From 792b91045c1b72d0439576c0ed38c64cfec5c08b Mon Sep 17 00:00:00 2001 From: "russ.treadon" Date: Thu, 1 Apr 2021 15:18:12 +0000 Subject: [PATCH 01/10] Issue #301: modify earc.sh to retain enkfgdas files needed by metplus --- jobs/rocoto/earc.sh | 38 +++++++++++++++++++++++--------------- 1 file changed, 23 insertions(+), 15 deletions(-) diff --git a/jobs/rocoto/earc.sh b/jobs/rocoto/earc.sh index 54dc87e3cb..7c4172f9a0 100755 --- a/jobs/rocoto/earc.sh +++ b/jobs/rocoto/earc.sh @@ -159,21 +159,29 @@ if [ $ENSGRP -eq 0 ]; then gPDY=$(echo $GDATE | cut -c1-8) gcyc=$(echo $GDATE | cut -c9-10) - # Handle GDAS and GFS EnKF directories separately - COMIN_ENS="$ROTDIR/enkfgdas.$gPDY/$gcyc/$COMPONENT" - [[ -d $COMIN_ENS ]] && rm -rf $COMIN_ENS - COMIN_ENS="$ROTDIR/enkfgfs.$gPDY/$gcyc/$COMPONENT" - [[ -d $COMIN_ENS ]] && rm -rf $COMIN_ENS - - # Remove any empty directories - COMIN_ENS="$ROTDIR/enkfgdas.$gPDY/$COMPONENT" - if [ -d $COMIN_ENS ] ; then - [[ ! "$(ls -A $COMIN_ENS)" ]] && rm -rf $COMIN_ENS - fi - COMIN_ENS="$ROTDIR/enkfgfs.$gPDY/$COMPONENT" - if [ -d $COMIN_ENS ] ; then - [[ ! "$(ls -A $COMIN_ENS)" ]] && rm -rf $COMIN_ENS - fi + # Loop over GDAS and GFS EnKF directories separately. + clist="gdas gfs" + for ctype in $clist; do + COMIN_ENS="$ROTDIR/enkf$ctype.$gPDY/$gcyc/$COMPONENT" + if [ -d $COMIN_ENS ]; then + rocotolog="$EXPDIR/logs/${GDATE}.log" + if [ -f $rocotolog ]; then + testend=$(tail -n 1 $rocotolog | grep "This cycle is complete: Success") + rc=$? + if [ $rc -eq 0 ]; then + # Retain f006.ens files. Remove everything else + for file in `ls $COMIN_ENS | grep -v f006.ens`; do + rm -rf $COMIN_ENS/$file + done + fi + fi + fi + + # Remove empty directories + if [ -d $COMIN_ENS ] ; then + [[ ! "$(ls -A $COMIN_ENS)" ]] && rm -rf $COMIN_ENS + fi + done # Advance to next cycle GDATE=$($NDATE +$assim_freq $GDATE) From 88c54d9c0b1546473d980b5361e3187f9de4a14e Mon Sep 17 00:00:00 2001 From: "russ.treadon" Date: Thu, 15 Apr 2021 10:58:33 +0000 Subject: [PATCH 02/10] Issue #301: update file/directory retention/cleanup and DA build option * modify arch.sh and earc.sh file/directory retention and clean up * add pruned NCO install option to build_gsi.sh --- jobs/rocoto/arch.sh | 73 +++++++++++++++++++++++++++++++-------------- jobs/rocoto/earc.sh | 14 +++++++++ sorc/build_gsi.sh | 1 + 3 files changed, 66 insertions(+), 22 deletions(-) diff --git a/jobs/rocoto/arch.sh b/jobs/rocoto/arch.sh index ee3af795c2..b33857838f 100755 --- a/jobs/rocoto/arch.sh +++ b/jobs/rocoto/arch.sh @@ -109,20 +109,21 @@ if [ $CDUMP = "gfs" ]; then done fi -# Archive atmospheric gaussian gfs forecast files for fit2obs -VFYARC=${VFYARC:-$ROTDIR/vrfyarch} -[[ ! -d $VFYARC ]] && mkdir -p $VFYARC +# Archive required gaussian gfs forecast files for Fit2Obs if [ $CDUMP = "gfs" -a $FITSARC = "YES" ]; then + VFYARC=${VFYARC:-$ROTDIR/vrfyarch} + [[ ! -d $VFYARC ]] && mkdir -p $VFYARC mkdir -p $VFYARC/${CDUMP}.$PDY/$cyc + prefix=${CDUMP}.t${cyc}z fhmax=${FHMAX_FITS:-$FHMAX_GFS} fhr=0 while [[ $fhr -le $fhmax ]]; do - fhr3=$(printf %03i $fhr) - sfcfile=${CDUMP}.t${cyc}z.sfcf${fhr3}${ASUFFIX} - sigfile=${CDUMP}.t${cyc}z.atmf${fhr3}${ASUFFIX} - $NCP $sfcfile $VFYARC/${CDUMP}.$PDY/$cyc/ - $NCP $sigfile $VFYARC/${CDUMP}.$PDY/$cyc/ - (( fhr = $fhr + 6 )) + fhr3=$(printf %03i $fhr) + sfcfile=${prefix}.sfcf${fhr3}${ASUFFIX} + sigfile=${prefix}.atmf${fhr3}${ASUFFIX} + $NCP $sfcfile $VFYARC/${CDUMP}.