task_separation

Code for the article "Cancer cells forgo translating the transcribed genes of non-specialized tasks"

To run this code,

Build a docker image using the Dockerfile or pull the latest image bcmslab/task
Run the three R scripts in code/ in this order
1. code/prepare_data.R: downloads the required data from source
2. code/transcription_translation.R: excutes the code to perform the analysis and save the output
3. analysis.Rmd: genrates the figures and graphs