{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":342827636,"defaultBranch":"main","name":"plasmid-screen","ownerLogin":"BCCDC-PHL","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-02-27T10:18:58.000Z","ownerAvatar":"https://github.com/avatars/u/69595841?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1718988334.0","currentOid":""},"activityList":{"items":[{"before":"74b80484abaeeb762d801a819c72c6ec1d96da26","after":"2898065e1702c00d5b6acb38565f79ac81cd0633","ref":"refs/heads/main","pushedAt":"2024-06-20T17:29:06.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Add testing pipeline (#35)\n\n* Add testing pipeline\r\n\r\n* Add env files\r\n\r\n* prepare mob-suite db prior to use\r\n\r\n* Use full path to mob-suite db\r\n\r\n* Use different sample for test data\r\n\r\n* update\r\n\r\n* Fix provenance\r\n\r\n* Update README\r\n\r\n* fix provenance\r\n\r\n* fix provenance\r\n\r\n* fix provenance in README","shortMessageHtmlLink":"Add testing pipeline (#35)"}},{"before":"322acba4ea829729fb6ff0f4c3814f860f975f1b","after":"551f518b82aebb8dbc5483bc6bd4403e3420cb9f","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-20T16:46:23.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"fix provenance in README","shortMessageHtmlLink":"fix provenance in README"}},{"before":"ea8902cbb0c1d8f7492ebbb3d8b5594eaaf0580f","after":"322acba4ea829729fb6ff0f4c3814f860f975f1b","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-20T00:20:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"fix provenance","shortMessageHtmlLink":"fix provenance"}},{"before":"30dcca7a9f1f4ceab3f024ecb7f91483e866a21c","after":"ea8902cbb0c1d8f7492ebbb3d8b5594eaaf0580f","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-20T00:02:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Update README","shortMessageHtmlLink":"Update README"}},{"before":"2b2318abcc7d845b1129d995b2d7310dd82cfe60","after":"30dcca7a9f1f4ceab3f024ecb7f91483e866a21c","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-20T00:00:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Fix provenance","shortMessageHtmlLink":"Fix provenance"}},{"before":"df9ac1740fb48e7eeb94cb688a187b5c5e52f454","after":"2b2318abcc7d845b1129d995b2d7310dd82cfe60","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T23:34:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"update","shortMessageHtmlLink":"update"}},{"before":"1c8a0027f938aa484a1d64806a32bc40845ea15c","after":"df9ac1740fb48e7eeb94cb688a187b5c5e52f454","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T23:27:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Use different sample for test data","shortMessageHtmlLink":"Use different sample for test data"}},{"before":"9e8fe9ad05976cdda8ad8983014ee4f121bc7587","after":"1c8a0027f938aa484a1d64806a32bc40845ea15c","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T22:29:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Use full path to mob-suite db","shortMessageHtmlLink":"Use full path to mob-suite db"}},{"before":"8c1bdb12484302bde157ff780c808dceb6de41f1","after":"9e8fe9ad05976cdda8ad8983014ee4f121bc7587","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T21:53:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"prepare mob-suite db prior to use","shortMessageHtmlLink":"prepare mob-suite db prior to use"}},{"before":"a7c1fcab4b2f53701aadf0018b423eadf99a4702","after":"8c1bdb12484302bde157ff780c808dceb6de41f1","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T21:25:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Add env files","shortMessageHtmlLink":"Add env files"}},{"before":null,"after":"a7c1fcab4b2f53701aadf0018b423eadf99a4702","ref":"refs/heads/testing-workflow","pushedAt":"2024-06-19T21:23:02.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Add testing pipeline","shortMessageHtmlLink":"Add testing pipeline"}},{"before":"257a00e6996c958c13c165467f7fb186e97235dd","after":"74b80484abaeeb762d801a819c72c6ec1d96da26","ref":"refs/heads/main","pushedAt":"2024-06-19T21:07:53.