$PDY/$cyc/ + $NCP $sigfile $VFYARC/${CDUMP}.$PDY/$cyc/ + (( fhr = $fhr + 6 )) done fi @@ -307,9 +308,10 @@ if [[ "${DELETE_COM_IN_ARCHIVE_JOB:-YES}" == NO ]] ; then exit 0 fi -# Step back every assim_freq hours -# and remove old rotating directories for successful cycles -# defaults from 24h to 120h +# Step back every assim_freq hours and remove old rotating directories +# for successful cycles (defaults from 24h to 120h). If GLDAS is +# active, retain files needed by GLDAS update. Independent of GLDAS, +# retain files needed by Fit2Obs DO_GLDAS=${DO_GLDAS:-"NO"} GDATEEND=$($NDATE -${RMOLDEND:-24} $CDATE) GDATE=$($NDATE -${RMOLDSTD:-120} $CDATE) @@ -330,14 +332,26 @@ while [ $GDATE -le $GDATEEND ]; do if [ -d $COMINwave ]; then rm -rf $COMINwave ; fi if [ -d $COMINrtofs -a $GDATE -lt $RTOFS_DATE ]; then rm -rf $COMINrtofs ; fi if [ $CDUMP != "gdas" -o $DO_GLDAS = "NO" -o $GDATE -lt $GLDAS_DATE ]; then - rm -rf $COMIN + if [ $CDUMP = "gdas" ]; then + for file in `ls $COMIN |grep -v prepbufr |grep -v cnvstat |grep -v atmanl.nc`; do + rm -rf $COMIN/$file + done + else + rm -rf $COMIN + fi else - for file in `ls $COMIN |grep -v sflux |grep -v RESTART`; do - rm -rf $COMIN/$file - done - for file in `ls $COMIN/RESTART |grep -v sfcanl `; do - rm -rf $COMIN/RESTART/$file - done + if [ $DO_GLDAS = "YES" ]; then + for file in `ls $COMIN |grep -v sflux |grep -v RESTART |grep -v prepbufr |grep -v cnvstat |grep -v atmanl.nc`; do + rm -rf $COMIN/$file + done + for file in `ls $COMIN/RESTART |grep -v sfcanl `; do + rm -rf $COMIN/RESTART/$file + done + else + for file in `ls $COMIN |grep -v prepbufr |grep -v cnvstat |grep -v atmanl.nc`; do + rm -rf $COMIN/$file + done + fi fi fi fi @@ -361,10 +375,13 @@ while [ $GDATE -le $GDATEEND ]; do GDATE=$($NDATE +$assim_freq $GDATE) done -# Remove archived atmospheric gaussian files used for fit2obs in $VFYARC that are $FHMAX_FITS hrs behind. -# touch existing files to prevent the files from being removed by the operation system. +# Remove archived gaussian files used for Fit2Obs in $VFYARC that are +# $FHMAX_FITS plus a delta before $CDATE. Touch existing archived +# gaussian files to prevent the files from being removed by automatic +# scrubber present on some machines. + if [ $CDUMP = "gfs" ]; then - fhmax=$((FHMAX_FITS+36)) + fhmax=$((FHMAX_FITS+36)) RDATE=$($NDATE -$fhmax $CDATE) rPDY=$(echo $RDATE | cut -c1-8) COMIN="$VFYARC/$CDUMP.$rPDY" @@ -380,5 +397,17 @@ if [ $CDUMP = "gfs" ]; then done fi +# Remove $CDUMP.$rPDY for the older of GDATE or RDATE +GDATE=$($NDATE -${RMOLDSTD:-120} $CDATE) +fhmax=$FHMAX_GFS +RDATE=$($NDATE -$fhmax $CDATE) +if [ $GDATE -lt $RDATE ]; then + RDATE=$GDATE +fi +rPDY=$(echo $RDATE | cut -c1-8) +COMIN="$ROTDIR/$CDUMP.$rPDY" +[[ -d $COMIN ]] && rm -rf $COMIN + + ############################################################### exit 0 diff --git a/jobs/rocoto/earc.sh b/jobs/rocoto/earc.sh index 7c4172f9a0..f33bbbbe76 100755 --- a/jobs/rocoto/earc.sh +++ b/jobs/rocoto/earc.sh @@ -190,5 +190,19 @@ if [ $ENSGRP -eq 0 ]; then fi +# Remove enkf*.$rPDY for the older of GDATE or RDATE +GDATE=$($NDATE -${RMOLDSTD_ENKF:-120} $CDATE) +fhmax=$FHMAX_GFS +RDATE=$($NDATE -$fhmax $CDATE) +if [ $GDATE -lt $RDATE ]; then + RDATE=$GDATE +fi +rPDY=$(echo $RDATE | cut -c1-8) +clist="gdas gfs" +for ctype in $clist; do + COMIN="$ROTDIR/enkf$ctype.