SCRIPTS
"""
pre-script = """
source ${SCRIPT_DIR}/modules.sh
"""
[[[environment]]]
DTG = $(cylc cycle-point --template=%Y%m%d%H)
ATMRES = {{ ATMRES }}
OCNRES = {{ OCNRES }}
C96_REPLAY = {{ C96_REPLAY }}
[[[directives]]]
--account = marine-cpu
--ntasks = 1
--time = 00:30:00
--mem = 0
{% if DEBUG_Q %}
--qos = debug
{% endif %}
[[[events]]]
mail events = stall, abort, submission failed, failed
####################################
# grab experiments and obs
[[HPSS]]
[[[directives]]]
--partition = service
[[GET]]
platform = localhost
#[[[directives]]]
# --partition = service
[[get<models>]]
inherit = GET
script = """
model=${CYLC_TASK_PARAM_models}
${SCRIPT_DIR}/get_${model}.sh ${DTG}
"""
[[POST]]
platform = localhost
#[[[directives]]]
# --partition = service
[[post<post_models>]]
inherit = POST
script = """
model=${CYLC_TASK_PARAM_post_models}
${SCRIPT_DIR}/post_${model}.sh ${DTG}
"""
[[GET_PERTURBATIONS]]
platform = localhost
#inherit = HPSS
[[get_perturbations<perturbation_models>]]
inherit = GET_PERTURBATIONS
script = """
model=${CYLC_TASK_PARAM_perturbation_models}
${SCRIPT_DIR}/get_perturbations_${model}.sh ${DTG}
"""
[[CHGRES]]
[[[directives]]]
--ntasks = 6
[[chgres<chgres_models>]]
inherit = CHGRES
script = """
model=${CYLC_TASK_PARAM_chgres_models}
${SCRIPT_DIR}/chgres_${model}.sh ${DTG}
"""
[[link_member_dirs]]
platform = localhost
script = """
${SCRIPT_DIR}/link_member_dirs.sh ${DTG}
"""
[[ics_to_hpss]]
inherit = HPSS
script = """
${SCRIPT_DIR}/hpss_put_ICs.sh ${DTG}
"""