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"collect outputs (#34)","shortMessageHtmlLink":"collect outputs (#34)"}},{"before":null,"after":"e178bab18acf4a0e7850fc641b775b10a577748b","ref":"refs/heads/collect-outputs","pushedAt":"2024-06-19T20:31:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"collect outputs","shortMessageHtmlLink":"collect outputs"}},{"before":"2f2f087972fe0d9c3fce69d06ccb5687dffcd3b1","after":"257a00e6996c958c13c165467f7fb186e97235dd","ref":"refs/heads/main","pushedAt":"2024-06-18T23:50:31.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Run abricate using ncbi and plasmidfinder dbs (#32)\n\n* run abricate using ncbi and plasmidfinder dbs\r\n\r\n* update README and fix abricate provenance","shortMessageHtmlLink":"Run abricate using ncbi and plasmidfinder dbs (#32)"}},{"before":"d94afc88437fd3954efaa00d24b03fe01c87dcf6","after":"8caa09f565eef4715c3f8729e5ac797f0f8aafbb","ref":"refs/heads/abricate-plasmidfinder","pushedAt":"2024-06-18T23:49:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"update README and fix abricate provenance","shortMessageHtmlLink":"update README and fix abricate provenance"}},{"before":null,"after":"d94afc88437fd3954efaa00d24b03fe01c87dcf6","ref":"refs/heads/abricate-plasmidfinder","pushedAt":"2024-06-18T23:22:36.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"run abricate using ncbi and plasmidfinder dbs","shortMessageHtmlLink":"run abricate using ncbi and plasmidfinder dbs"}},{"before":"36d8db17c040558fd4e3c45cf4c60bbf7d205299","after":"2f2f087972fe0d9c3fce69d06ccb5687dffcd3b1","ref":"refs/heads/main","pushedAt":"2024-06-18T22:58:33.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"update provenance format (#29)","shortMessageHtmlLink":"update provenance format (#29)"}},{"before":null,"after":"f10e786316e10eee96ba91b97fb60b02f890a6e5","ref":"refs/heads/provenance-update","pushedAt":"2024-06-18T22:58:00.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"update provenance format","shortMessageHtmlLink":"update provenance format"}},{"before":"112f3744965242af71e1c5011136a6f3199540d3","after":"36d8db17c040558fd4e3c45cf4c60bbf7d205299","ref":"refs/heads/main","pushedAt":"2023-09-12T22:00:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Adjust regex to allow for dragonflye-style contig IDs (#26)","shortMessageHtmlLink":"Adjust regex to allow for dragonflye-style contig IDs (#26)"}},{"before":null,"after":"921c7173a975842edf71a13cad36881f4170d283","ref":"refs/heads/fix-contig-ids","pushedAt":"2023-09-12T20:53:50.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Adjust regex to allow for dragonflye-style contig IDs","shortMessageHtmlLink":"Adjust regex to allow for dragonflye-style contig IDs"}},{"before":"47ed150915c97641477aee681db6da1976afcaf9","after":"112f3744965242af71e1c5011136a6f3199540d3","ref":"refs/heads/main","pushedAt":"2023-08-22T00:37:45.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Add uniqueness filters to avoid filename collisions (#24)\n\n* Add uniqueness filters to avoid filename collisions\r\n\r\n* Bump version","shortMessageHtmlLink":"Add uniqueness filters to avoid filename collisions (#24)"}},{"before":"c36d20c029d090878b05420e6cbcbcc3348a0e65","after":"09cd4c223ea1b68349b9e096e762b41abe2a1909","ref":"refs/heads/fix-provenance-filename-collision","pushedAt":"2023-08-22T00:37:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":null,"after":"c36d20c029d090878b05420e6cbcbcc3348a0e65","ref":"refs/heads/fix-provenance-filename-collision","pushedAt":"2023-08-22T00:34:29.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dfornika","name":"Dan Fornika","path":"/dfornika","primaryAvatarUrl":"https://github.com/avatars/u/145659?s=80&v=4"},"commit":{"message":"Add uniqueness filters to avoid filename collisions","shortMessageHtmlLink":"Add uniqueness filters to avoid filename collisions"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEatRCZQA","startCursor":null,"endCursor":null}},"title":"Activity ยท BCCDC-PHL/plasmid-screen"}