$rPDY" + [[ -d $COMIN ]] && rm -rf $COMIN +done + ############################################################### exit 0 diff --git a/sorc/build_gsi.sh b/sorc/build_gsi.sh index f5f938a161..1f202a805c 100755 --- a/sorc/build_gsi.sh +++ b/sorc/build_gsi.sh @@ -21,6 +21,7 @@ fi cd gsi.fd/ush/ ./build_all_cmake.sh "PRODUCTION" "$cwd/gsi.fd" +##./build_all_cmake.sh "PRODUCTION" "$cwd/gsi.fd" "NCO" # use this line for pruned NCO install exit From 3142a8219c74b7b33a2bee1aed4ed7acd34ed0dc Mon Sep 17 00:00:00 2001 From: "catherine.thomas" Date: Mon, 26 Apr 2021 16:59:43 -0400 Subject: [PATCH 03/10] Add Release Notes for GFSv16.1 Added the file docs/Release_Notes.gfs.v16.1.0.txt to release branch release/gfsv16.1. Refs: #301 --- docs/Release_Notes.gfs.v16.1.0.txt | 145 +++++++++++++++++++++++++++++ 1 file changed, 145 insertions(+) create mode 100644 docs/Release_Notes.gfs.v16.1.0.txt diff --git a/docs/Release_Notes.gfs.v16.1.0.txt b/docs/Release_Notes.gfs.v16.1.0.txt new file mode 100644 index 0000000000..a1b78cf0ba --- /dev/null +++ b/docs/Release_Notes.gfs.v16.1.0.txt @@ -0,0 +1,145 @@ +GFS V16.1.0 RELEASE NOTES + + +PRELUDE + + NOAA awarded Delivery Order 2 (DO-2) of its commercial radio occultation (RO) + data purchase to GeoOptics on February 19, 2021. This purchase covers 1300 + occultations a day over a six month period with the data flow starting on + March 17, 2021. + + The quality of the GeoOptics occultations was examined during Delivery + Order 1 (DO-1) in December 2020 and January 2021. Forecast impact assessment + was conducted using half resolution parallels in the GFSv16 framework. + + Testing of the DO-2 data is being carried out using a real time full + resolution parallel, v161rt1. It was initially started in mid-February + to test reproducibility with the GFSv16 NCO parallel, then adjusted to reduce + computational footprint. Data from GeoOptics began to be assimilated as soon + as it was available on March 17. Configuration for the use of the commercial + data was informed by the results of DO-1 experimentation, with the quality + control and observation errors being treated as other RO data with the + exception of lowering the upper bound of data. + + This package also addresses several GFS v16 bugzilla tickets. GFS v16 + bugzilla tickets #1196 and #1205 are resolved in this package. The error + reported in bugzilla ticket #1206 has been documented to be compiler, not + code, specific. The DA aspect of GFS v16 bugzilla tickets #216, #1198, #1218, + #1221, and #1222 are also addressed by this package. None of the DA + bugzilla changes alter analysis results. + + GFSv16 introduced a bug where the sign of the layer height (delz) increment + was flipped. The included bugfix reverts the sign as originally intended. + This fix was tested in both a low resolution setting and with a full + resolution parallel, v16rt2c. Once v16rt2c was seen as viable, it also + began assimilating the GeoOptics data so both changes were tested in one + package. + + +IMPLEMENTATION INSTRUCTIONS + + The NOAA VLab and both the NOAA-EMC and NCAR organization spaces on GitHub.com + are used to manage the GFS.v16.1 code. The SPA(s) handling the GFS.v16.1 + implementation need to have permissions to clone VLab gerrit repositories and + the private NCAR UPP_GTG repository. All NOAA-EMC organization repositories