From f98433ff3661ef848d381ae65322623573a114cc Mon Sep 17 00:00:00 2001
From: AndrewEichmann-NOAA
 <58948505+AndrewEichmann-NOAA@users.noreply.github.com>
Date: Mon, 23 Jan 2023 10:11:39 -0500
Subject: [PATCH] Add new jjob for ocean analysis bmat (#1239)

Adds jjob for ocean analysis bmat. The intent is to have separate tasks for the ocean analysis and generation of the b matrix. Once this is merged, additional modifications will be made to GDASApp to allow it to be run with the other global-workflow components of ocean/ice DA

Refs: https://github.com/NOAA-EMC/GDASApp/issues/263
---
 jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT | 45 +++++++++++++++++++++++++++
 1 file changed, 45 insertions(+)
 create mode 100755 jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT

diff --git a/jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT b/jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT
new file mode 100755
index 0000000000..a218967cc2
--- /dev/null
+++ b/jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT
@@ -0,0 +1,45 @@
+#!/bin/bash
+export STRICT="NO"
+source "${HOMEgfs}/ush/preamble.sh"
+
+
+export DATA="${DATAROOT}/${RUN}ocnanal_${cyc}"
+source "${HOMEgfs}/ush/jjob_header.sh" -e "ocnanalrun" -c "base ocnanal ocnanalrun"
+
+
+##############################################
+# Set variables used in the script
+##############################################
+
+
+##############################################
+# Begin JOB SPECIFIC work
+##############################################
+
+export COMOUT=${COMOUT:-${ROTDIR}/${CDUMP}.${PDY}/${cyc}/ocean}
+
+###############################################################
+# Run relevant script
+
+EXSCRIPT=${GDASPREPPY:-${HOMEgfs}/sorc/gdas.cd/scripts/exgdas_global_marine_analysis_bmat.sh}
+${EXSCRIPT}
+status=$?
+[[ ${status} -ne 0 ]] && exit "${status}"
+
+##############################################
+# End JOB SPECIFIC work
+##############################################
+
+##############################################
+# Final processing
+##############################################
+if [[ -e "${pgmout}" ]] ; then
+  cat "${pgmout}"
+fi
+
+##########################################
+# Do not remove the Temporary working directory (do this in POST)
+##########################################
+cd "${DATAROOT}" || exit 1
+
+exit 0