are + publicly readable and do not require access permissions. Please follow the + following steps to install the package on WCOSS-Dell: + + 1) cd $NWROOTp3 + + 2) mkdir gfs.v16.1.0 + + 3) cd gfs.v16.1.0 + + 4) git clone -b EMC-v16.1.0 https://github.com/NOAA-EMC/global-workflow.git . + + 5) cd sorc + + 6) ./checkout.sh -o + * This script extracts the following GFS components: + MODEL tag GFS.v16.0.16 Jun.Wang@noaa.gov + GSI tag gfsda.v16.1.0 Russ.Treadon@noaa.gov + GLDAS tag gldas_gfsv16_release.v1.12.0 Helin.Wei@noaa.gov + UFS_UTILS tag ops-gfsv16.0.0 George.Gayno@noaa.gov + POST tag upp_gfsv16_release.v1.1.3 Wen.Meng@noaa.gov + WAFS tag gfs_wafs.v6.0.21 Yali.Mao@noaa.gov + + 7) ./build_all.sh + * This script compiles all GFS components. Runtime output from the build for + each package is written to log files in directory logs. To build an + individual program, for instance, gsi, use build_gsi.sh. + + 8) ./link_fv3gfs.sh nco dell + + +SORC CHANGES + +* sorc/ + * checkout.sh will checkout the following changed model tags: + * GSI; tag gfsda.v16.1.0 - See release notes + doc/Release_Notes.gfsda.v16.1.0.txt in the GSI tag for details. + + * POST; tag upp_gfsv16_release.v1.1.3 - There are no changes in this tag + compared to operations. The tag number was updated from + tag upp_gfsv16_release.v1.1.1 to incorporate the local changes made + in operations. + + * WAFS; tag gfs_wafs.v6.0.21 - There are no changes in this tag compared to + operations. The tag number was updated from gfs_wafs.v6.0.17 to + incorporate the local changes made in operations. + + +JOBS CHANGES + +* No change from GFS v16.0 + + +FIX CHANGES + +* The contents of fix/fix_gsi have been updated. See release notes + doc/Release_Notes.gfsda.v16.1.0.txt in the NOAA-EMC/GSI tag gfsda.v16.1.0 + for details. + + +RESOURCE INFORMATION + +* No change from GFS v16.0 in terms of modules, computational resources, + run time, or disk space. + + +PRE-IMPLEMENTATION TESTING REQUIREMENTS + +* Which production jobs should be tested as part of this implementation? + * The entire GFS v16.1 package needs to be installed and tested. + +* Does this change require a 30-day evaluation? + * No. + + +DISSEMINATION INFORMATION + +* Where should this output be sent? + * No change from GFS v16.0 + +* Who are the users? + * No change from GFS v16.0 + +* Which output files should be transferred from PROD WCOSS to DEV WCOSS? + * No change from GFS v16.0 + +* Directory changes + * No change from GFS v16.0 + +* File changes + * No change from GFS v16.0 + + +HPSS ARCHIVE + +* No change from GFS v16.0 + + +JOB DEPENDENCIES AND FLOW DIAGRAM + +* No change from GFS v16.0 + From b1e924cd44eba056443cb2a6789b1dc8040a02e1 Mon Sep 17 00:00:00 2001 From: "catherine.thomas" Date: Tue, 27 Apr 2021 07:31:44 -0400 Subject: [PATCH 04/10] Change GSI tag to gfsda.v16.1.0 The GSI tag has been updated for the v16.1 implementation. This implementation turns on commercial RO data from GeoOptics. See release notes docs/Release_Notes.gfs.v16.1.0.txt in the global-workflow and release notes doc/Release_Notes.gfsda.v16.1.0.txt in the GSI for details. Refs: #301 --- sorc/checkout.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sorc/checkout.sh b/sorc/checkout.sh index 56e255ea17..5cdaf59614 100755 --- a/sorc/checkout.sh +++ b/sorc/checkout.sh @@ -38,7 +38,7 @@ if [[ ! -d gsi.fd ]] ; then rm -f ${topdir}/checkout-gsi.log git clone --recursive https://github.com/NOAA-EMC/GSI.git gsi.fd >> ${topdir}/checkout-gsi.log 2>&1 cd gsi.fd - git checkout gfsda.v16.0.0 + git checkout gfsda.v16.1.0 git submodule update cd ${topdir} else From 3271bac5b2072bfa2c0c0d229f050b647cd28925 Mon Sep 17 00:00:00 2001 From: "catherine.thomas" Date: Tue, 27 Apr 2021 10:08:54 -0400 Subject: [PATCH 05/10] Update Externals.cfg and release notes for v16.1 Updated Externals.cfg GSI tag to gfsda.v16.1.0. Added sections in the release notes to explicitly say no changes to parm/config and scripts. Refs: #301 --- Externals.cfg | 2 +- docs/Release_Notes.gfs.v16.1.0.txt | 10 ++++++++++ 2 files changed, 11 insertions(+), 1 deletion(-) diff --git a/Externals.cfg b/Externals.cfg index 1e9361ca88..65aa574bf3 100644 --- a/Externals.cfg +++ b/Externals.cfg @@ -8,7 +8,7 @@ protocol = git required = True [GSI] -tag = gfsda.v16.0.0 +tag = gfsda.v16.1.0 local_path = sorc/gsi.fd repo_url = https://github.com/NOAA-EMC/GSI.git protocol = git diff --git a/docs/Release_Notes.gfs.v16.1.0.txt b/docs/Release_Notes.gfs.v16.1.0.txt index a1b78cf0ba..8d57cdfb80 100644 --- a/docs/Release_Notes.gfs.v16.1.0.txt +++ b/docs/Release_Notes.gfs.v16.1.0.txt @@ -94,6 +94,16 @@ JOBS CHANGES * No change from GFS v16.0 +PARM/CONFIG CHANGES + +* No change from GFS v16.0 + + +SCRIPT CHANGES + +* No change from GFS v16.0 + + FIX CHANGES * The contents of fix/fix_gsi have been updated. See release notes From 173bb4814ed2d2bc6e3436263f55c199f8dc8721 Mon Sep 17 00:00:00 2001 From: "catherine.thomas" Date: Mon, 3 May 2021 11:52:42 -0400 Subject: [PATCH 06/10] Update v16.1 release notes for wave fixes Refs: #301 --- docs/Release_Notes.gfs.v16.1.0.txt | 40 +++++++++++++++++++++++++++--- 1 file changed, 37 insertions(+), 3 deletions(-) diff --git a/docs/Release_Notes.gfs.v16.1.0.txt b/docs/Release_Notes.gfs.v16.1.0.txt index 8d57cdfb80..ec9f107891 100644 --- a/docs/Release_Notes.gfs.v16.1.0.txt +++ b/docs/Release_Notes.gfs.v16.1.0.txt @@ -35,6 +35,26 @@ PRELUDE began assimilating the GeoOptics data so both changes were tested in one package. + There are several wave related fixes being included in this update. The + first is including the RW-NHC* boundary points which are used in NHC's + offline NWPS system were removed from multi_1 to GFSv16. The second is + to fix the interpolation to the East Pacific wave grid to include all + of the American Samoa islands. + + +CHANGES TO RESOURCES AND FILE SIZES + + Impact of including RW-NHC points is: There should be no impact to the + forecast job timing, however the *wave.out_pnt.points* files in the + wave/rundata com directories will each increase in size by 6MB. The + JGLOBAL_WAVE_POST_BNDPNTBLL and JGLOBAL_WAVE_POST_BNDPNT will now take + approximately 20 minutes longer. The gfswave.tZZz.ibpbull_tar will + increase in size to be 78M, gfswave.tZZz.ibpcbull_tar will now be 42M + and the gfswave.tZZz.ibp_tar file will now be 11 GB. + + Impact of East Pacific and global 0p25 wave grid fixes: There are no + impacts in terms of resources or file size. + IMPLEMENTATION INSTRUCTIONS @@ -76,6 +96,10 @@ SORC CHANGES * sorc/ * checkout.sh will checkout the following changed model tags: + * MODEL; tag GFS.v16.0.16 - There are no changes in this tag + compared to operations. The tag number was updated from + tag GFS.v16.0.15 to incorporate the local changes made in operations. + * GSI; tag gfsda.v16.1.0 - See release notes doc/Release_Notes.gfsda.v16.1.0.txt in the GSI tag for details. @@ -110,11 +134,21 @@ FIX CHANGES doc/Release_Notes.gfsda.v16.1.0.txt in the NOAA-EMC/GSI tag gfsda.v16.1.0 for details. +* For the wave fix to include the RW-NHC-* boundary points for the wave + point output, the following two fix files can be copied to the + fix/fix_wave_gfs folder: + /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/wave_gfs.buoys + /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/wave_gfs.buoys.full + -RESOURCE INFORMATION +* For the wave fix to the East Pacific wave grid interpolation the following + fix file with fix can be copied to the fix/fix_wave_gfs folder: + /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/ep_10m_interp.inp.tmpl -* No change from GFS v16.0 in terms of modules, computational resources, - run time, or disk space. +* For the wave fix to include the Persian Gulf the following to fix files + need to be copied to the fix/fix_wave_gfs folder: + /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/ww3_grid.inp.glo_15mxt + /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/WHTGRIDINT.bin.glo_15mxt PRE-IMPLEMENTATION TESTING REQUIREMENTS From fda26e9010ef59f69cd378c3092bdc82e57e4ec2 Mon Sep 17 00:00:00 2001 From: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com> Date: Mon, 3 May 2021 12:08:12 -0400 Subject: [PATCH 07/10] Update config.base.nco.static Change HOMEobsproc_prep and HOMEobsproc_network to point at NCO installation of these packages. --- parm/config/config.base.nco.static | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/parm/config/config.base.nco.static b/parm/config/config.base.nco.static index 0a7076f4cf..a10242076d 100755 --- a/parm/config/config.base.nco.static +++ b/parm/config/config.base.nco.static @@ -64,8 +64,8 @@ export REALTIME="YES" export FIXgsi="$HOMEgfs/fix/fix_gsi" export HOMEfv3gfs="$HOMEgfs/sorc/fv3gfs.fd" export HOMEpost="$HOMEgfs" -export HOMEobsproc_prep="$BASE_GIT/obsproc/gfsv16b/obsproc_prep.iss70457.netcdfhistory" -export HOMEobsproc_network="$BASE_GIT/obsproc/gfsv16b/obsproc_global.iss71402.supportGFSv16" +export HOMEobsproc_prep="$NWPROD/obsproc_prep.v5.4.0" +export HOMEobsproc_network="$NWPROD/obsproc_global.v3.4.1" export HOMEobsproc_global=$HOMEobsproc_network export BASE_VERIF="$BASE_GIT/verif/global/tags/vsdb" From 0b9607711900e0da0de3d3dc1af91cc4dc9dd04d Mon Sep 17 00:00:00 2001 From: "catherine.thomas" Date: Mon, 3 May 2021 12:31:01 -0400 Subject: [PATCH 08/10] Update v16.1 release notes with wave script fix Refs: #301 --- docs/Release_Notes.gfs.v16.1.0.txt | 24 ++++++++++++++---------- 1 file changed, 14 insertions(+), 10 deletions(-) diff --git a/docs/Release_Notes.gfs.v16.1.0.txt b/docs/Release_Notes.gfs.v16.1.0.txt index ec9f107891..82960aee09 100644 --- a/docs/Release_Notes.gfs.v16.1.0.txt +++ b/docs/Release_Notes.gfs.v16.1.0.txt @@ -35,11 +35,14 @@ PRELUDE began assimilating the GeoOptics data so both changes were tested in one package. - There are several wave related fixes being included in this update. The - first is including the RW-NHC* boundary points which are used in NHC's - offline NWPS system were removed from multi_1 to GFSv16. The second is - to fix the interpolation to the East Pacific wave grid to include all - of the American Samoa islands. + There are several wave related fixes being included in this update: + * Including the RW-NH* boundary points which are used in NHC's + offline NWPS system were removed from multi_1 to GFSv16, which + also requires a minor script bug fix. + * Fix the interpolation to the East Pacific wave grid to include + all of the American Samoa islands. + * Unmask the Gulf of California, Red Sea and Persian Gulf in the + global 0p25 interpolated wave output grid. CHANGES TO RESOURCES AND FILE SIZES @@ -125,7 +128,8 @@ PARM/CONFIG CHANGES SCRIPT CHANGES -* No change from GFS v16.0 +* There is one bug fix for waves that is a script change in scripts/exgfs_wave_post_pnt.sh + to ensure all point output is created (for example for the RW-NH* points). FIX CHANGES @@ -134,7 +138,7 @@ FIX CHANGES doc/Release_Notes.gfsda.v16.1.0.txt in the NOAA-EMC/GSI tag gfsda.v16.1.0 for details. -* For the wave fix to include the RW-NHC-* boundary points for the wave +* For the wave fix to include the RW-NH-* boundary points for the wave point output, the following two fix files can be copied to the fix/fix_wave_gfs folder: /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/wave_gfs.buoys @@ -142,11 +146,11 @@ FIX CHANGES * For the wave fix to the East Pacific wave grid interpolation the following - fix file with fix can be copied to the fix/fix_wave_gfs folder: + fix file with fix can be copied to the fix/fix_wave_gfs folder: /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/ep_10m_interp.inp.tmpl -* For the wave fix to include the Persian Gulf the following to fix files - need to be copied to the fix/fix_wave_gfs folder: +* For the wave fix to include the Gulf of California, Red Sea, and Persian Gulf + the following to fix files need to be copied to the fix/fix_wave_gfs folder: /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/ww3_grid.inp.glo_15mxt /gpfs/dell2/emc/modeling/noscrub/emc.glopara/git/fv3gfs/fix_wave_gfs_v16.1.1/WHTGRIDINT.bin.glo_15mxt From 68d9b5b5ff072b1f62131a9f7495c33c14c4a850 Mon Sep 17 00:00:00 2001 From: "kate.friedman" Date: Thu, 6 May 2021 19:28:17 +0000 Subject: [PATCH 09/10] WAFS tag update to gfs_wafs.v6.0.22 for bug fix Refs: #1,#321 --- sorc/checkout.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sorc/checkout.sh b/sorc/checkout.sh index 5cdaf59614..ada1972929 100755 --- a/sorc/checkout.sh +++ b/sorc/checkout.sh @@ -95,7 +95,7 @@ if [[ ! -d gfs_wafs.fd ]] ; then rm -f ${topdir}/checkout-gfs_wafs.log git clone --recursive https://github.com/NOAA-EMC/EMC_gfs_wafs.git gfs_wafs.fd >> ${topdir}/checkout-gfs_wafs.log 2>&1 cd gfs_wafs.fd - git checkout gfs_wafs.v6.0.21 + git checkout gfs_wafs.v6.0.22 cd ${topdir} else echo 'Skip. Directory gfs_wafs.fd already exists.' From a8ed770d9c1e8614c5477d0129d6eaf5fe4e2085 Mon Sep 17 00:00:00 2001 From: "kate.friedman" Date: Thu, 6 May 2021 19:32:36 +0000 Subject: [PATCH 10/10] Companion update to Externals.cfg for WAFS tag update to gfs_wafs.v6.0.22 Refs: #1,#321 --- Externals.cfg | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Externals.cfg b/Externals.cfg index 65aa574bf3..50ebfcf4c0 100644 --- a/Externals.cfg +++ b/Externals.cfg @@ -43,7 +43,7 @@ protocol = git required = True [EMC_gfs_wafs] -tag = gfs_wafs.v6.0.21 +tag = gfs_wafs.v6.0.22 local_path = sorc/gfs_wafs.fd repo_url = https://github.com/NOAA-EMC/EMC_gfs_wafs.git protocol = git